Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: circtools
https://packages.ecosyste.ms/registries/pypi.org/packages/circtools
circtools - a circular RNA toolbox
14 versions
Latest release: over 1 year ago
67 downloads last month
Papers Mentioning circtools 7
10.3389/fgene.2020.00548
Rcirc: An R Package for circRNA Analyses and VisualizationCited by: 8
Author(s): Peisen Sun, Haoming Wang, Guanglin Li
Software Mentions: 11
Published: over 4 years ago
10.3389/fgene.2019.00981
CircCode: A Powerful Tool for Identifying circRNA Coding AbilityCited by: 49
Author(s): Peisen Sun, Guanglin Li
Software Mentions: 9
Published: about 5 years ago
10.3390/ijms21010293
Docker4Circ: A Framework for the Reproducible Characterization of circRNAs from RNA-Seq DataCited by: 8
Author(s): Giulio Ferrero, Nicola Licheri, Lucia Coscujuela Tarrero, Carlo De Intinis, Valentina Miano, Raffaele Calogero, Francesca Cordero, Michele De Bortoli, Marco Beccuti
Software Mentions: 8
Published: almost 5 years ago
10.1186/s13059-021-02300-7
riboCIRC: a comprehensive database of translatable circRNAsCited by: 39
Author(s): Huihui Li, Mingzhe Xie, Yan Wang, Ludong Yang, Zhi Xie
Software Mentions: 6
Published: over 3 years ago
10.1155/2020/9084901
FcircSEC: An R Package for Full Length circRNA Sequence Extraction and ClassificationCited by: 7
Author(s): Tofazzal Hossain, Yin Peng, Shijie Feng, Yanjie Wei
Software Mentions: 4
Published: over 4 years ago
10.3390/cells9071616
Deep Characterization of Circular RNAs from Human Cardiovascular Cell Models and Cardiac TissueCited by: 21
Author(s): Tobias Jakobi, Dominik Siede, Jessica Eschenbach, Andreas W. Heumüller, Martin Busch, Rouven Nietsch, Benjamin Meder, Patrick Most, Stefanie Dimmeler, Johannes Backs, Hugo A. Katus, Christoph Dieterich
Software Mentions: 3
Published: over 4 years ago
10.3390/ijms21175972
Circular RNAs in Hematopoiesis with a Focus on Acute Myeloid Leukemia and Myelodysplastic SyndromeCited by: 5
Author(s): Michaela Dostálová Merkerová, Zdeněk Krejčík, Katarína Szikszai, Dávid Kundrát
Software Mentions: 2
Published: about 4 years ago