Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.6902

https://doi.org/10.7717/peerj.6902

Optimizing <i>de novo</i> genome assembly from PCR-amplified metagenomes

Cited by: 26
Author(s): Simon Roux, Gareth Trubl, Danielle Goudeau, Nandita Nath, Estelle Couradeau, Nathan A. Ahlgren, Yuanchao Zhan, David Marsan, Feng Chen, Jed A. Fuhrman, Trent Northen, Matthew B. Sullivan, V. I. Rich, Rex R. Malmstrom, Emiley A. Eloe‐Fadrosh
Published: over 5 years ago

Software Mentions 7

cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: RColorBrewer
ColorBrewer Palettes
Papers that mentioned: 490
pypi: diamond
Smart data producer for graphite graphing package
Papers that mentioned: 68
pypi: script
Help for writing shell scripts in Python
Papers that mentioned: 575
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213
pypi: tadpole
flask starter, support gunicorn start,stop,reload script and restful view , auto restful sqlalchemy model, auth and permission
Papers that mentioned: 5