An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1084/jem.20201795

https://doi.org/10.1084/jem.20201795

Diagnostic blood RNA profiles for human acute spinal cord injury

Cited by: 21
Author(s): Nikos Kyritsis, Abel Torres-Espín, Patrick G. Schupp, J. Russell Huie, Austin Chou, Xuan Duong Fernandez, Libby Thomas, Rachel Tsolinas, Debra D. Hemmerle, Lisa U. Pascual, Vineeta Singh, Jonathan Z. Pan, Jason F. Talbott, William D. Whetstone, John F. Burke, Anthony M DiGiorgio, Philip Weinstein, Geoffrey T. Manley, Sanjay S. Dhall, Adam R. Ferguson, Michael C. Oldham, Jacqueline C. Bresnahan, Michael S. Beattie
Published: over 4 years ago

Software Mentions 19

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: EnhancedVolcano
Publication-ready volcano plots with enhanced colouring and labeling
Papers that mentioned: 123
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: PCAtools
PCAtools: Everything Principal Components Analysis
Papers that mentioned: 20
Very Likely Science (100)
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
Very Likely Science (100)
bioconductor: VennDetail
A package for visualization and extract details
Papers that mentioned: 3
Very Likely Science (100)
cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
Very Likely Science (83)
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
Very Likely Science (100)
cran: ggdendro
Create Dendrograms and Tree Diagrams Using 'ggplot2'
Papers that mentioned: 48
Very Likely Science (77)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
Very Likely Science (100)
cran: glmnetUtils
Utilities for 'Glmnet'
Papers that mentioned: 3
Very Likely Science (75)
cran: magick
Advanced Graphics and Image-Processing in R
Papers that mentioned: 21
Very Likely Science (93)
cran: rgl
3D Visualization Using OpenGL
Papers that mentioned: 156
Very Likely Science (100)
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
Very Likely Science (100)
cran: table1
Tables of Descriptive Statistics in HTML
Papers that mentioned: 6
Very Likely Science (85)
pypi: fisher
Fast Fisher's Exact Test
Papers that mentioned: 21
Very Likely Science (100)
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
Very Likely Science (100)
pypi: magick
C-based Python Interface to ImageMagick
Papers that mentioned: 21
Very Likely Science (65)