Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02400-4

https://doi.org/10.1186/s13059-021-02400-4

mbImpute: an accurate and robust imputation method for microbiome data

Cited by: 23
Author(s): Ruochen Jiang, Wei Vivian Li, Jingyi Jessica Li
Published: over 3 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
Papers that mentioned: 169
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
bioconductor: sparseDOSSA
Sparse Data Observations for Simulating Synthetic Abundance
Papers that mentioned: 2
cran: SAVER
Single-Cell RNA-Seq Gene Expression Recovery
Papers that mentioned: 40
cran: softImpute
Matrix Completion via Iterative Soft-Thresholded SVD
Papers that mentioned: 12