Projects: pypi: circtools
https://packages.ecosyste.ms/registries/pypi.org/packages/circtools
circtools - a circular RNA toolbox
14 versions
Latest release: about 3 years ago
67 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Jakobi Lab (organization)
Studying the interplay of coding and non-coding RNAs, such as the novel class of circRNAs in heart disease Academic
Studying the interplay of coding and non-coding RNAs, such as the novel class of circRNAs in heart disease Academic
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning circtools 7
10.3389/fgene.2020.00548
Rcirc: An R Package for circRNA Analyses and VisualizationCited by: 8
Author(s): Peisen Sun, Haoming Wang, Guanglin Li
Software Mentions: 11
Published: about 6 years ago
10.3389/fgene.2019.00981
CircCode: A Powerful Tool for Identifying circRNA Coding AbilityCited by: 49
Author(s): Peisen Sun, Guanglin Li
Software Mentions: 9
Published: almost 7 years ago
10.3390/ijms21010293
Docker4Circ: A Framework for the Reproducible Characterization of circRNAs from RNA-Seq DataCited by: 8
Author(s): Giulio Ferrero, Nicola Licheri, Lucia Coscujuela Tarrero, Carlo De Intinis, Valentina Miano, Raffaele Calogero, Francesca Cordero, Michele De Bortoli, Marco Beccuti
Software Mentions: 8
Published: over 6 years ago
10.1186/s13059-021-02300-7
riboCIRC: a comprehensive database of translatable circRNAsCited by: 39
Author(s): Huihui Li, Mingzhe Xie, Yan Wang, Ludong Yang, Zhi Xie
Software Mentions: 6
Published: over 5 years ago
10.1155/2020/9084901
FcircSEC: An R Package for Full Length circRNA Sequence Extraction and ClassificationCited by: 7
Author(s): Tofazzal Hossain, Yin Peng, Shijie Feng, Yanjie Wei
Software Mentions: 4
Published: about 6 years ago
10.3390/cells9071616
Deep Characterization of Circular RNAs from Human Cardiovascular Cell Models and Cardiac TissueCited by: 21
Author(s): Tobias Jakobi, Dominik Siede, Jessica Eschenbach, Andreas W. Heumüller, Martin Busch, Rouven Nietsch, Benjamin Meder, Patrick Most, Stefanie Dimmeler, Johannes Backs, Hugo A. Katus, Christoph Dieterich
Software Mentions: 3
Published: about 6 years ago
10.3390/ijms21175972
Circular RNAs in Hematopoiesis with a Focus on Acute Myeloid Leukemia and Myelodysplastic SyndromeCited by: 5
Author(s): Michaela Dostálová Merkerová, Zdeněk Krejčík, Katarína Szikszai, Dávid Kundrát
Software Mentions: 2
Published: almost 6 years ago