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Papers: 10.1038/s42003-019-0554-8

https://doi.org/10.1038/s42003-019-0554-8

Single-cell landscape in mammary epithelium reveals bipotent-like cells associated with breast cancer risk and outcome

Cited by: 37
Author(s): Weiyan Chen, Samuel Morabito, Kai Kessenbrock, Tariq Enver, Kerstin B. Meyer, Andrew E. Teschendorff
Published: about 7 years ago

Software Mentions 14

bioconductor: destiny
Creates diffusion maps
Papers that mentioned: 18
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Papers that mentioned: 60
Very Likely Science (100)
bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
Very Likely Science (100)
cran: dbscan
Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms
Papers that mentioned: 49
Very Likely Science (100)
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
Very Likely Science (100)
cran: mclust
Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
Papers that mentioned: 297
Very Likely Science (85)
cran: tsne
T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
Papers that mentioned: 26
Very Likely Science (75)
pypi: dbscan
Theoretically efficient and practical parallel DBSCAN
Papers that mentioned: 49
Very Likely Science (100)
pypi: destiny
Papers that mentioned: 18
Very Likely Science (65)
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
Very Likely Science (100)
pypi: monocle
An async programming framework with a blocking look-alike syntax
Papers that mentioned: 60
Very Likely Science (100)
pypi: Pathway
Pathway is a data processing framework which takes care of streaming data updates for you.
Papers that mentioned: 827
Very Likely Science (75)
pypi: tsne
TSNE algorithms
Papers that mentioned: 26
Very Likely Science (96)