Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: scTDA

https://packages.ecosyste.ms/registries/pypi.org/packages/scTDA

An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data
2 versions
Latest release: over 7 years ago
9 downloads last month

Papers Mentioning scTDA 4

The impact of single-cell RNA sequencing on understanding the functional organization of the immune system
Cited by: 15
Author(s): Péter Végh, Muzlifah Haniffa
Software Mentions: 7
Published: almost 7 years ago

10.1016/j.gpb.2018.07.007

Deciphering Brain Complexity Using Single-cell Sequencing
Cited by: 50
Author(s): Quanhua Mu, Yiyun Chen, Jiguang Wang
Software Mentions: 7
Published: over 5 years ago

10.1002/cam4.2996

Molecular natural history of breast cancer: Leveraging transcriptomics to predict breast cancer progression and aggressiveness
Cited by: 6
Author(s): Daniel Cook, Jonatan Kallus, Rebecka Jörnsten, Jens Nielsen
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pcbi.1007644

Inferring TF activation order in time series scRNA-Seq studies
Cited by: 9
Author(s): Chieh Hubert Lin, Jun Ding, Ziv Bar‐Joseph
Software Mentions: 1
Published: almost 5 years ago