Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2019.00629

https://doi.org/10.3389/fgene.2019.00629

Single-Cell RNA Sequencing-Based Computational Analysis to Describe Disease Heterogeneity

Cited by: 23
Author(s): Tao Zeng, Hao Dai
Published: about 5 years ago

Software Mentions 10

bioconductor: Linnorm
Linear model and normality based normalization and transformation method (Linnorm)
Papers that mentioned: 11
bioconductor: MetaNeighbor
Single cell replicability analysis
Papers that mentioned: 11
bioconductor: Oscope
Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq
Papers that mentioned: 11
bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq data
Papers that mentioned: 34
bioconductor: SIMLR
Single-cell Interpretation via Multi-kernel LeaRning (SIMLR)
Papers that mentioned: 40
cran: FateID
Quantification of Fate Bias in Multipotent Progenitors
Papers that mentioned: 2
cran: SLICER
Selective Locally Linear Inference of Cellular Expression Relationships
Papers that mentioned: 26
cran: SparseDC
Implementation of SparseDC Algorithm
Papers that mentioned: 1
pypi: scmap
Assigns rgb colors to points on sphere.
Papers that mentioned: 34
pypi: SIMLR
Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning
Papers that mentioned: 40