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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: bioconductor: BgeeDB

https://packages.ecosyste.ms/registries/bioconductor.org/packages/BgeeDB

Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology
1 version
Latest release: almost 2 years ago
2 dependent packages
15,168 downloads total

Enhanced Analysis
Repository Activity:
Repository Owner: BgeeDB (organization)
README Analysis: DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +16 Science terms in README
    8 scientific terms found in README
  • +10 DOI references
    1 DOI references found in README
Very Likely Science (100)

Papers Mentioning BgeeDB 4

10.12688/f1000research.9973.2
BgeeDB, an R package for retrieval of curated expression datasets and for gene list expression localization enrichment tests
Cited by: 20
Author(s): Andrea Komljenović, Julien Roux, Julien Wollbrett, Marc Robinson‐Rechavi, Frederic Bastian
Software Mentions: 33
Published: almost 7 years ago
10.1093/gigascience/giz022
Digital expression explorer 2: a repository of uniformly processed RNA sequencing data
Cited by: 41
Author(s): Mark Ziemann, Antony Kaspi, Assam El‐Osta
Software Mentions: 6
Published: over 6 years ago
10.1186/s12862-021-01833-6
The divergence of alternative splicing between ohnologs in teleost fishes
Cited by: 2
Author(s): Yuwei Wang, Baocheng Guo
Software Mentions: 2
Published: about 4 years ago
10.1093/database/bax087
Gold-standard ontology-based anatomical annotation in the CRAFT Corpus
Cited by: 3
Author(s): Michael Bada, Nicole Vasilevsky, William A. Baumgartner, Melissa Haendel, Lawrence Hunter
Software Mentions: 1
Published: over 8 years ago