Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13059-020-02136-7
https://doi.org/10.1186/s13059-020-02136-7
Cited by: 53
Author(s): Pierre-Luc Germain, Anthony Sonrel, Mark D. Robinson
Published: over 3 years ago
Software Mentions 21
bioconductor: CellBench
Construct Benchmarks for Single Cell Analysis MethodsPapers that mentioned: 7
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: muscat
Multi-sample multi-group scRNA-seq data analysis toolsPapers that mentioned: 4
bioconductor: scater
Single-Cell Analysis Toolkit for Gene Expression Data in RPapers that mentioned: 79
bioconductor: scds
In-Silico Annotation of Doublets for Single Cell RNA Sequencing DataPapers that mentioned: 7
cran: sctransform
Variance Stabilizing Transformations for Single Cell UMI DataPapers that mentioned: 34
pypi: glmpca
Generalized PCA for dimension reduction of non-normally distributed dataPapers that mentioned: 3