Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13072-021-00390-y
https://doi.org/10.1186/s13072-021-00390-y
Cited by: 7
Author(s): Beoung Hun Lee, Suhn Kyong Rhie
Published: about 3 years ago
Software Mentions 21
bioconductor: ChIPseeker
ChIPseeker for ChIP peak Annotation, Comparison, and VisualizationPapers that mentioned: 161
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak DataPapers that mentioned: 217
bioconductor: FitHiC
Confidence estimation for intra-chromosomal contact mapsPapers that mentioned: 6
bioconductor: HiTC
High Throughput Chromosome Conformation Capture analysisPapers that mentioned: 21
bioconductor: methylKit
DNA methylation analysis from high-throughput bisulfite sequencing resultsPapers that mentioned: 154
bioconductor: multiHiCcompare
Normalize and detect differences between Hi-C datasets when replicates of each experimental condition are availablePapers that mentioned: 1
bioconductor: sesame
SEnsible Step-wise Analysis of DNA MEthylation BeadChipsPapers that mentioned: 2
cran: TopDom
An Efficient and Deterministic Method for Identifying Topological Domains in GenomesPapers that mentioned: 31
pypi: MAnorm
A robust model for quantitative comparison of ChIP-Seq data setsPapers that mentioned: 42