Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-019-1755-7

https://doi.org/10.1186/s13059-019-1755-7

Benchmarking of alignment-free sequence comparison methods

Cited by: 134
Author(s): Andrzej Zieleziński, Hani Z. Girgis, Guillaume Bernard, Chris-André Leimeister, Kujin Tang, Thomas Dencker, Anna Katharina Lau, Sophie Röhling, Jae Jin Choi, Michael S. Waterman, Matteo Comin, Sung‐Hou Kim, Susana Vinga, Jonas S. Almeida, Cheong Xin Chan, Benjamin James, Fengzhu Sun, Burkhard Morgenstern, Wojciech M. Karłowski
Published: over 5 years ago

Software Mentions 8

bioconductor: CAFE
Chromosmal Aberrations Finder in Expression data
Papers that mentioned: 251
cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
pypi: alfpy
Alignment-free package to compare DNA/RNA/protein sequences (bioinformatics).
Papers that mentioned: 1
pypi: andi
Library for annotation-based dependency injection
Papers that mentioned: 10
pypi: google
Python bindings to the Google search engine.
Papers that mentioned: 88
pypi: kr
Utils to work with json
Papers that mentioned: 2
pypi: mash
Python lib for converting dict to objects recursive
Papers that mentioned: 28
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431