Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: scScope

https://packages.ecosyste.ms/registries/pypi.org/packages/scScope

scScope is a deep-learning based approach for single cell RNA-seq analysis.
4 versions
Latest release: about 6 years ago
15 downloads last month

Papers Mentioning scScope 7

10.1186/s13059-020-02132-x
A systematic evaluation of single-cell RNA-sequencing imputation methods
Cited by: 156
Author(s): Wenpin Hou, Zhicheng Ji, Hongkai Ji, Stephanie Hicks
Software Mentions: 15
Published: about 4 years ago
10.1186/s13059-019-1898-6
Accuracy, robustness and scalability of dimensionality reduction methods for single-cell RNA-seq analysis
Cited by: 123
Author(s): Shuang Sun, Jiaqiang Zhu, Ying Ma, Xiang Zhou
Software Mentions: 13
Published: almost 5 years ago
10.1186/s13059-020-02083-3
DISC: a highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learning
Cited by: 23
Author(s): Yong He, Hao Yuan, Changbao Wu, Zhi Xie
Software Mentions: 9
Published: over 4 years ago
10.3389/fgene.2020.00295
Single-Cell Transcriptome Data Clustering via Multinomial Modeling and Adaptive Fuzzy K-Means Algorithm
Cited by: 13
Author(s): Liang Chen, Weinan Wang, Yuyao Zhai, Minghua Deng
Software Mentions: 8
Published: over 4 years ago
10.1016/j.gpb.2018.07.007
Deciphering Brain Complexity Using Single-cell Sequencing
Cited by: 50
Author(s): Quanhua Mu, Yiyun Chen, Jiguang Wang
Software Mentions: 7
Published: over 5 years ago
10.3389/fgene.2020.00786
NeuralEE: A GPU-Accelerated Elastic Embedding Dimensionality Reduction Method for Visualizing Large-Scale scRNA-Seq Data
Cited by: 2
Author(s): Jiankang Xiong, Fuzhou Gong, Lin Wan, Liang Ma
Software Mentions: 3
Published: about 4 years ago