Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: muscat

https://packages.ecosyste.ms/registries/bioconductor.org/packages/muscat

Multi-sample multi-group scRNA-seq data analysis tools
1 version
Latest release: about 1 year ago
14,191 downloads total

Papers Mentioning muscat 4

10.1186/s13059-020-02136-7

pipeComp, a general framework for the evaluation of computational pipelines, reveals performant single cell RNA-seq preprocessing tools
Cited by: 53
Author(s): Pierre-Luc Germain, Anthony Sonrel, Mark D. Robinson
Software Mentions: 21
Published: about 4 years ago

10.26508/lsa.202001004

CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data
Cited by: 21
Author(s): Almut Luetge, Joanna Zyprych-Walczak, Urszula Brykczynska Kunzmann, Helena L. Crowell, Daniela Calini, Dheeraj Malhotra, Charlotte Soneson, Mark D. Robinson
Software Mentions: 12
Published: over 3 years ago

10.3390/metabo10120513

Single-Cell Transcriptional Profiling of Mouse Islets Following Short-Term Obesogenic Dietary Intervention
Cited by: 12
Author(s): Annie R. Piñeros, Hongyu Gao, Wenting Wu, Yunlong Liu, Sarah A. Tersey, Raghavendra G. Mirmira
Software Mentions: 4
Published: almost 4 years ago

10.1523/ENEURO.0089-21.2021

Phenotypic Differences between the Alzheimer’s Disease-Related hAPP-J20 Model and Heterozygous<i>Zbtb20</i>Knock-Out Mice
Cited by: 7
Author(s): Daniel R. Gulbranson, Kaitlyn Ho, Gui-Qiu Yu, Xinxing Yu, Melanie Das, Eric Shao, Daniel Kim, Weiping J. Zhang, Krishna Choudhary, Reuben Thomas, Lennart Mucke
Software Mentions: 2
Published: over 3 years ago