Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1371/journal.pgen.1009065
https://doi.org/10.1371/journal.pgen.1009065
Cited by: 49
Author(s): Marco Galardini, Olivier Clermont, Agnès Baron, Bede P. Busby, Sara Dion, Sören Schubert, Pedro Beltrão, Erick Denamur
Published: over 3 years ago
Software Mentions 20
pypi: biopython
Freely available tools for computational molecular biology.Papers that mentioned: 114
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascriptPapers that mentioned: 1,819
pypi: eggnog-mapper
Fast functional annotation of novel sequences using eggNOG orthology assignments.Papers that mentioned: 41
pypi: pandas
Powerful data structures for data analysis, time series, and statisticsPapers that mentioned: 640
pypi: pyseer
Papers that mentioned: 17pypi: scikit-learn
A set of python modules for machine learning and data miningPapers that mentioned: 2,431
pypi: snakemake
Workflow management system to create reproducible and scalable data analysesPapers that mentioned: 45
pypi: staramr
Scans genome contigs against ResFinder, PlasmidFinder, and PointFinder databasesPapers that mentioned: 6