Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2019.00981

https://doi.org/10.3389/fgene.2019.00981

Cited by: 49
Author(s): Peisen Sun, Guanglin Li
Published: over 4 years ago

Software Mentions 9

bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
cran: BASiNET
Classification of RNA Sequences using Complex Network Theory
Papers that mentioned: 3
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: CIRCexplorer
A combined strategy to identify circular RNAs (circRNAs and ciRNAs)
Papers that mentioned: 99
pypi: circtools
circtools - a circular RNA toolbox
Papers that mentioned: 7
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: rpy2
Python interface to the R language (embedded R)
Papers that mentioned: 40