cran: vegan | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0228133

Neonatal microbiota development and the effect of early life antibiotics are determined by two distinct settler types
Cited by: 33
Author(s): Anat Eck, Nicole B. Rutten, Maartje Singendonk, Ger T. Rijkers, Paul H. M. Savelkoul, Clemens B. Meijssen, Clarissa E. Crijns, Johanna H. Oudshoorn, Andries E. Budding, Arine M. Vlieger
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0116345

Avian Egg Odour Encodes Information on Embryo Sex, Fertility and Development
Cited by: 44
Author(s): Ben Webster, William Hayes, Thomas W. Pike
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0060135

Metabolomic Comparison of Saccharomyces cerevisiae and the Cryotolerant Species S. bayanus var. uvarum and S. kudriavzevii during Wine Fermentation at Low Temperature
Cited by: 73
Author(s): María López-Malo, Amparo Querol, José Manuel Guillamón
Software Mentions: 1
Published: over 11 years ago

10.1093/aobpla/plu070

Fine-scale genetic differentiation of a temperate herb: relevance of local environments and demographic change
Cited by: 8
Author(s): Yasuhiro Sato, Hiroshi Kudoh
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0123715

Plant Community Responses to Simultaneous Changes in Temperature, Nitrogen Availability, and Invasion
Cited by: 5
Author(s): Elise S. Gornish, Thomas E. Miller
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0015685

Forest Plant and Bird Communities in the Lau Group, Fiji
Cited by: 15
Author(s): Janet Franklin, David W. Steadman
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0128583

Recovering More than Tree Cover: Herbivores and Herbivory in a Restored Tropical Dry Forest
Cited by: 22
Author(s): Iris Juan-Baeza, Cristina Martínez‐Garza, Ek del‐Val
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-021-96641-9

Seasonal and annual changes in the microbial communities of Ofunato Bay, Japan, based on metagenomics
Cited by: 2
Author(s): Atsushi Kobiyama, Jonaira Rashid, Md. Shaheed Reza, Yuichi Ikeda, Yuma Yamada, Toshiaki Kudo, Naoki Mizusawa, Saki Yanagisawa, Daisuke Ikeda, Shigeru Satō, Toru Ogata, Kazuho Ikeo, Shinnosuke Kaga, Shiho Watanabe, Kimiaki Naiki, Yoshimasa Kaga, Satoshi Segawa, Yumiko Tada, Tatsuya Musashi, Katsuhiko Mineta, Takashi Gojobori, Shugo Watabe
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0075396

Evaluating Ecosystem Services Provided by Non-Native Species: An Experimental Test in California Grasslands
Cited by: 13
Author(s): Cláudia Stein, Lauren M. Hallett, W. Stanley Harpole, Katharine N. Suding
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0126962

Patterns in Species Persistence and Biomass Production in Soil Microcosms Recovering from a Disturbance Reject a Neutral Hypothesis for Bacterial Community Assembly
Cited by: 6
Author(s): Fen-Guo Zhang, Quanguo Zhang
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0197256

Intestinal microbiota composition is altered according to nutritional biorhythms in the leopard coral grouper (Plectropomus leopardus)
Cited by: 31
Author(s): Miyuki Mekuchi, Taiga Asakura, Kenji Sakata, Tomohiko Yamaguchi, Kazuhisa Teruya, Jun Kikuchi
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0228406

The gut bacterial communities across six grasshopper species from a coastal tallgrass prairie
Cited by: 15
Author(s): Melani K. Muratore, Chelse M. Prather, Yvonne Sun
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0136946

The Effect of Long-Term Continuous Cropping of Black Pepper on Soil Bacterial Communities as Determined by 454 Pyrosequencing
Cited by: 114
Author(s): Wu Xiong, Zhigang Li, Hongjun Liu, Cong Xue, Ruifu Zhang, Huasong Wu, Rong Li
Software Mentions: 1
Published: about 9 years ago

10.1186/s40168-017-0291-5

Normal milk microbiome is reestablished following experimental infection with Escherichia coli independent of intramammary antibiotic treatment with a third-generation cephalosporin in bovines
Cited by: 49
Author(s): Erika Ganda, Natália Carrillo Gaeta, Anja Sipka, Brianna Pomeroy, Georgios Oikonomou, Y.H. Schukken, R.C. Bicalho
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0206931

Natural succession and clearcutting as drivers of environmental heterogeneity and beta diversity in North American boreal forests
Cited by: 12
Author(s): Sergio García-Tejero, John R. Spence, John O’Halloran, S. Bourassa, Anne Oxbrough
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0137681

Long Term Development of Gut Microbiota Composition in Atopic Children: Impact of Probiotics
Cited by: 44
Author(s): Nicole B. Rutten, D. M. W. Gorissen, Anat Eck, Laetitia E. M. Niers, Arine M. Vlieger, Isolde Besseling-van der Vaart, Andries E. Budding, Paul H. M. Savelkoul, Cornelis K. van der Ent, Ger T. Rijkers
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0031544

Fire History from Life-History: Determining the Fire Regime that a Plant Community Is Adapted Using Life-Histories
Cited by: 5
Author(s): Graeme Armstrong, Benjamin L. Phillips
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0199810

Enhanced preservation of the human intestinal microbiota by ridinilazole, a novel Clostridium difficile-targeting antibacterial, compared to vancomycin
Cited by: 41
Author(s): Cheleste M. Thorpe, Anne Kane, Julia Yu Fong Chang, Albert Tai, Richard Vickers, David R. Snydman
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0111190

Shifts in Species Interactions Due to the Evolution of Functional Differences between Endemics and Non-Endemics: An Endemic Syndrome Hypothesis
Cited by: 18
Author(s): Courtney E. Gorman, Brad M. Potts, Jennifer A. Schweitzer, Joseph K. Bailey
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0134402

Effects of Residue Management on Decomposition in Irrigated Rice Fields Are Not Related to Changes in the Decomposer Community
Cited by: 21
Author(s): Anja Schmidt, Katharina John, G. S. Arida, Harald Auge, Roland Brandl, Finbarr G. Horgan, Stefan Hotes, Leonardo Márquez, Nico Radermacher, Josef Settele, Volkmar Wolters, Martin Schädler
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0064177

Patterns of Cave Biodiversity and Endemism in the Appalachians and Interior Plateau of Tennessee, USA
Cited by: 62
Author(s): Matthew L. Niemiller, Kirk S. Zigler
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-021-97173-y

Co-occurrence networks reveal the central role of temperature in structuring the plankton community of the Thau Lagoon
Cited by: 10
Author(s): Thomas Trombetta, Francesca Vidussi, Cécile Roques, Sébastien Mas, Marco Scotti, Behzad Mostajir
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0074371

454 Pyrosequencing to Describe Microbial Eukaryotic Community Composition, Diversity and Relative Abundance: A Test for Marine Haptophytes
Cited by: 113
Author(s): Elianne Egge, Lucie Bittner, Tom Andersen, Stéphane Audic, Colomban de Vargas, Bente Edvardsen
Software Mentions: 1
Published: about 11 years ago

10.1186/s40168-018-0477-5

The effect of the timing of exposure to Campylobacter jejuni on the gut microbiome and inflammatory responses of broiler chickens
Cited by: 77
Author(s): Phillippa L. Connerton, Philip J. Richards, Geraldine M Flaujac Lafontaine, Peter M O'Kane, Nacheervan M. Ghaffar, Nicola J. Cummings, Darren Smith, Neville M. Fish, Ian F. Connerton
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0141644

The Impact of the Latest Danian Event on Planktic Foraminiferal Faunas at ODP Site 1210 (Shatsky Rise, Pacific Ocean)
Cited by: 21
Author(s): Sofie Jehle, André Bornemann, Arne Deprez, Robert P. Speijer
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0254257

Multiple drivers of ecological change in Arctic lakes and ponds
Cited by: 0
Author(s): Konrad Gajewski
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0175851

Ocean acidification effects on mesozooplankton community development: Results from a long-term mesocosm experiment
Cited by: 19
Author(s): María Algueró-Muñiz, Santiago Álvarez-Fernández, Peter Thor, Lennart T. Bach, Mario Espósito, Henriette G. Horn, Ursula Ecker, Julia Langer, Jan Taucher, Arne M. Malzahn, Ulf Riebesell, Maarten Boersma
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0072764

Functional Roles Affect Diversity-Succession Relationships for Boreal Beetles
Cited by: 18
Author(s): Heloise Gibb, Therese Johansson, Fredrik Stenbacka, Joakim Hjältén
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0226500

Response of rhizosphere bacterial community of Taxus chinensis var. mairei to temperature changes
Cited by: 4
Author(s): YU Xiang-hua, Xinxing Liu, Xueduan Liu
Software Mentions: 1
Published: almost 5 years ago

10.3390/nu10070907

Betaine Improves Intestinal Functions by Enhancing Digestive Enzymes, Ameliorating Intestinal Morphology, and Enriching Intestinal Microbiota in High-salt stressed Rats
Cited by: 34
Author(s): Haichao Wang, Sisi Li, Shan Fang, Xiaojing Yang, Jie Feng
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0150520

Past Human Disturbance Effects upon Biodiversity are Greatest in the Canopy; A Case Study on Rainforest Butterflies
Cited by: 27
Author(s): Andrew Whitworth, Jaime Villacampa, Alice R. Brown, Ruthmery Pillco Huarcaya, R. S. Downie, Ross MacLeod
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0189957

Ectomycorrhizal fungal communities in endangered Pinus amamiana forests
Cited by: 17
Author(s): Masaya Murata, Seiichi Kanetani, Kazuhide Nara
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0053289

Changes in Phlebotomine Sand Fly Species Composition Following Insecticide Thermal Fogging in a Rural Setting of Western Panamá
Cited by: 25
Author(s): José E. Calzada, Azäel Saldaña, Chystrie Rigg, Anayansí Valderrama, Luz Romero, Luis Fernando Chaves
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0086291

Parrotfish Size: A Simple yet Useful Alternative Indicator of Fishing Effects on Caribbean Reefs?
Cited by: 50
Author(s): Henri Vallès, Hazel A. Oxenford
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0167764

Emerging New Crop Pests: Ecological Modelling and Analysis of the South American Potato Psyllid Russelliana solanicola (Hemiptera: Psylloidea) and Its Wild Relatives
Cited by: 16
Author(s): Mindy M. Syfert, Liliya Štarhová Serbina, Daniel Burckhardt, Sandra Knapp, Diana M. Percy
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0173450

Regional changes in psychotropic use among Finnish persons with newly diagnosed Alzheimer’s disease in 2005-2011
Cited by: 6
Author(s): Anna‐Maija Tolppanen, Ari Voutilainen, Heidi Taipale, Antti Tanskanen, Piia Lavikainen, Marjaana Koponen, Jari Tiihonen, Sirpa Hartikainen
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0156232

Post-Disturbance Stability of Fish Assemblages Measured at Coarse Taxonomic Resolution Masks Change at Finer Scales
Cited by: 27
Author(s): Daniela Ceccarelli, Michael J. Emslie, Zoe T. Richards
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0065435

Sea Otters Homogenize Mussel Beds and Reduce Habitat Provisioning in a Rocky Intertidal Ecosystem
Cited by: 25
Author(s): Gerald G. Singh, Russell W. Markel, Rebecca G. Martone, Anne K. Salomon, Christopher D. G. Harley, Kai M. A. Chan
Software Mentions: 1
Published: over 11 years ago

10.1186/s40168-015-0088-3

Athletic equipment microbiota are shaped by interactions with human skin
Cited by: 37
Author(s): Mariah Wood, Sean M. Gibbons, Simon Lax, Tifani W. Eshoo-Anton, Sarah M. Owens, Suzanne Kennedy, Jack A. Gilbert, Jarrad Hampton-Marcell
Software Mentions: 1
Published: over 9 years ago

10.1186/s40168-018-0409-4

Spatial scale affects the relative role of stochasticity versus determinism in soil bacterial communities in wheat fields across the North China Plain
Cited by: 253
Author(s): Yu Shi, Yuntao Li, Xingjia Xiang, Run‐Cang Sun, Teng Yang, Dan He, Kaoping Zhang, Yingying Ni, Yong‐Guan Zhu, Jonathan M. Adams, Haiyan Chu
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0074136

Increasing Seriousness of Plant Invasions in Croplands of Eastern China in Relation to Changing Farming Practices: A Case Study
Cited by: 8
Author(s): Guoqi Chen, HE Yun-he, Sheng Qiang
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0063794

Ethanol Diverts Early Neuronal Differentiation Trajectory of Embryonic Stem Cells by Disrupting the Balance of Lineage Specifiers
Cited by: 30
Author(s): Rosa Sánchez‐Alvarez, Saurabh Gayen, Rajanikanth Vadigepalli, Helen Anni
Software Mentions: 1
Published: over 11 years ago

10.3390/antibiotics9030120

Antibiotic Resistance Genes in Antibiotic-Free Chicken Farms
Cited by: 12
Author(s): Yuhong Liu, Mike Dyall‐Smith, Marc S. Marenda, Hang‐Wei Hu, Glenn F. Browning, Helen Billman‐Jacobe
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0183107

Declining survival across invasion history for Microstegium vimineum
Cited by: 4
Author(s): Chelsea E. Cunard, Richard A. Lankau
Software Mentions: 1
Published: over 7 years ago

10.1186/s40168-019-0688-4

Unraveling the diversity of sedimentary sulfate-reducing prokaryotes (SRP) across Tibetan saline lakes using epicPCR
Cited by: 17
Author(s): Huayu Qin, Shang Wang, Kai Feng, Zhili He, Marko Virta, Weiguo Hou, Hailiang Dong, Ye Deng
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0086995

Metamorphosis of a Butterfly-Associated Bacterial Community
Cited by: 135
Author(s): Tobin J. Hammer, W. Owen McMillan, Noah Fierer
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0226849

Edible ectomycorrhizal fungi and Cistaceae. A study on compatibility and fungal ecological strategies
Cited by: 6
Author(s): Rui Albuquerque-Martins, Pedro Carvalho, Daniel Pereira Miranda, Maria Teresa Gonçalves, António Portugal
Software Mentions: 1
Published: almost 5 years ago

10.3390/nu7031798

Changes in Composition of Caecal Microbiota Associated with Increased Colon Inflammation in Interleukin-10 Gene-Deficient Mice Inoculated with Enterococcus Species
Cited by: 38
Author(s): Shalome A. Bassett, Wayne Young, Matthew P. G. Barnett, Adrian L. Cookson, Warren C. McNabb, Nicole C. Roy
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0172989

Ice-cover is the principal driver of ecological change in High Arctic lakes and ponds
Cited by: 52
Author(s): Katherine Griffiths, Neal Michelutti, Madeline Sugar, Marianne S. V. Douglas, John P. Smol
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0251638

Spatiotemporal patterns of variability in the abundance and distribution of winter-spawned pelagic juvenile rockfish in the California Current
Cited by: 11
Author(s): John C. Field, Rebecca R. Miller, Jarrod A. Santora, Nick Tolimieri, Melissa A. Haltuch, Richard D. Brodeur, Toby D. Auth, Edward J. Dick, Melissa Monk, Keith M. Sakuma, Brian K. Wells
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0212430

Human disturbance impacts the integrity of sacred church forests, Ethiopia
Cited by: 35
Author(s): Catherine L. Cardelús, Carrie L. Woods, Amare Bitew Mekonnen, Sonya Dexter, Peter Scull, Berhanu Abraha Tsegay
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0228796

Biogeographical variation in diurnal behaviour of Acanthaster planci versus Acanthaster cf. solaris
Cited by: 6
Author(s): Deborah Burn, Samuel A. Matthews, Ciemon F. Caballes, Josie F. Chandler, Morgan S. Pratchett
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0166783

Multiple Browsers Structure Tree Recruitment in Logged Temperate Forests
Cited by: 9
Author(s): Edward K. Faison, Stephen DeStefano, David R. Foster, Joshua M. Rapp, Justin A. Compton
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0255056

Short-term plant-community responses to large mammalian herbivore exclusion in a rewilded Javan savanna
Cited by: 1
Author(s): Arjun B. Potter, Muhammad Imron, Satyawan Pudyatmoko, Matthew C. Hutchinson
Software Mentions: 1
Published: over 3 years ago

10.1186/s40168-018-0424-5

A reservoir of ‘historical’ antibiotic resistance genes in remote pristine Antarctic soils
Cited by: 209
Author(s): Marc W. Van Goethem, Rian Pierneef, Oliver Bezuidt, Yves Van de Peer, Don A. Cowan, Thulani P. Makhalanyane
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0048755

Revealing the Hyperdiverse Mite Fauna of Subarctic Canada through DNA Barcoding
Cited by: 63
Author(s): Monica R Young, Valerie M. Behan‐Pelletier, Paul D. N. Hebert
Software Mentions: 1
Published: about 12 years ago

10.1186/s40168-019-0757-8

Suppressed N fixation and diazotrophs after four decades of fertilization
Cited by: 177
Author(s): Kunkun Fan, Manuel Delgado‐Baquerizo, Xisheng Guo, Daozhong Wang, Yanhua Wu, Mingshan Zhu, Wei Yu, Huaiying Yao, Yong‐Guan Zhu, Haiyan Chu
Software Mentions: 1
Published: about 5 years ago

10.1186/s40168-017-0305-3

The urinary microbiota of men and women and its changes in women during bacterial vaginosis and antibiotic treatment
Cited by: 134
Author(s): Cornelia Gottschick, Zhi-Luo Deng, Marius Vital, Clarissa Masur, Christoph Abels, Dietmar H. Pieper, Irene Wagner‐Döbler
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0151622

Decreasing Nitrogen Fertilizer Input Had Little Effect on Microbial Communities in Three Types of Soils
Cited by: 11
Author(s): Hailing Yu, Qiang Gao, Zeqiang Shao, Anning Ying, Yuyang Sun, Jingwei Liu, Wei Mao, Bin Zhang
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0208230

Microbial community composition and diversity in the Indian Ocean deep sea REY-rich muds
Cited by: 11
Author(s): Shuyan Wang, Miao Yu, Jiaqiang Wei, Mu Huang, Xuefa Shi, Hao Chen
Software Mentions: 1
Published: almost 6 years ago

10.1186/s40168-018-0580-7

An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men
Cited by: 95
Author(s): Abigail J. S. Armstrong, Michael J. Shaffer, Nichole M. Nusbacher, Christine Griesmer, Suzanne Fiorillo, Jennifer M. Schneider, C. Preston Neff, Sam X. Li, Andrew P. Fontenot, Thomas Campbell, Brent E. Palmer, Catherine Lozupone
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0033373

Wildfires in Bamboo-Dominated Amazonian Forest: Impacts on Above-Ground Biomass and Biodiversity
Cited by: 37
Author(s): Jos Barlow, Juliana M. Silveira, Luiz Augusto Macedo Mestre, Rafael Andrade, Gabriela Camacho D'Andrea, Júlio Louzada, Fernando Z. Vaz‐de‐Mello, Izaya Numata, Sébastien Lacau, Mark A. Cochrane
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0193822

Simulated tri-trophic networks reveal complex relationships between species diversity and interaction diversity
Cited by: 9
Author(s): Nicholas A. Pardikes, Will Lumpkin, Paul J. Hurtado, Lee A. Dyer
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0161871

Activity Patterns of St. Louis Encephalitis and West Nile Viruses in Free Ranging Birds during a Human Encephalitis Outbreak in Argentina
Cited by: 17
Author(s): Luis Adrián Díaz, Agustín Quaglia, Brenda Konigheim, Analia Silvana Boris, Javier Aguilar, Nicholas Komar, Marta Silvia Contigiani
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0128379

Reexamining Sample Size Requirements for Multivariate, Abundance-Based Community Research: When Resources are Limited, the Research Does Not Have to Be
Cited by: 44
Author(s): Frank L. Forcino, Lindsey R. Leighton, Pamela Twerdy, James Cahill
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-021-98876-y

Multidisciplinary analysis of Italian Alpine wildflower honey reveals criticalities, diversity and value
Cited by: 12
Author(s): Valeria Leoni, Luca Giupponi, Radmila Pavlović, Carla Gianoncelli, Francisco Miguel Cecati, Elia Ranzato, Simona Martinotti, Davide Pedrali, Annamaria Giorgi, Sara Panseri
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0078866

The Diversity and Distribution of Fungi on Residential Surfaces
Cited by: 139
Author(s): Rachel I. Adams, Marzia Miletto, John W. Taylor, Thomas D. Bruns
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0222646

Low genetic differentiation yet high phenotypic variation in the invasive populations of Spartina alterniflora in Guangxi, China
Cited by: 7
Author(s): Feifei Li, Lu Gong, Junsheng Li, Xiaoyan Liu, Caiyun Zhao
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0029380

Assessment of Variation in Bacterial Composition among Microhabitats in a Mangrove Environment Using DGGE Fingerprints and Barcoded Pyrosequencing
Cited by: 83
Author(s): Daniel F. R. Cleary, Kornelia Smalla, Lêda C. Mendonça-Hagler, Newton C. M. Gomes
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0132879

Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem
Cited by: 8
Author(s): Chen Zhu, Wenliang Wu, Xingling Shao, L i Li, Yanbin Guo, Guo-Chun Ding
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0173811

Environmental reservoirs of pathogenic mycobacteria across the Ethiopian biogeographical landscape
Cited by: 34
Author(s): Hayley C. King, Tanya Khera-Butler, Phillip James, Brian B. Oakley, Girume Erenso, Abraham Aseffa, Rob Knight, Elizabeth M. H. Wellington, Orin Courtenay
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0069174

Hierarchical Dynamics of Ecological Communities: Do Scales of Space and Time Match?
Cited by: 15
Author(s): David G. Angeler, Emma Göthe, Richard K. Johnson
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0115733

Where Is the Extended Phenotype in the Wild? The Community Composition of Arthropods on Mature Oak Trees Does Not Depend on the Oak Genotype
Cited by: 9
Author(s): Martin M. Goßner, Martin Brändle, Roland Brandl, Johannes Bail, Jörg Müller, Lars Opgenoorth
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0138432

Large-Scale Biomonitoring of Remote and Threatened Ecosystems via High-Throughput Sequencing
Cited by: 147
Author(s): Joel F. Gibson, Shadi Shokralla, Colin J. Curry, Donald J. Baird, Wendy Monk, Ian W. King, Mehrdad Hajibabaei
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0160259

Impact of Commercial Strain Use on Saccharomyces cerevisiae Population Structure and Dynamics in Pinot Noir Vineyards and Spontaneous Fermentations of a Canadian Winery
Cited by: 31
Author(s): Jonathan T. Martiniuk, Braydon Pacheco, G. Russell, Stephanie Tong, Ian Backstrom, Vivien Measday
Software Mentions: 1
Published: over 8 years ago

10.3390/nu10020230

Inadequate Iodine Intake in Population Groups Defined by Age, Life Stage and Vegetarian Dietary Practice in a Norwegian Convenience Sample
Cited by: 58
Author(s): Anne Lise Brantsæter, Helle Katrine Knutsen, Nina Cathrine Johansen, Kristine Aastad Nyheim, Iris Erlund, Helle Margrete Meltzer, Sigrun Henjum
Software Mentions: 1
Published: almost 7 years ago

10.1038/s42003-021-01949-x

Population genomics and antimicrobial resistance dynamics of Escherichia coli in wastewater and river environments
Cited by: 11
Author(s): Jose F Delgado-Blas, Cristina M. Ovejero, Sophia David, Natalia Montero, William Calero-Cáceres, M. Pilar Garcillán-Barcia, Fernando de la Cruz, Maite Muniesa, David M. Aanensen, Bruno González‐Zorn
Software Mentions: 1
Published: over 3 years ago

10.3390/ani10081292

Antimicrobial Effects of Black Soldier Fly and Yellow Mealworm Fats and Their Impact on Gut Microbiota of Growing Rabbits
Cited by: 27
Author(s): Sihem Dabbou, Ilario Ferrocino, Laura Gasco, Achille Schiavone, A. Trocino, Gerolamo Xiccato, A. C. Barroeta, Sandra Maione, Dominga Soglia, Luca Simone Cocolin, Francesco Gai, Daniele Nucera
Software Mentions: 1
Published: over 4 years ago

10.1038/s42003-018-0274-5

Biotic interactions are an unexpected yet critical control on the complexity of an abiotically driven polar ecosystem
Cited by: 40
Author(s): Charles K. Lee, Daniel C. Laughlin, Eric Bottos, Tancredi Caruso, Kurt Joy, John E. Barrett, Lars Brabyn, Uffe N. Nielsen, Byron J. Adams, Diana H. Wall, D. W. Hopkins, Stephen B. Pointing, Ian R. McDonald, Don A. Cowan, Jonathan C. Banks, Glen Stichbury, Irfon Jones, Peyman Zawar-Reza, Marwan Katurji, Ian D. Hogg, Ashley D. Sparrow, B. C. Storey, T.G. Allan Green, S. Craig Cary
Software Mentions: 1
Published: almost 6 years ago

10.1038/s42003-018-0221-5

Pre-obese children’s dysbiotic gut microbiome and unhealthy diets may predict the development of obesity
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Author(s): Simone Rampelli, Kathrin Guenther, Silvia Turroni, Maike Wolters, Toomas Veidebaum, Yiannis Kourides, Dénes Molnár, Lauren Lissner, Alfonso Benı́tez-Páez, Yolanda Sanz, Arno Fraterman, Nathalie Michels, Patrizia Brigidi, Marco Candela, Wolfgang Ahrens
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.csbj.2019.05.003

A Rhizosphere-Derived Consortium of Bacillus subtilis and Trichoderma harzianum Suppresses Common Scab of Potato and Increases Yield
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Author(s): Zhenshuo Wang, Yan Li, Lubo Zhuang, Yue Yu, Jia Liu, Lixia Zhang, Zhen-Jiang Gao, Yufeng Wu, Wa Gao, Guo-Chun Ding, Qi Wang
Software Mentions: 1
Published: almost 6 years ago

10.1093/conphys/coz023

OUP accepted manuscript
Cited by: 3
Author(s): William M. Twardek, Jacqueline M. Chapman, Kristina M. Miller, Mark Beere, S Li, Karia H. Kaukinen, Andy J. Danylchuk, Steven J. Cooke
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.dib.2020.105542

Bambara groundnut soil metagenomics data
Cited by: 0
Author(s): Caroline Fadeke Ajilogba, Olubukola Oluranti Babalola
Software Mentions: 1
Published: over 4 years ago

10.1186/s40168-017-0245-y

Childhood BMI in relation to microbiota in infancy and lifetime antibiotic use
Cited by: 86
Author(s): Katri Korpela, Maartje A.C. Zijlmans, Mikael Kuitunen, Kaarina Kukkonen, Erkki Savilahti, Anne Salonen, Carolina de Weerth, Willem M. de Vos
Software Mentions: 1
Published: over 7 years ago

10.1002/ece3.1770

Plant–plant interactions as a mechanism structuring plant diversity in a Mediterranean semi‐arid ecosystem
Cited by: 34
Author(s): Antonio I. Arroyo, Yolanda Pueyo, Hugo Sáiz, Concepción L. Alados
Software Mentions: 1
Published: about 9 years ago

10.1016/j.soilbio.2015.01.016

Microbial community composition shapes enzyme patterns in topsoil and subsoil horizons along a latitudinal transect in Western Siberia
Cited by: 92
Author(s): Jörg Schnecker, Birgit Wild, Mounir Takriti, Ricardo J. Eloy Alves, Norman Gentsch, Antje Gittel, Angelika Hofer, Karoline Klaus, Anna Knoltsch, Nikolay Lashchinskiy, Robert Mikutta, Andreas Richter
Software Mentions: 1
Published: over 9 years ago

10.1016/j.still.2020.104754

Wheat growth responses to soil mechanical impedance are dependent on phosphorus supply
Cited by: 7
Author(s): Xin Wang, Jianbo Shen, Peter Hedden, Andrew L. Phillips, Stephen G. Thomas, Yaoxiang Ge, R. W. Ashton, W. R. Whalley
Software Mentions: 1
Published: almost 4 years ago

10.1002/ece3.7369

Characterization of Salix nigra floral insect community and activity of three native Andrena bees
Cited by: 5
Author(s): Sandra Simon, Ken Keefover‐Ring, Yong‐Lak Park, Gina M. Wimp, Julianne Grady, Stephen P. DiFazio
Software Mentions: 1
Published: over 3 years ago

10.1002/ece3.1246

Are all species necessary to reveal ecologically important patterns?
Cited by: 39
Author(s): Edwin Pos, Juan Ernesto Guevara Andino, Daniel Sabatier, Jean‐François Molino, Nigel C. A. Pitman, Hugo F. Mogollón, David Neill, Carlos Cerón, Gonzalo Galilaeo Rivas, Anthony F Di Fiore, Raquel Thomas, Milton Tirado, Kenneth R. Young, Ophelia Wang, Rodrigo Sierra, Roosevelt García‐Villacorta, Roderick Zagt, Walter A. Palacios, Milton Aulestia, Hans ter Steege
Software Mentions: 1
Published: almost 10 years ago

10.1002/ece3.2875

The shift from plant–plant facilitation to competition under severe water deficit is spatially explicit
Cited by: 41
Author(s): Michael J. O’Brien, Francisco I. Pugnaire, Cristina Armas, Susana Rodríguez‐Echeverría, Christian Schöb
Software Mentions: 1
Published: over 7 years ago

10.1002/ece3.2773

Stabilizing mechanisms in a food web with an introduced omnivore
Cited by: 8
Author(s): Monica Granados, Sean Duffy, Christopher W. McKindsey, Gregor F. Fussmann
Software Mentions: 1
Published: over 7 years ago

10.1002/ece3.4818

Trait-performance relationships of grassland plant species differ between common garden and field conditions
Cited by: 9
Author(s): Edward B. Breitschwerdt, Ute Jandt, Helge Bruelheide
Software Mentions: 1
Published: almost 6 years ago

10.1002/ece3.6672

Environmental factors affect the response of microbial extracellular enzyme activity in soils when determined as a function of water availability and temperature
Cited by: 18
Author(s): Enrique J. Buch Gómez, José A. Delgado, Juan M. Gonzalez
Software Mentions: 1
Published: over 4 years ago

10.1002/ece3.1585

Discrimination of grasshopper ( <scp>O</scp> rthoptera: <scp>A</scp> crididae) diet and niche overlap using next‐generation sequencing of gut contents
Cited by: 30
Author(s): Beverly McClenaghan, Joel F. Gibson, Shadi Shokralla, Mehrdad Hajibabaei
Software Mentions: 1
Published: over 9 years ago

10.1016/j.syapm.2018.05.003

Identification and distribution of microsymbionts associated with soybean nodulation in Mozambican soils
Cited by: 18
Author(s): Cynthia Gyogluu, Sanjay K. Jaiswal, Stephen Kyei-Boahen, Felix D. Dakora
Software Mentions: 1
Published: about 6 years ago

10.1002/ece3.5360

Reduced vertebrate diversity independent of spatial scale following feral swine invasions
Cited by: 10
Author(s): Matthew R. Ivey, Michael E. Colvin, Bronson K. Strickland, Marcus A. Lashley
Software Mentions: 1
Published: over 5 years ago

10.1016/j.syapm.2019.02.004

Phylogeny and distribution of Bradyrhizobium symbionts nodulating cowpea (Vigna unguiculata L. Walp) and their association with the physicochemical properties of acidic African soils
Cited by: 16
Author(s): Doris K. Puozaa, Sanjay K. Jaiswal, Felix D. Dakora
Software Mentions: 1
Published: over 5 years ago

10.3390/ani11030617

Effects of Rumen-Protected Niacin on Dry Matter Intake, Milk Production, Apparent Total Tract Digestibility, and Faecal Bacterial Community in Multiparous Holstein Dairy Cow during the Postpartum Period
Cited by: 3
Author(s): Gaowa Naren, Xiaoming Zhang, Huanxu Li, Yajing Wang, Jun Zhang, Yangyi Hao, Zhijun Cao, Shengli Li
Software Mentions: 1
Published: over 3 years ago

10.1002/ece3.6689

Habitat matters – Strong genetic and epigenetic differentiation inLinum catharticumfrom dry and wet grasslands
Cited by: 5
Author(s): Ellen Pagel, Peter Poschlod
Software Mentions: 1
Published: over 4 years ago

10.1002/ece3.3887

How scientists perceive the evolutionary origin of human traits: Results of a survey study
Cited by: 1
Author(s): Hanna Tuomisto, Matleena Tuomisto, Jouni T. Tuomisto
Software Mentions: 1
Published: over 6 years ago

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