Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: softImpute

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/softImpute

Matrix Completion via Iterative Soft-Thresholded SVD
3 versions
Latest release: over 3 years ago
10 dependent packages
1,896 downloads last month

Papers Mentioning softImpute 12

10.1038/s41598-018-29523-2

Prognostication and Risk Factors for Cystic Fibrosis via Automated Machine Learning
Cited by: 46
Author(s): Ahmed M. Alaa, Mihaela van der Schaar
Software Mentions: 8
Published: over 6 years ago

10.1186/s13059-021-02400-4

mbImpute: an accurate and robust imputation method for microbiome data
Cited by: 23
Author(s): Ruochen Jiang, Wei Vivian Li, Jingyi Jessica Li
Software Mentions: 6
Published: over 3 years ago

Genetic Characterization of a Wheat Association Mapping Panel Relevant to Brazilian Breeding Using a High-Density Single Nucleotide Polymorphism Array
Cited by: 8
Author(s): Greg Mellers, Jorge González Aguilera, Nick Bird, A. L. V. Bonato, Sandro Bonow, E. Caierão, Luciano Consoli, F. M. Santana, James Simmonds, Andrew Steed, G. A. M. Torres, Cristóbal Uauy, Tally I C Wright, P. L. Scheeren, P. Nicholson, James Cockram
Software Mentions: 6
Published: over 4 years ago

10.1186/s13059-020-02129-6

sn-spMF: matrix factorization informs tissue-specific genetic regulation of gene expression
Cited by: 16
Author(s): Yuan He, Surya B. Chhetri, Marios Arvanitis, Kaushik Srinivasan, François Aguet, Kristin Ardlie, Alvaro N. Barbeira, Rodrigo Bonazzola, Hae Kyung Im, Christopher D. Brown, Alexis Battle
Software Mentions: 5
Published: about 4 years ago

10.1186/s12859-020-03592-5

Methylation data imputation performances under different representations and missingness patterns
Cited by: 11
Author(s): Pietro Di Lena, Claudia Sala, Andrea Prodi, Christine Nardini
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pgen.1008009

Reverse GWAS: Using genetics to identify and model phenotypic subtypes
Cited by: 31
Author(s): Andy Dahl, Na Cai, Arthur Ko, Markku Laakso, Päivi Pajukanta, Jonathan Flint, Noah Zaitlen
Software Mentions: 3
Published: over 5 years ago

10.3390/jcm10010103

Increasing the Density of Laboratory Measures for Machine Learning Applications
Cited by: 8
Author(s): Vida Abedi, Jiang Li, Manu Shivakumar, Venkatesh Avula, Durgesh Chaudhary, Matthew Shellenberger, Harshit S. Khara, Yanfei Zhang, Ming Ta Michael Lee, Donna M. Wolk, Mohammed Yeasin, Raquel Hontecillas, Josep Bassaganya‐Riera, Ramin Zand
Software Mentions: 3
Published: almost 4 years ago

10.2196/20597

Missing-Data Handling Methods for Lifelogs-Based Wellness Index Estimation: Comparative Analysis With Panel Data
Cited by: 3
Author(s): Ki‐Hun Kim, Kwang-Jae Kim
Software Mentions: 3
Published: almost 4 years ago

10.2196/medinform.8960

Characterizing and Managing Missing Structured Data in Electronic Health Records: Data Analysis
Cited by: 100
Author(s): Brett K. Beaulieu‐Jones, Daniel R. Lavage, John W Snyder, Jason H. Moore, Sarah A. Pendergrass, Christopher R. Bauer
Software Mentions: 3
Published: over 6 years ago

10.1186/s12284-021-00471-2

Stable and Novel Quantitative Trait Loci (QTL) Confer Narrow Root Cone Angle in an Aerobic Rice (Oryza sativa L.) Production System
Cited by: 11
Author(s): Ricky Vinarao, Christopher Proud, Xiaolu Zhang, Peter Snell, S. Fukai, Jaquie Mitchell
Software Mentions: 2
Published: over 3 years ago

10.1186/s13073-019-0705-z

An unsupervised learning approach to identify novel signatures of health and disease from multimodal data
Cited by: 25
Author(s): Ilan Shomorony, Elizabeth T. Cirulli, Lei Huang, Lori A. Napier, R Heister, Michael A. Hicks, Isaac Cohen, J. C. Yu, Christine Leon Swisher, Natalie M. Schenker-Ahmed, Weizhong Li, Karen E. Nelson, Pamila Brar, Andrew Kahn, Timothy D. Spector, C. Thomas Caskey, J. Craig Venter, David S. Karow, Ewen F. Kirkness, Naisha Shah
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0237724

A new analytical framework for missing data imputation and classification with uncertainty: Missing data imputation and heart failure readmission prediction
Cited by: 14
Author(s): Zhiyong Hu, Dongping Du
Software Mentions: 1
Published: about 4 years ago