Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-020-06871-w

https://doi.org/10.1186/s12864-020-06871-w

Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria

Cited by: 29
Author(s): Alice Feurtey, Cécile Lorrain, Daniel Croll, Christoph Eschenbrenner, Michael Freitag, Michael Habig, Janine Haueisen, Mareike Möller, Klaas Schotanus, Eva H. Stukenbrock
Published: about 4 years ago

Software Mentions 4

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

pypi: andi

Library for annotation-based dependency injection
Papers that mentioned: 10

pypi: Circos

Circos plots in Python!
Papers that mentioned: 2,252

pypi: eggnog-mapper

Fast functional annotation of novel sequences using eggNOG orthology assignments.
Papers that mentioned: 41