Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: HAllA

https://packages.ecosyste.ms/registries/pypi.org/packages/HAllA

HAllA: Hierarchical All-against All Association Testing
52 versions
Latest release: about 3 years ago
120 downloads last month

Papers Mentioning HAllA 9

Baseline microbiota composition modulates antibiotic-mediated effects on the gut microbiota and host
Cited by: 43
Author(s): Aonghus Lavelle, Thomas Hoffmann, Hang-Phuong Pham, Philippe Langella, Éric Guédon, Harry Sokol
Software Mentions: 16
Published: over 5 years ago

10.3390/cancers12051142

Integrative Analysis of Fecal Metagenomics and Metabolomics in Colorectal Cancer
Cited by: 55
Author(s): Marc Clos-García, Koldo Garcia, Cristina Alonso, Marta Iruarrizaga‐Lejarreta, Mauro D’Amato, Anais Crespo, Águeda Iglesias, Joaquín Cubiella, Luís Bujanda, Juan Manuel Falcón‐Pérez
Software Mentions: 14
Published: over 4 years ago

10.1128/mSystems.00200-18

Antimicrobial Chemicals Associate with Microbial Function and Antibiotic Resistance Indoors
Cited by: 59
Author(s): Ashkaan K. Fahimipour, Sarah Ben Maamar, Alexander McFarland, Ryan A. Blaustein, Jing Chen, A. Glawe, Jeff Kline, Jessica L. Green, Rolf U. Halden, Kevin Van Den Wymelenberg, Curtis Huttenhower, Erica M. Hartmann
Software Mentions: 4
Published: about 6 years ago

10.3389/fcimb.2021.712381

Moderate-Intensity Physical Exercise Affects the Exercise Performance and Gut Microbiota of Mice
Cited by: 15
Author(s): Wenqian Yang, Yuqian Liu, Guang Yang, Binglin Meng, Zhicheng Yi, Yang Guan, Mingjian Chen, Pengfei Hou, Haitao Wang, Xiaohui Xu
Software Mentions: 3
Published: about 3 years ago

10.1038/s41598-018-28862-4

Gut Sphingolipid Composition as a Prelude to Necrotizing Enterocolitis
Cited by: 19
Author(s): Brigida Rusconi, Xuntian Jiang, Rohini Sidhu, Daniel S. Ory, Barbara B. Warner, Phillip I. Tarr
Software Mentions: 3
Published: over 6 years ago

10.1164/rccm.202009-3448OC

Inflammatory Endotype–associated Airway Microbiome in Chronic Obstructive Pulmonary Disease Clinical Stability and Exacerbations: A Multicohort Longitudinal Analysis
Cited by: 76
Author(s): Zhang Wang, Nicholas Locantore, Koirobi Haldar, Mohammadali Yavari Ramsheh, Augusta Beech, Wei Ma, James R. Brown, Ruth Tal‐Singer, Michael R. Barer, Mona Bafadhel, Gavin C. Donaldson, Jadwiga A. Wedzicha, Dave Singh, Tom Wilkinson, Bruce E. Miller, Christopher Brightling
Software Mentions: 2
Published: over 3 years ago

10.1128/mBio.00839-19

New Insights into the Intrinsic and Extrinsic Factors That Shape the Human Skin Microbiome
Cited by: 92
Author(s): Pedro A. Dimitriu, Brandon C. Iker, Kausar Malik, Hilary Leung, William W. Mohn, Greg G. Hillebrand
Software Mentions: 2
Published: about 5 years ago

10.3390/metabo10030094

An Integrated Multi-Disciplinary Perspective for Addressing Challenges of the Human Gut Microbiome
Cited by: 13
Author(s): Rohan Shah, Elizabeth McKenzie, Magda Rosin, Snehal Jadhav, Shakuntla Gondalia, Douglas Rosendale, David J. Beale
Software Mentions: 1
Published: over 4 years ago

10.1186/s13020-020-00319-9

Traditional Chinese medicine Biqi capsule compared with leflunomide in combination with methotrexate in patients with rheumatoid arthritis: a randomized controlled trial
Cited by: 5
Author(s): Zhang Wang, Jiaqi Wu, Dongyun Li, Xuan Tang, Yue Zhao, Xiao Cai, Xianghong Chen, Xiumin Chen, Qingchun Huang, Run‐Yue Huang
Software Mentions: 1
Published: over 4 years ago