Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: FitHiC

https://packages.ecosyste.ms/registries/bioconductor.org/packages/FitHiC

Confidence estimation for intra-chromosomal contact maps
1 version
Latest release: about 1 year ago
10,279 downloads total

Papers Mentioning FitHiC 6

10.1186/s13072-021-00390-y
Molecular and computational approaches to map regulatory elements in 3D chromatin structure
Cited by: 7
Author(s): Beoung Hun Lee, Suhn Kyong Rhie
Software Mentions: 21
Published: almost 4 years ago
10.1186/s13059-020-02049-5
Molecular mechanisms of coronary disease revealed using quantitative trait loci for TCF21 binding, chromatin accessibility, and chromosomal looping
Cited by: 13
Author(s): Quanyi Zhao, Michael Dacre, Trieu Nguyen, Milos Pjanic, Boxiang Liu, Dharini Iyer, Paul Cheng, Robert Wirka, Juyong Brian Kim, Hunter B. Fraser, Thomas Quertermous
Software Mentions: 7
Published: over 4 years ago
10.1186/s13072-020-00348-6
HiCoP, a simple and robust method for detecting interactions of regulatory regions
Cited by: 8
Author(s): Yan Zhang, Zhaoqiang Li, Shasha Bian, Hao Zhao, Delong Feng, Yanhong Chen, Yuhe Hou, Qifa Liu, Bingtao Hao
Software Mentions: 3
Published: over 4 years ago
10.1093/bioinformatics/btab272
EnHiC: learning fine-resolution Hi-C contact maps using a generative adversarial framework
Cited by: 8
Author(s): Yue Hu, Wenxiu Ma
Software Mentions: 2
Published: over 3 years ago
10.3389/fgene.2021.645863
RNA Biogenesis Instructs Functional Inter-Chromosomal Genome Architecture
Cited by: 5
Author(s): Alessandro Bertero
Software Mentions: 2
Published: almost 4 years ago
10.1186/s12859-020-03841-7
Inferring chromosome radial organization from Hi-C data
Cited by: 7
Author(s): Priyojit Das, Tongye Shen, Rachel Patton McCord
Software Mentions: 1
Published: about 4 years ago