Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: andi

https://packages.ecosyste.ms/registries/pypi.org/packages/andi

Library for annotation-based dependency injection
5 versions
Latest release: almost 4 years ago
2 dependent packages
3,295 downloads last month

Papers Mentioning andi 10

10.1186/s13059-019-1755-7
Benchmarking of alignment-free sequence comparison methods
Cited by: 134
Author(s): Andrzej Zieleziński, Hani Z. Girgis, Guillaume Bernard, Chris-André Leimeister, Kujin Tang, Thomas Dencker, Anna Katharina Lau, Sophie Röhling, Jae Jin Choi, Michael S. Waterman, Matteo Comin, Sung‐Hou Kim, Susana Vinga, Jonas S. Almeida, Cheong Xin Chan, Benjamin James, Fengzhu Sun, Burkhard Morgenstern, Wojciech M. Karłowski
Software Mentions: 8
Published: over 5 years ago
10.3390/life6010011
Support Values for Genome Phylogenies
Cited by: 8
Author(s): Fabian Klötzl, Bernhard Haubold
Software Mentions: 4
Published: over 8 years ago
10.1186/s12864-020-06871-w
Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria
Cited by: 29
Author(s): Alice Feurtey, Cécile Lorrain, Daniel Croll, Christoph Eschenbrenner, Michael Freitag, Michael Habig, Janine Haueisen, Mareike Möller, Klaas Schotanus, Eva H. Stukenbrock
Software Mentions: 4
Published: about 4 years ago
10.7717/peerj.6984
CAM: an alignment-free method to recover phylogenies using codon aversion motifs
Cited by: 8
Author(s): Justin Miller, Lauren M. McKinnon, Michael F. Whiting, Perry G. Ridge
Software Mentions: 2
Published: over 5 years ago
10.1093/bioinformatics/btz903
<tt>Phylonium</tt>: fast estimation of evolutionary distances from large samples of similar genomes
Cited by: 11
Author(s): Fabian Klötzl, Bernhard Haubold
Software Mentions: 2
Published: almost 5 years ago
10.1186/s13059-019-1632-4
Skmer: assembly-free and alignment-free sample identification using genome skims
Cited by: 75
Author(s): Shahab Sarmashghi, Kristine Bohmann, M. Thomas P. Gilbert, Vineet Bafna, Siavash Mirarab
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0232260
Codon Pairs are Phylogenetically Conserved: A comprehensive analysis of codon pairing conservation across the Tree of Life
Cited by: 7
Author(s): Justin Miller, Lauren M. McKinnon, Michael F. Whiting, John S. K. Kauwe, Perry G. Ridge
Software Mentions: 1
Published: over 4 years ago
10.3389/fmicb.2016.00270
Global MLST of Salmonella Typhi Revisited in Post-genomic Era: Genetic Conservation, Population Structure, and Comparative Genomics of Rare Sequence Types
Cited by: 26
Author(s): Kien-Pong Yap, Wingkin Ho, Han Ming Gan, Lay Ching Chai, Kwai Lin Thong
Software Mentions: 1
Published: over 8 years ago
10.1186/s13015-015-0032-x
Estimating evolutionary distances between genomic sequences from spaced-word matches
Cited by: 50
Author(s): Burkhard Morgenstern, Bingyao Zhu, Sebastian Horwege, Chris André Leimeister
Software Mentions: 1
Published: almost 10 years ago
10.1186/s13015-017-0118-8
Phylogeny reconstruction based on the length distribution of k-mismatch common substrings
Cited by: 18
Author(s): Burkhard Morgenstern, Svenja Schöbel, Chris-André Leimeister
Software Mentions: 1
Published: almost 7 years ago