Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: package

https://packages.ecosyste.ms/registries/pypi.org/packages/package

package is a package to package your package
1 version
Latest release: about 13 years ago
7,219 downloads last month

Papers Mentioning package 1,300

10.1186/s12864-019-5839-2
Genome-wide identification and characterization of ABA receptor PYL/RCAR gene family reveals evolution and roles in drought stress in Nicotiana tabacum
Cited by: 32
Author(s): Ge Bai, He Xie, Huaiying Yao, Liang Feng, Xuejun Chen, Yihan Zhang, Bingguan Xiao, Jun Yang, Yongping Li, Da-Hai Yang
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0042855
Generation of Induced Pluripotent Stem Cells from Human Nasal Epithelial Cells Using a Sendai Virus Vector
Cited by: 45
Author(s): Manabu Ono, Yuko Hamada, Yasue Horiuchi, Mami Matsuo-Takasaki, Yoshimasa Imoto, Kaishi Satomi, Tadao Arinami, Mamoru Hasegawa, Tsuyoshi Fujioka, Yukio Nakamura, Emiko Noguchi
Software Mentions: 1
Published: almost 12 years ago
10.1186/s12864-021-07607-0
Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces
Cited by: 37
Author(s): Anna Cuscó, Daniel Catalá Pérez, Joaquim Viñes, Norma Fàbregas, Olga Francino
Software Mentions: 1
Published: about 3 years ago
10.1186/1471-2164-12-316
Comparative genomics of Escherichia coli isolated from patients with inflammatory bowel disease
Cited by: 44
Author(s): Rebecca Munk Vejborg, Viktoria Hancock, Andreas Munk Petersen, Karen A. Krogfelt, Per Klemm
Software Mentions: 1
Published: almost 13 years ago
10.1186/s13613-015-0070-z
Acute respiratory failure in patients with hematological malignancies: outcomes according to initial ventilation strategy. A groupe de recherche respiratoire en réanimation onco-hématologique (Grrr-OH) study
Cited by: 37
Author(s): Virginie Lemiale, Matthieu Resche-Rigon, Djamel Mokart, Frédéric Pène, Antoine Rabbat, Achille Kouatchet, François Vincent, Fabrice Bruneel, Martine Nyunga, Christine Lebert, Pierre Perez, Anne-Pascale Meert, Dominique Benoît, Sylvie Chevret, Élie Azoulay
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0005783
The Role of Demography and Markets in Determining Deforestation Rates Near Ranomafana National Park, Madagascar
Cited by: 15
Author(s): Christopher P. Brooks, Christopher Holmes, Karen L. Kramer, Barry J. Barnett, Timothy H. Keitt
Software Mentions: 1
Published: almost 15 years ago
10.1371/journal.pone.0070903
Genome-Wide Association Study Identifies a Novel Canine Glaucoma Locus
Cited by: 23
Author(s): Saija Ahonen, Elina Maria Pietilä, Cathryn S. Mellersh, Katriina Tiira, Liz Hansen, Gary S. Johnson, Hannes Lohi
Software Mentions: 1
Published: almost 11 years ago
10.18632/oncotarget.23760
Single-cell RNA sequencing reveals gene expression signatures of breast cancer-associated endothelial cells
Cited by: 42
Author(s): Zhonghua Sun, Chih‐Yang Wang, Devon A. Lawson, Serena S. Kwek, Hugo Gonzalez Velozo, Mark Owyong, Ming Derg Lai, Lawrence Fong, Mark Wilson, Hua Su, Zena Werb, Daniel L Cooke
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0185005
Molecular population genetics of the Polycomb genes in Drosophila subobscura
Cited by: 0
Author(s): Juan M. Calvo-Martín, Montserrat Papaceit, Carmen Segarra
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0032890
Evidence for a Trade-Off Strategy in Stone Oak (Lithocarpus) Seeds between Physical and Chemical Defense Highlights Fiber as an Important Antifeedant
Cited by: 28
Author(s): Xi Chen, Charles H. Cannon, Nancy Lou Conklin-Brittan
Software Mentions: 1
Published: about 12 years ago
10.1186/s13063-015-0548-x
A novel comparative effectiveness study of Tai Chi versus aerobic exercise for fibromyalgia: study protocol for a randomized controlled trial
Cited by: 23
Author(s): Chenchen Wang, Timothy E. McAlindon, Roger A. Fielding, William F. Harvey, Jeffrey B. Driban, Lori Lyn Price, Robert A. Kalish, Anna Schmid, Tammy Scott, Christopher H. Schmid
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0075880
Deployment and Post-Deployment Experiences in OEF/OIF Veterans: Relationship to Gray Matter Volume
Cited by: 14
Author(s): Robin L. Aupperle, Colm G. Connolly, Ashley N. Stillman, April C. May, Martin P. Paulus
Software Mentions: 1
Published: over 10 years ago
10.1186/s13063-016-1457-3
Bayesian accrual prediction for interim review of clinical studies: open source R package and smartphone application
Cited by: 10
Author(s): Yu Jiang, Peter Guarino, Shuangge Ma, Steve Simon, Matthew S. Mayo, Raghavan Rama, Byron J. Gajewski
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0041361
Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility
Cited by: 857
Author(s): Lovisa E. Reinius, Nathalie Acevedo, Maaike Joerink, Göran Pershagen, Sven-Erik Dahlén, Dario Greco, Cilla Söderhäll, Annika Scheynius, Juha Kere
Software Mentions: 1
Published: almost 12 years ago
10.1186/1471-2164-6-62
In vitro identification and in silico utilization of interspecies sequence similarities using GeneChip® technology
Cited by: 38
Author(s): Dmitry N. Grigoryev, Shwu Fan, Brett A. Simon, Rafael A. Irizarry, Shui Q. Ye, Joe G.N. Garcia
Software Mentions: 1
Published: about 19 years ago
10.1371/journal.pone.0207878
Periods of high dengue transmission defined by rainfall do not impact efficacy of dengue vaccine in regions of endemic disease
Cited by: 4
Author(s): Chloé Pasin, M. Elizabeth Halloran, Peter B. Gilbert, Edith Langevin, R. Leon Ochiai, Punnee Pitisuttithum, María Rosario Capeding, Gabriel Carrasquilla, Carina Frago, Margarita Cortés, Laurent Chambonneau, Zoe Moodie
Software Mentions: 1
Published: over 5 years ago
10.1186/s12864-016-3056-9
Comparative genomics reveals Lysinibacillus sphaericus group comprises a novel species
Cited by: 16
Author(s): Camilo Gómez-Garzón, Alejandra Hernández-Santana, Jenny Dussán
Software Mentions: 1
Published: over 7 years ago
10.3390/cancers13143500
Finite Element Analysis of the Microwave Ablation Method for Enhanced Lung Cancer Treatment
Cited by: 14
Author(s): M. Radmilović-Radjenović, Martin Sabo, Marta Šoltésová Prnová, Lukáš Šoltés, Branislav Radjenović
Software Mentions: 1
Published: almost 3 years ago
10.1128/mBio.02007-18
BacCapSeq: a Platform for Diagnosis and Characterization of Bacterial Infections
Cited by: 31
Author(s): Orchid M Allicock, Cheng Guo, Anne‐Catrin Uhlemann, Susan Whittier, Lokendra V. Chauhan, Joel A. Garcia, Adam Price, Stephen S. Morse, Nischay Mishra, Thomas Briese, W. Ian Lipkin
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0170778
Skin Autofluorescence and Subclinical Atherosclerosis in Mild to Moderate Chronic Kidney Disease: A Case-Control Study
Cited by: 13
Author(s): Enric Sánchez, Àngels Betriu, David Arroyo, Carolina Martínez López, Marta Hernández, Ferrán Rius, Elvira Fernández, Albert Lecube
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0181135
The association between ethnicity and vaginal microbiota composition in Amsterdam, the Netherlands
Cited by: 113
Author(s): Hanneke Borgdorff, Charlotte van der Veer, Robin van Houdt, Catharina J. Alberts, Henry Jc de Vries, Sylvia M. Bruisten, Marieke B. Snijder, Maria Prins, Suzanne E. Geerlings, Maarten F. Schim van der Loeff, Janneke van de Wijgert
Software Mentions: 1
Published: almost 7 years ago
10.1186/1471-2164-13-S7-S17
MicroRNA-centric measurement improves functional enrichment analysis of co-expressed and differentially expressed microRNA clusters
Cited by: 10
Author(s): Su Yeon Lee, Kyung-Ah Sohn, Ju Han Kim
Software Mentions: 1
Published: over 11 years ago
10.1038/s41419-017-0133-1
Primed atypical ductal hyperplasia-associated fibroblasts promote cell growth and polarity changes of transformed epithelium-like breast cancer MCF-7 cells via miR-200b/c-IKKβ signaling
Cited by: 16
Author(s): Yan Sun, Dan Yang, Lei Xi, Yanlin Chen, Lianshe Fu, Kai Sun, Jun Yin, Xiaotian Li, Shuiqing Liu, Yilu Qin, Manran Liu, Yixuan Hou
Software Mentions: 1
Published: over 6 years ago
10.1128/mBio.03235-19
Syntrophy via Interspecies H <sub>2</sub> Transfer between <i>Christensenella</i> and <i>Methanobrevibacter</i> Underlies Their Global Cooccurrence in the Human Gut
Cited by: 62
Author(s): Albane Ruaud, Sofia Esquivel-Elizondo, Jacobo de la Cuesta-Zuluaga, Jillian L. Waters, Largus T. Angenent, Nicholas D. Youngblut, Ruth E. Ley
Software Mentions: 1
Published: about 4 years ago
10.1016/j.celrep.2021.109378
HLA class-I-peptide stability mediates CD8+ T cell immunodominance hierarchies and facilitates HLA-associated immune control of HIV
Cited by: 11
Author(s): Clarety Kaseke, Ryan J. Park, Nishant K. Singh, Dylan Koundakjian, Arman Bashirova, Wilfredo F. Garcia Beltran, Overbeck C. Takou Mbah, Jiaqi Ma, Fernando Senjobe, Jonathan M. Urbach, Anusha Nathan, Elizabeth J. Rossin, Rhoda Tano-Menka, Ashok Khatri, Alicja Piechocka-Trocha, Michael T. Waring, Michael E. Birnbaum, Brian M. Baker, Mary Carrington, Bruce D. Walker, Gaurav D. Gaiha
Software Mentions: 1
Published: almost 3 years ago
10.1371/journal.pone.0097562
Genetic Diversity of Circulating Rotavirus Strains in Tanzania Prior to the Introduction of Vaccination
Cited by: 35
Author(s): Sabrina John Moyo, Bjørn Blomberg, Kurt Hanevik, Øyvind Kommedal, M Kirsti Vainio, Samuel Y Maselle, Nina Langeland
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0041528
Advanced Methylome Analysis after Bisulfite Deep Sequencing: An Example in Arabidopsis
Cited by: 19
Author(s): Huy Q. Dinh, Manu Dubin, Fritz J. Sedlazeck, Nicole Lettner, Ortrun Mittelsten Scheid, Arndt von Haeseler
Software Mentions: 1
Published: almost 12 years ago
10.1007/s00441-018-2860-8
Expression of neutrophil gelatinase-associated lipocalin (NGAL) in the gut in Crohn’s disease
Cited by: 25
Author(s): Silje Thorsvik, Ingrid Bakke, Atle van Beelen Granlund, Elin Synnøve Røyset, Jan Kristian Damås, Ann Elisabet Østvik, Arne K. Sandvik
Software Mentions: 1
Published: almost 6 years ago
10.3390/cells10092206
Two-Step In Vitro Model to Evaluate the Cellular Immune Response to SARS-CoV-2
Cited by: 4
Author(s): Juliana Gil Melgaço, Tamiris Azamor, Andréa Marques Vieira da Silva, José Henrique Rezende Linhares, Tiago Pereira dos Santos, Ygara da Silva Mendes, Sheila Maria Barbosa de Lima, Camila Cesário Fernandes, Jane da Silva, Alessandro Fonseca de Souza, Luciana Neves Tubarão, Danielle Brito E Cunha, Tamires B S Pereira, Catarina E L Menezes, Milene Dias Miranda, Aline da Rocha Matos, Bráulia Costa Caetano, Jessica Santa Cruz Carvalho Martins, Thyago Leal-Calvo, Natalia Fintelman Rodrigues, Carolina Q Sacramento, Marilda Agudo Mendonça Teixeira de Siqueira, Milton Ozório Moraes, Sotiris Missailidis, Patrícia Neves, Ana Paula Dinis Ano Bom
Software Mentions: 1
Published: over 2 years ago
10.1371/journal.pone.0194889
Statistical and Machine Learning forecasting methods: Concerns and ways forward
Cited by: 721
Author(s): Spyros Makridakis, Evangelos Spiliotis, Vassilios Assimakopoulos
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0161306
A Cytokine Signalling Network for the Regulation of Inducible Nitric Oxide Synthase Expression in Rheumatoid Arthritis
Cited by: 59
Author(s): Poulami Dey, Venugopal Panga, Srivatsan Raghunathan
Software Mentions: 1
Published: over 7 years ago
10.1186/1471-2164-13-594
Molecular evidence for the bi-clonal origin of neuroendocrine tumor derived metastases
Cited by: 14
Author(s): Beate Rinner, Birgit Gallè, Slave Trajanoski, Carina Fischer, Martina Hatz, Theresa Maierhofer, Gabriele Michelitsch, Farid Moinfar, Ingeborg Stelzer, Roswitha Pfragner, Christian Godballe
Software Mentions: 1
Published: over 11 years ago
10.1111/j.1747-0285.2012.01416.x
Novel Cruzain Inhibitors for the Treatment of Chagas’ Disease
Cited by: 30
Author(s): Kathleen E. Rogers, Henrik Keränen, Jacob D. Durrant, Joseline Ratnam, Allison K. Doak, Michelle R. Arkin, J. Andrew McCammon
Software Mentions: 1
Published: almost 12 years ago
10.1186/1749-8546-8-25
Phellinus linteus polysaccharide extracts increase the mitochondrial membrane potential and cause apoptotic death of THP-1 monocytes
Cited by: 16
Author(s): L J Van Griensven, H. A. Verhoeven
Software Mentions: 1
Published: over 11 years ago
10.1186/s12864-016-3338-2
Carbohydrate metabolism in Oenococcus oeni: a genomic insight
Cited by: 17
Author(s): Alice Cibrario, Claire Peanne, Marine Lailheugue, Hugo Campbell-Sills, Marguerite Dols‐Lafargue
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0071916
Taxonomic and Life History Bias in Herbicide Resistant Weeds: Implications for Deployment of Resistant Crops
Cited by: 26
Author(s): Jodie S. Holt, Shana R. Welles, Katia Silvera, Ian Heap, Sylvia M. Heredia, Alejandra Martínez‐Berdeja, Kai T. Palenscar, Lynn C. Sweet, Norman C. Ellstrand
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0233397
Geographical variations in cancer mortality and social inequalities in southern Spain (Andalusia). 2002-2013
Cited by: 10
Author(s): Vanessa Santos-Sánchez, Juan Antonio Córdoba-Doña, Francisco Viciana, Antonio Escolar-Pujolar, Lucia Pozzi, Rebeca Ramis
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0176951
Surface reflectance drives nest box temperature profiles and thermal suitability for target wildlife
Cited by: 34
Author(s): Stephen R. Griffiths, Jessica A. Rowland, Natalie J. Briscoe, Pia E. Lentini, Kathrine A. Handasyde, Linda F. Lumsden, Kylie A. Robert
Software Mentions: 1
Published: about 7 years ago
10.1002/cre2.164
Dental professionals' experience with and handling of suspicion of child maltreatment in a small‐scale society, the Faroe Islands
Cited by: 6
Author(s): Unn Jakobsen, Anna Sofia Fjallheim, Hannes Gislason, Eina Gudmundsen, Sven Poulsen, Dorte Haubek
Software Mentions: 1
Published: over 5 years ago
10.1101/2021.02.05.21251235
Emergence of an early SARS-CoV-2 epidemic in the United States
Cited by: 5
Author(s): Mark Zeller, Karthik Gangavarapu, Catelyn Anderson, Allison R. Smither, John A. Vanchiere, Rebecca Rose, Gytis Dudas, Donald R. Snyder, Alexander Watts, Nathaniel L. Matteson, Refugio Robles‐Sikisaka, Maximilian Marshall, Amy K. Feehan, Gilberto Sabino‐Santos, Antoinette R. Bell-Kareem, Laura D. Hughes, Manar Alkuzweny, Patricia Snarski, Julia Garcia‐Diaz, Rona S. Scott, Lilia I. Melnik, Raphaëlle Klitting, Michelle McGraw, Pedro Belda-Ferre, Peter DeHoff, Shashank Sathe, Clarisse Marotz, Nathan D. Grubaugh, David J. Nolan, Arnaud Drouin, Kaylynn J. Genemaras, Karissa Chao, Sarah E. Topol, Emily Spencer, Laura Nicholson, Stefan Aigner, G Yeo, Lauge Farnaes, Charlotte A. Hobbs, Louise C. Laurent, Rob Knight, Emma B. Hodcroft, Kamran Khan, Dahlene N. Fusco, Vaughn S. Cooper, Phillipe Lemey, Lauren Gardner, Susanna L. Lamers, Jeremy P. Kamil, Robert F. Garry, Marc A. Suchard, Kristian G. Andersen
Software Mentions: 1
Published: over 3 years ago
10.14309/ctg.0000000000000070
Selection Between Liver Resection Versus Transarterial Chemoembolization in Hepatocellular Carcinoma: A Multicenter Study
Cited by: 13
Author(s): Sirui Fu, Jingwei Wei, Jie Zhang, Di Dong, Jiangdian Song, Li Yong, Chongyang Duan, Shuaitong Zhang, Chongyang Duan, Dongsheng Gu, Xudong Chen, Xiaohan Hao, Xiaofeng He, Jun‐Min Yan, Zhenyu Liu, Jie Tian, Ligong Lu
Software Mentions: 1
Published: almost 5 years ago
10.1038/s42003-020-0777-8
Cassiosomes are stinging-cell structures in the mucus of the upside-down jellyfish Cassiopea xamachana
Cited by: 25
Author(s): Cheryl Lewis Ames, Anna M. L. Klompen, Krishna N. Badhiwala, Kaden Muffett, Abigail J. Reft, M. Ashok Kumar, Jennie D. Janssen, Janna N. Schultzhaus, Lauren D. Field, Megan E. Muroski, Nick Bezio, Jacob T. Robinson, Dagmar H. Leary, Paulyn Cartwright, Allen G. Collins, Gary J. Vora
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0104241
Population Genomics of the Fission Yeast Schizosaccharomyces pombe
Cited by: 44
Author(s): Jeffrey A. Fawcett, Tetsushi Iida, Shohei Takuno, Ryuichi P. Sugino, Tomoyuki Kado, Kazuto Kugou, Sachiko Mura, Takehiko Kobayashi, Kunihiro Ohta, Jun‐ichi Nakayama, Hideki Innan
Software Mentions: 1
Published: almost 10 years ago
10.1038/s42003-021-02117-x
Derivation of stationary distributions of biochemical reaction networks via structure transformation
Cited by: 7
Author(s): Hyukpyo Hong, Jinsu Kim, M. Ali Al-Radhawi, Eduardo D. Sontag, Jae Kyoung Kim
Software Mentions: 1
Published: almost 3 years ago
10.1371/journal.pone.0095413
Overrepresentation of Glutamate Signaling in Alzheimer's Disease: Network-Based Pathway Enrichment Using Meta-Analysis of Genome-Wide Association Studies
Cited by: 48
Author(s): Eduardo Pérez‐Palma, Bernabé I. Bustos, Camilo Villamán, Marcelo Alarcón, Miguel E. Ávila, Giorgia D. Ugarte, Ariel E. Reyes, Carlos Opazo, Giancarlo V. De Ferrari
Software Mentions: 1
Published: about 10 years ago
10.1101/2021.05.13.21257065
A common allele of HLA mediates asymptomatic SARS-CoV-2 infection
Cited by: 5
Author(s): Danillo G. Augusto, Tasneem Yusufali, Noah D. Peyser, Xochitl Butcher, Gregory M. Marcus, Jeffrey E. Olgin, Mark J. Pletcher, Martin Maiers, Jill A. Hollenbach
Software Mentions: 1
Published: about 3 years ago
10.1155/2021/6619598
Utilizing EEG to Explore Design Fixation during Creative Idea Generation
Cited by: 7
Author(s): Juan Cao, Wei Zhao, Xin Guo
Software Mentions: 1
Published: about 3 years ago
10.1093/conphys/coaa097
Artificial light at night does not alter heart rate or locomotor behaviour in Caribbean spiny lobster (<i>Panulirus argus</i>): insights into light pollution and physiological disturbance using biologgers
Cited by: 5
Author(s): S. Clay Steell, Steven J. Cooke, Erika J. Eliason
Software Mentions: 1
Published: over 4 years ago
10.1186/s13054-019-2425-6
Influenza and associated co-infections in critically ill immunosuppressed patients
Cited by: 19
Author(s): Ignacio Martín‐Loeches, Virginie Lemiale, Pierce Geoghegan, Mary Aisling McMahon, Peter Pickkers, Márcio Soares, Anders Perner, Tine Sylvest Meyhoff, Ramin Brandt Bukan, Jordi Rello, Philippe R. Bauer, Andry Van de Louw, Fabio Silvio Taccone, Jorge I. Salluh, Pleun Hemelaar, Peter Schellongowski, Kateřina Rusínová, Nicolas Terzi, Sangeeta Mehta, Massimo Antonelli, Achille Kouatchet, Pål Klepstad, Miia Valkonen, Precious Pearl Landburg, Andreas Barratt‐Due, Fabrice Bruneel, Frédéric Pène, Victoria Metaxa, Anne Moreau, Virginie Souppart, Gastón Burghi, Christophe Girault, Ulysses V. A. Silva, Luca Montini, François Barbier, Lene Nielsen, Benjamin Gaborit, Djamel Mokart, Sylvie Chevret, Élie Azoulay
Software Mentions: 1
Published: about 5 years ago
10.1186/cc11178
Age of blood and recipient factors determine the severity of transfusion-related acute lung injury (TRALI)
Cited by: 61
Author(s): John‐Paul Tung, John F. Fraser, Maria Nataatmadja, Kathryn Colebourne, Adrian Barnett, Kristen Glenister, Angela Zhou, Peter Wood, Christopher C. Silliman, Yoke Lin Fung
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0062233
DNA Methylation Profile Distinguishes Clear Cell Sarcoma of the Kidney from Other Pediatric Renal Tumors
Cited by: 21
Author(s): Hikaru Ueno, Hajime Okita, Shingo Akimoto, Kenichiro Kobayashi, Kazuhiko Nakabayashi, Kenichiro Hata, Junichiro Fujimoto, Jun Ichi Hata, Masahiro Fukuzawa, Nobutaka Kiyokawa
Software Mentions: 1
Published: about 11 years ago
10.1016/j.cub.2018.04.015
Short-Term, Intermittent Fasting Induces Long-Lasting Gut Health and TOR-Independent Lifespan Extension
Cited by: 94
Author(s): James H. Catterson, Mobina Khericha, Miranda C. Dyson, Alec Vincent, Rebecca Callard, Steven M. Haveron, Arjunan Rajasingam, Mumtaz Ahmad, Linda Partridge
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13613-021-00863-z
Role of sleep on respiratory failure after extubation in the ICU
Cited by: 8
Author(s): Arnaud W. Thille, Stéphanie Barrau, C. Beuvon, Damien Marié, Faustine Reynaud, J. L. Bardin, Adrien Pépin-Lehalleur, Vanessa Bironneau, J.-C. Meurice, Rémi Coudroy, Jean‐Pierre Frat, René Robert, Christophe Rault, Xavier Drouot
Software Mentions: 1
Published: about 3 years ago
10.1371/journal.pone.0044043
Cost per QALY (Quality-Adjusted Life Year) and Lifetime Cost of Prolonged Mechanical Ventilation in Taiwan
Cited by: 21
Author(s): Mei Hung, Hsin Ming Lu, Likwang Chen, Mingxiang Lin, Cheng Ren Chen, Chong‐Jen Yu, Jung‐Der Wang
Software Mentions: 1
Published: over 11 years ago
10.1111/apha.13532
Proliferation does not contribute to murine models of renin cell recruitment
Cited by: 11
Author(s): Omar Guessoum, Momna Zainab, Maria Luisa S. Sequeira-Lόpez, R. Ariel Gomez
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0083720
QTL Map Meets Population Genomics: An Application to Rice
Cited by: 9
Author(s): Jeffrey A. Fawcett, Tomoyuki Kado, Eriko Sasaki, Shohei Takuno, Kentaro Yoshida, Ryuichi P. Sugino, Shunichi Kosugi, Satoshi Natsume, Chikako Mitsuoka, Aiko Uemura, Hiroki Takagi, Akira Abe, Takashige Ishii, Hideki Innan
Software Mentions: 1
Published: over 10 years ago
10.1186/s13000-015-0447-1
MDR-1 and MRP-1 activity in peripheral blood leukocytes of rheumatoid arthritis patients
Cited by: 17
Author(s): Tamás Micsík, András Lőrincz, János Gál, Richárd Schwab, István Peták
Software Mentions: 1
Published: over 8 years ago
10.1038/ismej.2016.47
Genetic and life-history traits associated with the distribution of prophages in bacteria
Cited by: 268
Author(s): Marie Touchon, Aude Bernheim, Eduardo P. C. Rocha
Software Mentions: 1
Published: about 8 years ago
10.1186/s13550-019-0563-0
Association of metabolic and genetic heterogeneity in head and neck squamous cell carcinoma with prognostic implications: integration of FDG PET and genomic analysis
Cited by: 11
Author(s): Jinyeong Choi, Jeong An Gim, Changhun Oh, Seunggyun Ha, Howard Lee, Hongyoon Choi, Hyung Jun Im
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0044397
Genetical Genomics Identifies the Genetic Architecture for Growth and Weevil Resistance in Spruce
Cited by: 23
Author(s): Ilga Porth, Richard Allen White, Barry Jaquish, René I. Alfaro, Carol Ritland, Kermit Ritland
Software Mentions: 1
Published: over 11 years ago
10.1186/s13613-016-0202-0
Increased mortality in hematological malignancy patients with acute respiratory failure from undetermined etiology: a Groupe de Recherche en Réanimation Respiratoire en Onco-Hématologie (Grrr-OH) study
Cited by: 60
Author(s): Adrien Contejean, Virginie Lemiale, Matthieu Resche‐Rigon, Djamel Mokart, Frédéric Pène, Achille Kouatchet, Julien Mayaux, François Vincent, Martine Nyunga, Fabrice Bruneel, Antoine Rabbat, Pierre Perez, Anne-Pascale Meert, Dominique Benoît, Rébecca Hamidfar, Michaël Darmon, M. Jourdain, Anne Renault, Benoı̂t Schlemmer, Élie Azoulay
Software Mentions: 1
Published: over 7 years ago
10.1186/1756-9966-33-49
A 41-gene signature derived from breast cancer stem cells as a predictor of survival
Cited by: 24
Author(s): Zhiqiang Yin, Jing Liu, Yingchun Xu, Jian Yu, Guohui Ding, Feng Yang, Lei Tang, Baohong Liu, Yue Ma, Yuwei Xia, Xiaolin Lin, Hongxia Wang
Software Mentions: 1
Published: almost 10 years ago
10.1186/s12864-015-1563-8
Ribosome profiling reveals translation control as a key mechanism generating differential gene expression in Trypanosoma cruzi
Cited by: 104
Author(s): Pablo Smircich, Guillermo Eastman, Saloê Bispo, Marı́a Ana Duhagon, Eloise Pavão Guerra-Slompo, Beatríz Garat, Samuel Goldenberg, David J. Munroe, Bruno Dallagiovanna, Fabíola Holetz, José Sotelo‐Silveira
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0184400
Sources of pain in laparoendoscopic gynecological surgeons: An analysis of ergonomic factors and proposal of an aid to improve comfort
Cited by: 7
Author(s): Sa Ra Lee, Sunah Shim, Taeri Yu, Kyoung Sook Jeong, Hye Won Chung
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0111392
Methane-Derived Carbon in the Benthic Food Web in Stream Impoundments
Cited by: 5
Author(s): John Gichimu Mbaka, Celia Somlai, Denis Köpfer, Andreas Maeck, Andreas Lorke, Ralf B. Schäfer
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0002196
Evidence for Over-Dispersion in the Distribution of Clinical Malaria Episodes in Children
Cited by: 56
Author(s): Tabitha Mwangi, Greg Fegan, Thomas N. Williams, Sam Kinyanjui, Robert W. Snow, Kevin Marsh
Software Mentions: 1
Published: almost 16 years ago
10.1371/journal.pone.0104696
Successful Non-Surgical Deep Uterine Transfer of Porcine Morulae after 24 Hour Culture in a Chemically Defined Medium
Cited by: 45
Author(s): H. Rodríguez‐Martínez, Miguel Ángel, C. Cuello, J. Sánchez-Osorio, J. Gomis, Inmaculada Parrilla, Jordi Vilà, Ignaci Colina, Mònica Dı́az, Josep Peñuelas i Reixach, José Luís Vázquez, Juan M. Vázquez, Jordi Roca, M.A. Gil
Software Mentions: 1
Published: almost 10 years ago
10.1002/ece3.5598
Agroforestry coffee soils increase the insect‐suppressive potential offered by entomopathogenic fungi over full‐sun soils: A case proposing a “bait survival technique”
Cited by: 7
Author(s): Carla Ruffeil Moreira, Daiane Celestino, Tathiana G. Sobrinho, Irene Maria Cardoso, Simon L. Elliot
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0015644
Candidate Genes Detected in Transcriptome Studies Are Strongly Dependent on Genetic Background
Cited by: 37
Author(s): Pernille Sarup, Jesper Givskov Sørensen, Torsten Nygaard Kristensen, Ary A. Hoffmann, Volker Loeschcke, Ken N. Paige, Peter Sørensen
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0016831
Investigating the Potential Role of Genetic and Epigenetic Variation of DNA Methyltransferase Genes in Hyperplastic Polyposis Syndrome
Cited by: 9
Author(s): Musa Drini, Nicholas C. Wong, Hamish S. Scott, Jeffrey M Craig, Alexander Dobrovic, Chelsee Hewitt, Dow Christofer, Joanne Young, Mark A. Jenkins, Richard Saffery, Finlay Macrae
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0211758
Tweeting about public health policy: Social media response to the UK Government’s announcement of a Parliamentary vote on draft standardised packaging regulations
Cited by: 15
Author(s): Jenny Hatchard, João Quariguasi Frota Neto, Christos Vasilakis, Karen Evans-Reeves
Software Mentions: 1
Published: about 5 years ago
10.1002/ece3.7783
No effect of passive integrated transponder tagging method on survival or body condition in a northern population of Black‐capped Chickadees ( <i>Poecile atricapillus</i> )
Cited by: 3
Author(s): Jonathan James Farr, Elène Haave‐Audet, Peter R. Thompson, Kimberley J. Mathot
Software Mentions: 1
Published: almost 3 years ago
10.1002/ece3.1793
Selection and inheritance of sexually dimorphic juvenile plumage coloration
Cited by: 5
Author(s): Angela Tringali, Reed Bowman, Arild Husby
Software Mentions: 1
Published: over 8 years ago
10.1002/ece3.7616
Effects of temperature and photoperiod on the seasonal timing of Western honey bee colonies and an early spring flowering plant
Cited by: 5
Author(s): Gemma Nydia Villagómez, Fabian Nürnberger, Fabrice Réquier, Susanne Schiele, Ingolf Steffan‐Dewenter
Software Mentions: 1
Published: about 3 years ago
10.1371/journal.pone.0015827
Discovering Conformational Sub-States Relevant to Protein Function
Cited by: 64
Author(s): Arvind Ramanathan, Andrej J. Savol, Christopher J. Langmead, Pratul K. Agarwal, Chakra Chennubhotla
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0112592
Predictive Value of Interferon-Lambda Gene Polymorphisms for Treatment Response in Chronic Hepatitis C
Cited by: 20
Author(s): S. Süsser, Eva Herrmann, Christian Lange, Nabila Hamdi, Tobias Müller, Thomas Berg, D. Perner, Stefan Zeuzem, Christoph Sarrazin
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0011626
Probabilistic Daily ILI Syndromic Surveillance with a Spatio-Temporal Bayesian Hierarchical Model
Cited by: 21
Author(s): Ta‐Chien Chan, Chwan-Chuen King, Muh–Yong Yen, Po‐Hui Chiang, Chien-Sheng Huang, Chuhsing Kate Hsiao
Software Mentions: 1
Published: almost 14 years ago
10.1371/journal.pone.0057953
Spatiotemporal Dynamics of Early DNA Damage Response Proteins on Complex DNA Lesions
Cited by: 37
Author(s): Frank Tobias, Daniel Löb, Nicor Lengert, Marco Durante, Barbara Drossel, G. Taucher-Scholz, Burkhard Jakob
Software Mentions: 1
Published: about 11 years ago
10.1002/ece3.2208
High herbivore pressure favors constitutive over induced defense
Cited by: 54
Author(s): Ryan J. Bixenmann, Phyllis D. Coley, Alexander Weinhold, Thomas A. Kursar
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0114180
Deciphering the Prokaryotic Community and Metabolisms in South African Deep-Mine Biofilms through Antibody Microarrays and Graph Theory
Cited by: 22
Author(s): Yolanda Blanco, Luis A. Rivas, Antonio García-Moyano, Jacobo Aguirre, Patricia Cruz-Gil, Arantxa Palacín, Esta van Heerden, Vı́ctor Parro
Software Mentions: 1
Published: over 9 years ago
10.1002/ece3.4684
Seascape genetics of the spiny lobster<i>Panulirus homarus</i>in the Western Indian Ocean: Understanding how oceanographic features shape the genetic structure of species with high larval dispersal potential
Cited by: 23
Author(s): Sohana P. Singh, Johan C. Groeneveld, Michael Hart‐Davis, Björn Backeberg, Sandi Willows‐Munro
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.4961
Variability of functional traits and their syndromes in a freshwater fish species (<i>Phoxinus phoxinus</i>): The role of adaptive and nonadaptive processes
Cited by: 17
Author(s): Allan Raffard, Julien Cucherousset, Jérôme G. Prunier, Géraldine Loot, Frédéric Santoul, Simon Blanchet
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0059487
Disparities in Outcomes following Admission for Cholangitis
Cited by: 9
Author(s): Julia McNabb‐Baltar, Quoc‐Dien Trinh, Alan N. Barkun
Software Mentions: 1
Published: about 11 years ago
10.1186/1471-2164-10-385
Microbial comparative pan-genomics using binomial mixture models
Cited by: 94
Author(s): Lars Snipen, Trygve Almøy, David W. Ussery
Software Mentions: 1
Published: over 15 years ago
10.1002/ece3.3237
Riverine fish diversity varies according to geographical isolation and land use modification
Cited by: 11
Author(s): Elizabeth Nicol, Jamie R. Stevens, Susan Jobling
Software Mentions: 1
Published: over 6 years ago
10.1002/jev2.12064
Molecular and functional profiling of apical versus basolateral small extracellular vesicles derived from primary human proximal tubular epithelial cells under inflammatory conditions
Cited by: 13
Author(s): Xiangju Wang, Rachel Wilkinson, Katrina Kildey, Jacobus Ungerer, Michelle M. Hill, Alok K. Shah, Ahmed Mohamed, Mriga Dutt, Jeffrey Molendijk, Helen Healy, Andrew J. Kassianos
Software Mentions: 1
Published: over 3 years ago
10.1002/ece3.4205
Lifetime inbreeding depression in a leaf beetle
Cited by: 6
Author(s): T. Müller, Tabea Dagmar Lamprecht, Karin Schrieber
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.1880
Mapping species abundance by a spatial zero‐inflated <scp>P</scp> oisson model: a case study in the <scp>W</scp> adden <scp>S</scp> ea, the <scp>N</scp> etherlands
Cited by: 22
Author(s): Olga Lyashevska, D.J. Brus, Jaap van der Meer
Software Mentions: 1
Published: over 8 years ago
10.1002/ece3.3923
Habitat quality is more important than matrix quality for bird communities in protected areas
Cited by: 15
Author(s): Matti Häkkilä, Nerea Abrego, Otso Ovaskainen, Mikko Mönkkönen
Software Mentions: 1
Published: about 6 years ago
10.1002/ece3.2459
Sexual selection impacts brain anatomy in frogs and toads
Cited by: 29
Author(s): Yu Zeng, Shang Ling Lou, Wen Bo Liao, Robert Jehle, Alexander Kotrschal
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0017622
Wild Bird Migration across the Qinghai-Tibetan Plateau: A Transmission Route for Highly Pathogenic H5N1
Cited by: 98
Author(s): Diann J. Prosser, Peng Cui, John Y. Takekawa, Mingjie Tang, Yuansheng Hou, Bridget M. Collins, Binbin Yan, Nichola J. Hill, Tianxian Li, Yongdong Li, Fumin Lei, Shan Guo, Xiefei Zhi, Yong He, Yuanchun Zhou, David C. Douglas, William M. Perry, Scott H. Newman
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0011635
Predators Reduce Extinction Risk in Noisy Metapopulations
Cited by: 3
Author(s): James C. Bull, Michael B. Bonsall
Software Mentions: 1
Published: almost 14 years ago
10.1002/ece3.2261
Feral Cat Globetrotters: genetic traces of historical human‐mediated dispersal
Cited by: 7
Author(s): Karl‐Heinz Koch, Dave Algar, Klaus Schwenk
Software Mentions: 1
Published: almost 8 years ago
10.1186/s12864-017-4162-z
eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria
Cited by: 4
Author(s): Nobuaki Kono, Masaru Tomita, Kazuharu Arakawa
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0162552
Impact of Resident Rotations on Critically Ill Patient Outcomes: Results of a French Multicenter Observational Study
Cited by: 3
Author(s): Benjamin Chousterman, Romain Pirracchio, Bertrand Guidet, Philippe Aegerter, Hervé Mentec
Software Mentions: 1
Published: over 7 years ago
10.1007/s00384-017-2802-z
Diversion colitis 25 years later: the phenomenon of the disease
Cited by: 16
Author(s): Marek Szczepkowski, Tomasz Banasiewicz, Adam Kobus
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0059551
Risk of Cardiovascular Disease from Antiretroviral Therapy for HIV: A Systematic Review
Cited by: 175
Author(s): Clay Bavinger, Eran Bendavid, Katherine E. Niehaus, Richard A. Olshen, Ingram Olkin, Vandana Sundaram, Nicole Wein, Mark Holodniy, Nanjiang Hou, Douglas K Owens, Manisha Desai
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0172133
Genetic architecture of cold tolerance in rice (Oryza sativa) determined through high resolution genome-wide analysis
Cited by: 96
Author(s): Ehsan Shakiba, Jeremy D. Edwards, F. Jodari, Sara E. Duke, Angela M. Baldo, Pavel Korniliev, Susan R. McCouch, G. C. Eizenga
Software Mentions: 1
Published: about 7 years ago
10.1002/ece3.1812
Interspecific interactions between wild felids vary across scales and levels of urbanization
Cited by: 55
Author(s): Jesse S. Lewis, Larissa L. Bailey, Sue VandeWoude, Kevin R. Crooks
Software Mentions: 1
Published: over 8 years ago