Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1016/j.molcel.2021.05.023
https://doi.org/10.1016/j.molcel.2021.05.023
Cited by: 87
Author(s): Wael Kamel, Marko Noerenberg, Berati Cerikan, Honglin Chen, Aino I Järvelin, Mohamed Kammoun, Young Seok Lee, Shuai Ni, Manuel García-Moreno, Anna Andrejeva, Michael J. Deery, Natasha Johnson, Christopher J Neufeldt, Mirko Cortese, Michael Knight, Kathryn S. Lilley, Javier Martı̂nez, Ilan Davis, Ralf Bartenschlager, Shabaz Mohammed, Alfredo Castelló
Published: about 3 years ago
Software Mentions 18
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignmentsPapers that mentioned: 134
bioconductor: GenomicRanges
Representation and manipulation of genomic intervalsPapers that mentioned: 323
bioconductor: IRanges
Foundation of integer range manipulation in BioconductorPapers that mentioned: 62
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browserPapers that mentioned: 107
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: ggrepel
Automatically Position Non-Overlapping Text Labels with 'ggplot2'Papers that mentioned: 164