Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.26508/lsa.202001004

https://doi.org/10.26508/lsa.202001004

CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data

Cited by: 21
Author(s): Almut Luetge, Joanna Zyprych-Walczak, Urszula Brykczynska Kunzmann, Helena L. Crowell, Daniela Calini, Dheeraj Malhotra, Charlotte Soneson, Mark D. Robinson
Published: over 3 years ago

Software Mentions 12

bioconductor: CellMixS
Evaluate Cellspecific Mixing
Papers that mentioned: 1
bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: countsimQC
Compare Characteristic Features of Count Data Sets
Papers that mentioned: 6
bioconductor: muscat
Multi-sample multi-group scRNA-seq data analysis tools
Papers that mentioned: 4
bioconductor: scater
Single-Cell Analysis Toolkit for Gene Expression Data in R
Papers that mentioned: 79
bioconductor: scDblFinder
scDblFinder
Papers that mentioned: 7
bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
bioconductor: SingleCellExperiment
S4 Classes for Single Cell Data
Papers that mentioned: 36
cran: cms
Calculate Medicare Reimbursement
Papers that mentioned: 1
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: cms
Eraple CMS (Content Management System)
Papers that mentioned: 1