Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.gpb.2018.07.007

https://doi.org/10.1016/j.gpb.2018.07.007

Deciphering Brain Complexity Using Single-cell Sequencing

Cited by: 50
Author(s): Quanhua Mu, Yiyun Chen, Jiguang Wang
Published: about 5 years ago

Software Mentions 7

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: SingleR
Reference-Based Single-Cell RNA-Seq Annotation
Papers that mentioned: 97
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: Harmony
Harmony Programming Language
Papers that mentioned: 504
pypi: PhenoGraph
Graph-based clustering for high-dimensional single-cell data
Papers that mentioned: 96
pypi: scScope
scScope is a deep-learning based approach for single cell RNA-seq analysis.
Papers that mentioned: 7
pypi: scTDA
An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data
Papers that mentioned: 4