Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.12688/f1000research.9973.2
https://doi.org/10.12688/f1000research.9973.2
Cited by: 20
Author(s): Andrea Komljenović, Julien Roux, Julien Wollbrett, Marc Robinson‐Rechavi, Frederic Bastian
Published: almost 6 years ago
Software Mentions 33
bioconductor: AnnotationDbi
Manipulation of SQLite-based annotations in BioconductorPapers that mentioned: 73
bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSetPapers that mentioned: 1,962
bioconductor: BgeeDB
Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontologyPapers that mentioned: 4
bioconductor: BrainStars
Papers that mentioned: 6bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: IRanges
Foundation of integer range manipulation in BioconductorPapers that mentioned: 62
cran: matrixStats
Functions that Apply to Rows and Columns of Matrices (and to Vectors)Papers that mentioned: 46
cran: rsconnect
Deploy Docs, Apps, and APIs to 'Posit Connect', 'shinyapps.io', and 'RPubs'Papers that mentioned: 4
pypi: rsconnect
A small meta-package to install package to use with RStudio Connect.Papers that mentioned: 4