Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: tadpole

https://packages.ecosyste.ms/registries/pypi.org/packages/tadpole

flask starter, support gunicorn start,stop,reload script and restful view , auto restful sqlalchemy model, auth and permission
11 versions
Latest release: almost 7 years ago
13 downloads last month

Papers Mentioning tadpole 5

Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments
Cited by: 124
Author(s): Erik L. Clarke, Louis J. Taylor, Chunyu Zhao, Andrew Jesse Connell, Jung‐Jin Lee, Bryton Fett, Frederic D. Bushman, Kyle Bittinger
Software Mentions: 11
Published: over 5 years ago

10.7717/peerj.6902

Optimizing <i>de novo</i> genome assembly from PCR-amplified metagenomes
Cited by: 26
Author(s): Simon Roux, Gareth Trubl, Danielle Goudeau, Nandita Nath, Estelle Couradeau, Nathan A. Ahlgren, Yuanchao Zhan, David Marsan, Feng Chen, Jed A. Fuhrman, Trent Northen, Matthew B. Sullivan, V. I. Rich, Rex R. Malmstrom, Emiley A. Eloe‐Fadrosh
Software Mentions: 7
Published: over 5 years ago

10.1186/s13059-021-02426-8

Haploflow: strain-resolved de novo assembly of viral genomes
Cited by: 15
Author(s): Adrian Fritz, Andreas Bremges, Zhi-Luo Deng, Till Robin Lesker, Jasper Götting, Tina Ganzenmueller, Alexander Sczyrba, Alexander Dilthey, Frank Klawonn, Alice C. McHardy
Software Mentions: 5
Published: about 3 years ago

10.1101/2021.01.25.428049

Haploflow: Strain-resolved <i>de novo</i> assembly of viral genomes
Cited by: 3
Author(s): Adrian Fritz, Andreas Bremges, Zhi-Luo Deng, Till Robin Lesker, Jasper Götting, Tina Ganzenmüller, Alexander Sczyrba, Alexander Dilthey, Frank Klawonn, Alice C. McHardy
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2020.00549

Systematic Evaluation of Whole Genome Sequence-Based Predictions of Salmonella Serotype and Antimicrobial Resistance
Cited by: 45
Author(s): Ashley Cooper, Andrew Low, Adam Koziol, Matthew C. Thomas, Daniel Leclair, Sandeep Tamber, Alex Wong, Burton W. Blais, Catherine D. Carrillo
Software Mentions: 3
Published: over 4 years ago