pypi: package | Projects | Ecosyste.ms: Papers

10.1038/s41598-017-14791-1

Molecular Insights into Antimicrobial Resistance Traits of Multidrug Resistant Enteric Pathogens isolated from India
Cited by: 30
Author(s): Promod Kumar, Satyabrata Bag, Tarini Shankar Ghosh, Prasanta Kumar Dey, Mayanka Dayal, Bipasa Saha, Jyoti Verma, Archana Pant, Shruti Saxena, Anbumani Desigamani, Preety Rana, Dhirendra Kumar, Neetu Sharma, Pranita Hanpude, Tushar Kanti Maiti, Asish K. Mukhopadhyay, Rupak K. Bhadra, G. Balakrish Nair, Thandavarayan Ramamurthy, Bhabatosh Das
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijerph17072587

Accumulated Long-Term Exposure to Workplace Bullying Impairs Psychological Hardiness: A Five-Year Longitudinal Study among Nurses
Cited by: 11
Author(s): Kristina Vaktskjold Hamre, Ståle Einarsen, Øystein Løvik Hoprekstad, Ståle Pallesen, Bjørn Bjorvatn, Siri Waage, Bente E. Moen, Anette Harris
Software Mentions: 1
Published: over 6 years ago

10.1038/ismej.2016.47

Genetic and life-history traits associated with the distribution of prophages in bacteria
Cited by: 268
Author(s): Marie Touchon, Aude Bernheim, Eduardo P. C. Rocha
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-017-18276-z

Active State Organization of Spontaneous Behavioral Patterns
Cited by: 12
Author(s): Christopher Hillar, G. Onnis, Darren Rhea, Laurence H. Tecott
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-21695-1

Matched case-control study of the influence of inland waters surrounding poultry farms on avian influenza outbreaks in Japan
Cited by: 9
Author(s): Yumiko Shimizu, Yoko Hayama, Takehisa Yamamoto, Kiyokazu Murai, Toshiyuki Tsutsui
Software Mentions: 1
Published: over 8 years ago

10.3390/ijerph17082750

Naive Forecast for COVID-19 in Utah Based on the South Korea and Italy Models-the Fluctuation between Two Extremes
Cited by: 15
Author(s): Fares Qeadan, Trenton Honda, Lisa H. Gren, Jennifer Dailey-Provost, L. Scott Benson, James VanDerslice, Christina A. Porucznik, Abigail Waters, Sajni Lacey, Kimberley Shoaf
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-23044-8

3.4 million real-world learning management system logins reveal the majority of students experience social jet lag correlated with decreased performance
Cited by: 43
Author(s): Benjamin L. Smarr, Aaron E. Schirmer
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-019-5839-2

Genome-wide identification and characterization of ABA receptor PYL/RCAR gene family reveals evolution and roles in drought stress in Nicotiana tabacum
Cited by: 32
Author(s): Ge Bai, He Xie, Huaiying Yao, Liang Feng, Xuejun Chen, Yihan Zhang, Bingguan Xiao, Jun Yang, Yongping Li, Da-Hai Yang
Software Mentions: 1
Published: about 7 years ago

10.1186/1756-9966-33-49

A 41-gene signature derived from breast cancer stem cells as a predictor of survival
Cited by: 24
Author(s): Zhiqiang Yin, Jing Liu, Yingchun Xu, Jian Yu, Guohui Ding, Feng Yang, Lei Tang, Baohong Liu, Yue Ma, Yuwei Xia, Xiaolin Lin, Hongxia Wang
Software Mentions: 1
Published: about 12 years ago

10.1038/s41598-018-26000-8

Novel internal regulators and candidate miRNAs within miR-379/miR-656 miRNA cluster can alter cellular phenotype of human glioblastoma
Cited by: 22
Author(s): Subhashree Nayak, Meghali Aich, Anupam Kumar, Suman Sengupta, Prajakta Bajad, Parashar Dhapola, Deepanjan Paul, Kiran Narta, Suvendu Purkrait, Bharati Mehani, Ashish Suri, Debojyoti Chakraborty, Arijit Mukhopadhyay, Chitra Sarkar
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-021-07607-0

Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces
Cited by: 37
Author(s): Anna Cuscó, Daniel Catalá Pérez, Joaquim Viñes, Norma Fàbregas, Olga Francino
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-12-316

Comparative genomics of Escherichia coli isolated from patients with inflammatory bowel disease
Cited by: 44
Author(s): Rebecca Munk Vejborg, Viktoria Hancock, Andreas Munk Petersen, Karen A. Krogfelt, Per Klemm
Software Mentions: 1
Published: about 15 years ago

10.1186/1471-2164-6-62

In vitro identification and in silico utilization of interspecies sequence similarities using GeneChip® technology
Cited by: 38
Author(s): Dmitry N. Grigoryev, Shwu Fan, Brett A. Simon, Rafael A. Irizarry, Shui Q. Ye, Joe G.N. Garcia
Software Mentions: 1
Published: over 21 years ago

10.1186/s12864-016-3056-9

Comparative genomics reveals Lysinibacillus sphaericus group comprises a novel species
Cited by: 16
Author(s): Camilo Gómez-Garzón, Alejandra Hernández-Santana, Jenny Dussán
Software Mentions: 1
Published: almost 10 years ago

10.1186/1471-2164-13-S7-S17

MicroRNA-centric measurement improves functional enrichment analysis of co-expressed and differentially expressed microRNA clusters
Cited by: 10
Author(s): Su Yeon Lee, Kyung-Ah Sohn, Ju Han Kim
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-13-594

Molecular evidence for the bi-clonal origin of neuroendocrine tumor derived metastases
Cited by: 14
Author(s): Beate Rinner, Birgit Gallè, Slave Trajanoski, Carina Fischer, Martina Hatz, Theresa Maierhofer, Gabriele Michelitsch, Farid Moinfar, Ingeborg Stelzer, Roswitha Pfragner, Christian Godballe
Software Mentions: 1
Published: almost 14 years ago

10.1002/ajmg.a.36017

Confirmation of <i>GRHL2</i> as the gene for the DFNA28 locus
Cited by: 39
Author(s): Barbara Vona, Indrajit Nanda, Cordula Neuner, Tobias Müller, Thomas Haaf
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0176951

Surface reflectance drives nest box temperature profiles and thermal suitability for target wildlife
Cited by: 34
Author(s): Stephen R. Griffiths, Jessica A. Rowland, Natalie J. Briscoe, Pia E. Lentini, Kathrine A. Handasyde, Linda F. Lumsden, Kylie A. Robert
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0233397

Geographical variations in cancer mortality and social inequalities in southern Spain (Andalusia). 2002-2013
Cited by: 10
Author(s): Vanessa Santos-Sánchez, Juan Antonio Córdoba-Doña, Francisco Viciana, Antonio Escolar-Pujolar, Lucia Pozzi, Rebeca Ramis
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-40058-y

Identification of novel population clusters with different susceptibilities to type 2 diabetes and their impact on the prediction of diabetes
Cited by: 18
Author(s): Seongbeom Cho, Sang Cheol Kim, Myung Guen Chung
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0071916

Taxonomic and Life History Bias in Herbicide Resistant Weeds: Implications for Deployment of Resistant Crops
Cited by: 26
Author(s): Jodie S. Holt, Shana R. Welles, Katia Silvera, Ian Heap, Sylvia M. Heredia, Alejandra Martínez‐Berdeja, Kai T. Palenscar, Lynn C. Sweet, Norman C. Ellstrand
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0161306

A Cytokine Signalling Network for the Regulation of Inducible Nitric Oxide Synthase Expression in Rheumatoid Arthritis
Cited by: 59
Author(s): Poulami Dey, Venugopal Panga, Srivatsan Raghunathan
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12864-016-3338-2

Carbohydrate metabolism in Oenococcus oeni: a genomic insight
Cited by: 17
Author(s): Alice Cibrario, Claire Peanne, Marine Lailheugue, Hugo Campbell-Sills, Marguerite Dols‐Lafargue
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0104241

Population Genomics of the Fission Yeast Schizosaccharomyces pombe
Cited by: 44
Author(s): Jeffrey A. Fawcett, Tetsushi Iida, Shohei Takuno, Ryuichi P. Sugino, Tomoyuki Kado, Kazuto Kugou, Sachiko Mura, Takehiko Kobayashi, Kunihiro Ohta, Jun‐ichi Nakayama, Hideki Innan
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0194889

Statistical and Machine Learning forecasting methods: Concerns and ways forward
Cited by: 721
Author(s): Spyros Makridakis, Evangelos Spiliotis, Vassilios Assimakopoulos
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0095413

Overrepresentation of Glutamate Signaling in Alzheimer's Disease: Network-Based Pathway Enrichment Using Meta-Analysis of Genome-Wide Association Studies
Cited by: 48
Author(s): Eduardo Pérez‐Palma, Bernabé I. Bustos, Camilo Villamán, Marcelo Alarcón, Miguel E. Ávila, Giorgia D. Ugarte, Ariel E. Reyes, Carlos Opazo, Giancarlo V. De Ferrari
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0041528

Advanced Methylome Analysis after Bisulfite Deep Sequencing: An Example in Arabidopsis
Cited by: 19
Author(s): Huy Q. Dinh, Manu Dubin, Fritz J. Sedlazeck, Nicole Lettner, Ortrun Mittelsten Scheid, Arndt von Haeseler
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0062233

DNA Methylation Profile Distinguishes Clear Cell Sarcoma of the Kidney from Other Pediatric Renal Tumors
Cited by: 21
Author(s): Hikaru Ueno, Hajime Okita, Shingo Akimoto, Kenichiro Kobayashi, Kazuhiko Nakabayashi, Kenichiro Hata, Junichiro Fujimoto, Jun Ichi Hata, Masahiro Fukuzawa, Nobutaka Kiyokawa
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0044043

Cost per QALY (Quality-Adjusted Life Year) and Lifetime Cost of Prolonged Mechanical Ventilation in Taiwan
Cited by: 21
Author(s): Mei Hung, Hsin Ming Lu, Likwang Chen, Mingxiang Lin, Cheng Ren Chen, Chong‐Jen Yu, Jung‐Der Wang
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0083720

QTL Map Meets Population Genomics: An Application to Rice
Cited by: 9
Author(s): Jeffrey A. Fawcett, Tomoyuki Kado, Eriko Sasaki, Shohei Takuno, Kentaro Yoshida, Ryuichi P. Sugino, Shunichi Kosugi, Satoshi Natsume, Chikako Mitsuoka, Aiko Uemura, Hiroki Takagi, Akira Abe, Takashige Ishii, Hideki Innan
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0097562

Genetic Diversity of Circulating Rotavirus Strains in Tanzania Prior to the Introduction of Vaccination
Cited by: 35
Author(s): Sabrina John Moyo, Bjørn Blomberg, Kurt Hanevik, Øyvind Kommedal, M Kirsti Vainio, Samuel Y Maselle, Nina Langeland
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0044397

Genetical Genomics Identifies the Genetic Architecture for Growth and Weevil Resistance in Spruce
Cited by: 23
Author(s): Ilga Porth, Richard Allen White, Barry Jaquish, René I. Alfaro, Carol Ritland, Kermit Ritland
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0181135

The association between ethnicity and vaginal microbiota composition in Amsterdam, the Netherlands
Cited by: 113
Author(s): Hanneke Borgdorff, Charlotte van der Veer, Robin van Houdt, Catharina J. Alberts, Henry Jc de Vries, Sylvia M. Bruisten, Marieke B. Snijder, Maria Prins, Suzanne E. Geerlings, Maarten F. Schim van der Loeff, Janneke van de Wijgert
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0184400

Sources of pain in laparoendoscopic gynecological surgeons: An analysis of ergonomic factors and proposal of an aid to improve comfort
Cited by: 7
Author(s): Sa Ra Lee, Sunah Shim, Taeri Yu, Kyoung Sook Jeong, Hye Won Chung
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0170778

Skin Autofluorescence and Subclinical Atherosclerosis in Mild to Moderate Chronic Kidney Disease: A Case-Control Study
Cited by: 13
Author(s): Enric Sánchez, Àngels Betriu, David Arroyo, Carolina Martínez López, Marta Hernández, Ferrán Rius, Elvira Fernández, Albert Lecube
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0207878

Periods of high dengue transmission defined by rainfall do not impact efficacy of dengue vaccine in regions of endemic disease
Cited by: 4
Author(s): Chloé Pasin, M. Elizabeth Halloran, Peter B. Gilbert, Edith Langevin, R. Leon Ochiai, Punnee Pitisuttithum, María Rosario Capeding, Gabriel Carrasquilla, Carina Frago, Margarita Cortés, Laurent Chambonneau, Zoe Moodie
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0041361

Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility
Cited by: 857
Author(s): Lovisa E. Reinius, Nathalie Acevedo, Maaike Joerink, Göran Pershagen, Sven-Erik Dahlén, Dario Greco, Cilla Söderhäll, Annika Scheynius, Juha Kere
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0075880

Deployment and Post-Deployment Experiences in OEF/OIF Veterans: Relationship to Gray Matter Volume
Cited by: 14
Author(s): Robin L. Aupperle, Colm G. Connolly, Ashley N. Stillman, April C. May, Martin P. Paulus
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0032890

Evidence for a Trade-Off Strategy in Stone Oak (Lithocarpus) Seeds between Physical and Chemical Defense Highlights Fiber as an Important Antifeedant
Cited by: 28
Author(s): Xi Chen, Charles H. Cannon, Nancy Lou Conklin-Brittan
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0111392

Methane-Derived Carbon in the Benthic Food Web in Stream Impoundments
Cited by: 5
Author(s): John Gichimu Mbaka, Celia Somlai, Denis Köpfer, Andreas Maeck, Andreas Lorke, Ralf B. Schäfer
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0002196

Evidence for Over-Dispersion in the Distribution of Clinical Malaria Episodes in Children
Cited by: 56
Author(s): Tabitha Mwangi, Greg Fegan, Thomas N. Williams, Sam Kinyanjui, Robert W. Snow, Kevin Marsh
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.pone.0104696

Successful Non-Surgical Deep Uterine Transfer of Porcine Morulae after 24 Hour Culture in a Chemically Defined Medium
Cited by: 45
Author(s): H. Rodríguez‐Martínez, Miguel Ángel, C. Cuello, J. Sánchez-Osorio, J. Gomis, Inmaculada Parrilla, Jordi Vilà, Ignaci Colina, Mònica Dı́az, Josep Peñuelas i Reixach, José Luís Vázquez, Juan M. Vázquez, Jordi Roca, M.A. Gil
Software Mentions: 1
Published: about 12 years ago

10.1111/acel.12608

Identification of tissue-specific transcriptional markers of caloric restriction in the mouse and their use to evaluate caloric restriction mimetics
Cited by: 41
Author(s): Jamie L. Barger, James M. Vann, Nicole Cray, Thomas D. Pugh, Angela Mastaloudis, Shelly N. Hester, Steven Wood, Michael A. Newton, Richard Weindruch, Tomas A. Prolla
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0185005

Molecular population genetics of the Polycomb genes in Drosophila subobscura
Cited by: 0
Author(s): Juan M. Calvo-Martín, Montserrat Papaceit, Carmen Segarra
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0070903

Genome-Wide Association Study Identifies a Novel Canine Glaucoma Locus
Cited by: 23
Author(s): Saija Ahonen, Elina Maria Pietilä, Cathryn S. Mellersh, Katriina Tiira, Liz Hansen, Gary S. Johnson, Hannes Lohi
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0042855

Generation of Induced Pluripotent Stem Cells from Human Nasal Epithelial Cells Using a Sendai Virus Vector
Cited by: 45
Author(s): Manabu Ono, Yuko Hamada, Yasue Horiuchi, Mami Matsuo-Takasaki, Yoshimasa Imoto, Kaishi Satomi, Tadao Arinami, Mamoru Hasegawa, Tsuyoshi Fujioka, Yukio Nakamura, Emiko Noguchi
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0015644

Candidate Genes Detected in Transcriptome Studies Are Strongly Dependent on Genetic Background
Cited by: 37
Author(s): Pernille Sarup, Jesper Givskov Sørensen, Torsten Nygaard Kristensen, Ary A. Hoffmann, Volker Loeschcke, Ken N. Paige, Peter Sørensen
Software Mentions: 1
Published: over 15 years ago

10.1002/jev2.12064

Molecular and functional profiling of apical versus basolateral small extracellular vesicles derived from primary human proximal tubular epithelial cells under inflammatory conditions
Cited by: 13
Author(s): Xiangju Wang, Rachel Wilkinson, Katrina Kildey, Jacobus Ungerer, Michelle M. Hill, Alok K. Shah, Ahmed Mohamed, Mriga Dutt, Jeffrey Molendijk, Helen Healy, Andrew J. Kassianos
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0016831

Investigating the Potential Role of Genetic and Epigenetic Variation of DNA Methyltransferase Genes in Hyperplastic Polyposis Syndrome
Cited by: 9
Author(s): Musa Drini, Nicholas C. Wong, Hamish S. Scott, Jeffrey M Craig, Alexander Dobrovic, Chelsee Hewitt, Dow Christofer, Joanne Young, Mark A. Jenkins, Richard Saffery, Finlay Macrae
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0008695

Magnitude of Stratification in Human Populations and Impacts on Genome Wide Association Studies
Cited by: 13
Author(s): Ke-Ke Hao, Eugene Chudin, Danielle M. Greenawalt, Eric E. Schadt
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0089860

A Data-Driven Algorithm Integrating Clinical and Laboratory Features for the Diagnosis and Prognosis of Necrotizing Enterocolitis
Cited by: 40
Author(s): Jun Ji, Xuefeng B. Ling, Yue Zhao, Zhongkai Hu, Xiaolin Zheng, Zhening Xu, Qiaojun Wen, Zachary J. Kastenberg, Ping Li, Fizan Abdullah, Mary L. Brandt, Richard A. Ehrenkranz, Mary Catherine Harris, Timothy C. Lee, B. Joyce Simpson, Corinna Bowers, Richard L. Moss, Karl G. Sylvester
Software Mentions: 1
Published: over 12 years ago

10.1186/s12864-015-1563-8

Ribosome profiling reveals translation control as a key mechanism generating differential gene expression in Trypanosoma cruzi
Cited by: 104
Author(s): Pablo Smircich, Guillermo Eastman, Saloê Bispo, Marı́a Ana Duhagon, Eloise Pavão Guerra-Slompo, Beatríz Garat, Samuel Goldenberg, David J. Munroe, Bruno Dallagiovanna, Fabíola Holetz, José Sotelo‐Silveira
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0070509

Identification of a Novel Bacterial Outer Membrane Interleukin-1Β-Binding Protein from Aggregatibacter actinomycetemcomitans
Cited by: 22
Author(s): Annamari Paino, Tuuli Ahlstrand, Jari Nuutila, Indre Navickaite, Maria Lahti, Heidi Tuominen, Hannamari Välimaa, Urpo Lamminmäki, Marja Pöllänen, Riikka Ihalin
Software Mentions: 1
Published: about 13 years ago

10.1038/s41598-019-46398-z

Whole genome sequencing of amplified Plasmodium knowlesi DNA from unprocessed blood reveals genetic exchange events between Malaysian Peninsular and Borneo subpopulations
Cited by: 26
Author(s): Ernest Diez Benavente, Ana Gomes, Jeremy Ryan De Silva, Matthew J. Grigg, Harriet Walker, Bridget E. Barber, Timothy William, Tsin Wen Yeo, Paola Flórez de Sessions, Abhinay Ramaprasad, Amy Ibrahim, James Charleston, Martin L. Hibberd, Arnab Pain, Robert W. Moon, Sarah Auburn, Yee Ling Lau, Nicholas M. Anstey, Taane G. Clark, Susana Campino
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0064238

The Hot Pepper (Capsicum annuum) MicroRNA Transcriptome Reveals Novel and Conserved Targets: A Foundation for Understanding MicroRNA Functional Roles in Hot Pepper
Cited by: 51
Author(s): Dong-Gyu Hwang, June Hyun Park, Jae Yun Lim, Dong-Hyun Kim, Yourim Choi, Soyoung Kim, Gregory Reeves, Seon-In Yeom, Jeong-Soo Lee, Minkyu Park, Seungill Kim, Ik‐Young Choi, Doil Choi, Chanseok Shin
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0030820

STAT3 Is Activated by JAK2 Independent of Key Oncogenic Driver Mutations in Non-Small Cell Lung Carcinoma
Cited by: 103
Author(s): Brendan D. Looyenga, Danielle Hutchings, Irene Cherni, Chris Kingsley, Glen J. Weiss, Jeffrey P. MacKeigan
Software Mentions: 1
Published: over 14 years ago

10.1186/1471-2164-10-385

Microbial comparative pan-genomics using binomial mixture models
Cited by: 94
Author(s): Lars Snipen, Trygve Almøy, David W. Ussery
Software Mentions: 1
Published: over 17 years ago

10.1371/journal.pone.0165619

Structural Patterns under X-Rays: Is SNOMED CT Growing Straight?
Cited by: 5
Author(s): Pablo López-García, Stefan Schulz
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-019-46804-6

Neurotoxicity of organophosphate pesticides could reduce the ability of fish to escape predation under low doses of exposure
Cited by: 46
Author(s): Natalia Ivone Sandoval-Herrera, Freylan Mena, Mario Espinoza, Adarli Romero
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0044234

Genetic Factors Control Nicotine Self-Administration in Isogenic Adolescent Rat Strains
Cited by: 33
Author(s): Hao Chen, Katie A. Hiler, Elizabeth A. Tolley, Shannon G. Matta, Burt M. Sharp
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0229943

A novel seed treatment-based multiplication approach for cassava planting material
Cited by: 5
Author(s): Eder Jorge de Oliveira, S. A. S. de Oliveira, Caroline Otto, Titus Alicai, Juan Paulo Xavier de Freitas, Diego Fernando Marmolejo Cortes, Anthony Pariyo, Charles Liri, Gerald Adiga, Andrea Balmer, Dominik Klauser, Mike Robinson
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0218654

Delivering community-led integrated HIV and sexual and reproductive health services for sex workers: A mixed methods evaluation of the DIFFER study in Mysore, South India
Cited by: 10
Author(s): Sushena Reza-Paul, Lisa Lazarus, Raviprakash Maiya, K T Venukumar, Bhagya Lakshmi, Anuradha Roy, Partha Haldar, M Andina, Yves Lafort, Robert Lorway
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0104172

Transient Overexposure of Neuregulin 3 during Early Postnatal Development Impacts Selective Behaviors in Adulthood
Cited by: 33
Author(s): Clare Paterson, Amanda J. Law
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0152760

Protection against SHIV Challenge by Subcutaneous Administration of the Plant-Derived PGT121 Broadly Neutralizing Antibody in Macaques
Cited by: 11
Author(s): Yvonne J. Rosenberg, David C. Montefiori, Celia C. LaBranche, Mark G. Lewis, Markus Sack, Jonathan Lees, Xiaoming Jiang
Software Mentions: 1
Published: over 10 years ago

10.18632/aging.101990

CA-30, an oligosaccharide fraction derived from Liuwei Dihuang decoction, ameliorates cognitive deterioration via the intestinal microbiome in the senescence-accelerated mouse prone 8 strain
Cited by: 21
Author(s): Jianhui Wang, Lei Xi, Zhitao Xie, Xiaorui Zhang, Xiaorui Cheng, Wenxia Zhou, Yongxiang Zhang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0141697

Characterising Uncertainty in Expert Assessments: Encoding Heavily Skewed Judgements
Cited by: 3
Author(s): Rebecca A. O’Leary, Samantha Low‐Choy, Rebecca Fisher, Kerrie Mengersen, M. Julian Caley
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0211758

Tweeting about public health policy: Social media response to the UK Government’s announcement of a Parliamentary vote on draft standardised packaging regulations
Cited by: 15
Author(s): Jenny Hatchard, João Quariguasi Frota Neto, Christos Vasilakis, Karen Evans-Reeves
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-017-4162-z

eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria
Cited by: 4
Author(s): Nobuaki Kono, Masaru Tomita, Kazuharu Arakawa
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0216928

Transcriptional changes associated with advancing stages of heart failure underlie atrial and ventricular arrhythmogenesis
Cited by: 2
Author(s): Mariana Argenziano, Michael Xavier Doss, Megan Tabler, Agapios Sachinidis, Charles Antzelevitch
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0007155

Identification by Automated Screening of a Small Molecule that Selectively Eliminates Neural Stem Cells Derived from hESCs but Not Dopamine Neurons
Cited by: 38
Author(s): Yi Han, Aaron W. Miller, Julie Mangada, Ying Liu, Andrzej Swistowski, Ming Zhan, Mahendra S. Rao, Xianmin Zeng
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0194571

Detection of sister-species in invasive populations of the fall armyworm Spodoptera frugiperda (Lepidoptera: Noctuidae) from Uganda
Cited by: 76
Author(s): Michael Otim, Wee Tek Tay, Tom Walsh, Dalton Kanyesigye, Stella Adumo, Joseph Abongosi, Stephen Ochen, Julius Pyton Sserumaga, Simon Alibu, Grace Abalo, Godfrey Asea, A. Agona
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0156096

Evaluation of the Effects of Pasireotide LAR Administration on Lymphocele Prevention after Axillary Node Dissection for Breast Cancer: Results of a Randomized Non-Comparative Phase 2 Study
Cited by: 5
Author(s): E. Chéreau, Catherine Uzan, Emmanuelle Boutmy, Sarah Zohar, C. Bézu, Chafika Mazouni, Jean-Rémi Garbay, Émile Daraı̈, Roman Rouzier
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0215794

Research applications of primary biodiversity databases in the digital age
Cited by: 69
Author(s): Joan E. Ball-Damerow, Laura Brenskelle, Narayani Barve, Pamela S. Soltis, Petra Sierwald, Rüdiger Bieler, Raphael LaFrance, Arturo H. Ariño, Robert Guralnick
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0015827

Discovering Conformational Sub-States Relevant to Protein Function
Cited by: 64
Author(s): Arvind Ramanathan, Andrej J. Savol, Christopher J. Langmead, Pratul K. Agarwal, Chakra Chennubhotla
Software Mentions: 1
Published: over 15 years ago

10.1007/s00384-017-2802-z

Diversion colitis 25 years later: the phenomenon of the disease
Cited by: 16
Author(s): Marek Szczepkowski, Tomasz Banasiewicz, Adam Kobus
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0112592

Predictive Value of Interferon-Lambda Gene Polymorphisms for Treatment Response in Chronic Hepatitis C
Cited by: 20
Author(s): S. Süsser, Eva Herrmann, Christian Lange, Nabila Hamdi, Tobias Müller, Thomas Berg, D. Perner, Stefan Zeuzem, Christoph Sarrazin
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0011626

Probabilistic Daily ILI Syndromic Surveillance with a Spatio-Temporal Bayesian Hierarchical Model
Cited by: 21
Author(s): Ta‐Chien Chan, Chwan-Chuen King, Muh–Yong Yen, Po‐Hui Chiang, Chien-Sheng Huang, Chuhsing Kate Hsiao
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0057953

Spatiotemporal Dynamics of Early DNA Damage Response Proteins on Complex DNA Lesions
Cited by: 37
Author(s): Frank Tobias, Daniel Löb, Nicor Lengert, Marco Durante, Barbara Drossel, G. Taucher-Scholz, Burkhard Jakob
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0114180

Deciphering the Prokaryotic Community and Metabolisms in South African Deep-Mine Biofilms through Antibody Microarrays and Graph Theory
Cited by: 22
Author(s): Yolanda Blanco, Luis A. Rivas, Antonio García-Moyano, Jacobo Aguirre, Patricia Cruz-Gil, Arantxa Palacín, Esta van Heerden, Vı́ctor Parro
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0084517

Angiotensin-Induced Abdominal Aortic Aneurysms in Hypercholesterolemic Mice: Role of Serum Cholesterol and Temporal Effects of Exposure
Cited by: 13
Author(s): Petra Prins, Michael Hill, David Airey, Sam Nwosu, Prudhvidhar R. Perati, Hagai Tavori, MacRae F. Linton, Valentina Kon, Sergio Fazio, Uchechukwu K.A. Sampson
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-9-355

Correlation between the secondary structure of pre-mRNA introns and the efficiency of splicing in Saccharomyces cerevisiae
Cited by: 42
Author(s): Sanja Rogić, Ben Montpetit, Holger H. Hoos, Alan K. Mackworth, B. F. Francis Ouellette, Philip Hieter
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.pone.0059487

Disparities in Outcomes following Admission for Cholangitis
Cited by: 9
Author(s): Julia McNabb‐Baltar, Quoc‐Dien Trinh, Alan N. Barkun
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2156-15-41

Genome-wide association studies for hematological traits in Chinese Sutai pigs
Cited by: 35
Author(s): Feng Zhang, Zhiyan Zhang, Xueming Yan, Hao Chen, Wanchang Zhang, Hong Yuan, Lusheng Huang
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0235141

Differences in the frequency of genetic variants associated with iron imbalance among global populations
Cited by: 14
Author(s): Momodou W. Jallow, Anthony Cerami, Taane G. Clark, Andrew M. Prentice, Susana Campino
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0017622

Wild Bird Migration across the Qinghai-Tibetan Plateau: A Transmission Route for Highly Pathogenic H5N1
Cited by: 98
Author(s): Diann J. Prosser, Peng Cui, John Y. Takekawa, Mingjie Tang, Yuansheng Hou, Bridget M. Collins, Binbin Yan, Nichola J. Hill, Tianxian Li, Yongdong Li, Fumin Lei, Shan Guo, Xiefei Zhi, Yong He, Yuanchun Zhou, David C. Douglas, William M. Perry, Scott H. Newman
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0011635

Predators Reduce Extinction Risk in Noisy Metapopulations
Cited by: 3
Author(s): James C. Bull, Michael B. Bonsall
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0128651

Evidence for Immune Response, Axonal Dysfunction and Reduced Endocytosis in the Substantia Nigra in Early Stage Parkinson’s Disease
Cited by: 103
Author(s): Anke A. Dijkstra, Angela Ingrassia, Renée X. de Menezes, Ronald E. van Kesteren, Annemieke Rozemüller, Peter Heutink, Wilma D. J. van de Berg
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0118847

Genetic Dissection of Grain Size and Grain Number Trade-Offs in CIMMYT Wheat Germplasm
Cited by: 80
Author(s): Simon Griffiths, Luzie U. Wingen, Julian Pietragalla, Guillermo García, Ahmed Khairul Hasan, Daniel J. Miralles, Daniel F. Calderini, Jignaben Bipinchandra Ankleshwaria, Michelle Leverington Waite, James Simmonds, J. W. Snape, M.P. Reynolds
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0162552

Impact of Resident Rotations on Critically Ill Patient Outcomes: Results of a French Multicenter Observational Study
Cited by: 3
Author(s): Benjamin Chousterman, Romain Pirracchio, Bertrand Guidet, Philippe Aegerter, Hervé Mentec
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0059551

Risk of Cardiovascular Disease from Antiretroviral Therapy for HIV: A Systematic Review
Cited by: 175
Author(s): Clay Bavinger, Eran Bendavid, Katherine E. Niehaus, Richard A. Olshen, Ingram Olkin, Vandana Sundaram, Nicole Wein, Mark Holodniy, Nanjiang Hou, Douglas K Owens, Manisha Desai
Software Mentions: 1
Published: over 13 years ago

10.1038/s41598-019-50339-1

New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality
Cited by: 59
Author(s): Charline Giguet-Covex, Gentile Francesco Ficetola, Kevin Walsh, Jérôme Poulenard, Manon Bajard, Laurent Fouinat, Pierre Sabatier, Ludovic Gielly, Erwan Messager, Anne‐Lise Develle, Fernand David, Pierre Taberlet, Élodie Brisset, Frédéric Guiter, Rémi Sinet, Fabien Arnaud
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0172133

Genetic architecture of cold tolerance in rice (Oryza sativa) determined through high resolution genome-wide analysis
Cited by: 96
Author(s): Ehsan Shakiba, Jeremy D. Edwards, F. Jodari, Sara E. Duke, Angela M. Baldo, Pavel Korniliev, Susan R. McCouch, G. C. Eizenga
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0032166

Monocyte Gene Expression Signature of Patients with Early Onset Coronary Artery Disease
Cited by: 32
Author(s): Suthesh Sivapalaratnam, Hanneke Basart, Nicholas A. Watkins, Stephanie Maiwald, Augusto Rendon, Unni Krishnan, Brigitte M. Sondermeijer, Esther E. Creemers, S.J. Pinto-Sietsma, Kees Hovingh, Willem H. Ouwehand, John J.P. Kastelein, Alison H. Goodall, Mieke D. Trip
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0247394

IL-6 promotes MYC-induced B cell lymphomagenesis independent of STAT3
Cited by: 2
Author(s): Oleksi Petrenko, Jinyu Li, Velasco Cimica, Patricio Mena-Taboada, Ha Youn Shin, Stephen D’Amico, Nancy C. Reich
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2156-4-S1-S38

Stability of exploratory multivariate data modeling in longitudinal data
Cited by: 2
Author(s): Haydar Sengul, M. Michael Barmada
Software Mentions: 1
Published: over 23 years ago

10.1371/journal.pone.0012141

NMDA Receptors on Non-Dopaminergic Neurons in the VTA Support Cocaine Sensitization
Cited by: 36
Author(s): Yu Luo, Cameron H. Good, Oscar Dı́az-Ruiz, Yajun Zhang, Alexander F. Hoffman, Lufei Shan, Serena Y. Kuang, Nasir Malik, Vladimir I. Chefer, Andreas C. Tomac, Carl R. Lupica, Cristina M. Bäckman
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0000795

Simple Sequence Repeats Provide a Substrate for Phenotypic Variation in the Neurospora crassa Circadian Clock
Cited by: 65
Author(s): Todd P. Michael, Sohyun Park, Tae Sung Kim, Jim Booth, Amanda Byer, Qi Sun, Joanne Chory, Kwangwon Lee
Software Mentions: 1
Published: about 19 years ago

10.1111/ics.12622

Comprehensive histological investigation of age‐related changes in dermal extracellular matrix and muscle fibers in the upper lip vermilion
Cited by: 0
Author(s): Takamasa Gomi, Toru Imamura
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0195587

Microalgal photophysiology and macronutrient distribution in summer sea ice in the Amundsen and Ross Seas, Antarctica
Cited by: 10
Author(s): Anders Torstensson, Agneta Fransson, Kim Currie, Angela Wulff, Melissa Chierici
Software Mentions: 1
Published: over 8 years ago

10.1186/s12876-020-01264-5

Reduced risk of post ERCP pancreatitis in statin users
Cited by: 9
Author(s): Yousaf Hadi, Syeda Fatima Naqvi, Abdelhai Abdelqader, Justin Kupec, John Nasr
Software Mentions: 1
Published: over 6 years ago

Projects: pypi: package

Science Score: 65/100

Penalties:

Papers Mentioning package 1,300