Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cancers12051142

https://doi.org/10.3390/cancers12051142

Integrative Analysis of Fecal Metagenomics and Metabolomics in Colorectal Cancer

Cited by: 55
Author(s): Marc Clos-García, Koldo Garcia, Cristina Alonso, Marta Iruarrizaga‐Lejarreta, Mauro D’Amato, Anais Crespo, Águeda Iglesias, Joaquín Cubiella, Luís Bujanda, Juan Manuel Falcón‐Pérez
Published: over 4 years ago

Software Mentions 14

bioconductor: ALDEx2
Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account
Papers that mentioned: 136
bioconductor: FELLA
Interpretation and enrichment for metabolomics data
Papers that mentioned: 8
bioconductor: mixOmics
Omics Data Integration Project
Papers that mentioned: 375
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
bioconductor: SIAMCAT
Statistical Inference of Associations between Microbial Communities And host phenoTypes
Papers that mentioned: 6
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: OptimalCutpoints
Computing Optimal Cutpoints in Diagnostic Tests
Papers that mentioned: 68
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: psych
Procedures for Psychological, Psychometric, and Personality Research
Papers that mentioned: 1,085
cran: ROCR
Visualizing the Performance of Scoring Classifiers
Papers that mentioned: 596
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: HAllA
HAllA: Hierarchical All-against All Association Testing
Papers that mentioned: 9
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105