cran: klaR | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0018850

Multiplexed Immunoassay Panel Identifies Novel CSF Biomarkers for Alzheimer's Disease Diagnosis and Prognosis
Cited by: 199
Author(s): Rebecca Craig‐Schapiro, Max Kühn, Chengjie Xiong, Eve H. Pickering, Jingxia Liu, Thomas P. Misko, Richard J. Perrin, Kelly R. Bales, Holly Soares, Anne M. Fagan, David M. Holtzman
Software Mentions: 15
Published: over 13 years ago

10.1371/journal.pone.0215142

Mathematical modeling for the prediction of cerebral white matter lesions based on clinical examination data
Cited by: 7
Author(s): Yuya Shinkawa, Takashi Yoshida, Yohei Onaka, Makoto Ichinose, Kazuo Ishii
Software Mentions: 10
Published: over 5 years ago

10.1186/s13040-016-0086-4

Prediction of donor splice sites using random forest with a new sequence encoding approach
Cited by: 31
Author(s): Prabina Kumar Meher, Tanmaya Kumar Sahu, Atmakuri Ramakrishna Rao
Software Mentions: 9
Published: almost 9 years ago

10.1371/journal.pone.0071218

Novel Three-Step Pseudo-Absence Selection Technique for Improved Species Distribution Modelling
Cited by: 137
Author(s): Senait D. Senay, Susan P. Worner, Takayoshi Ikeda
Software Mentions: 9
Published: over 11 years ago

10.1186/s13059-020-02155-4

Estimating the quality of eukaryotic genomes recovered from metagenomic analysis with EukCC
Cited by: 51
Author(s): Paul Saary, Alex L. Mitchell, Alex Bateman
Software Mentions: 8
Published: about 4 years ago

10.3390/molecules26113475

Unveiling Putative Functions of Mucus Proteins and Their Tryptic Peptides in Seven Gastropod Species Using Comparative Proteomics and Machine Learning-Based Bioinformatics Predictions
Cited by: 13
Author(s): Viroj Tachapuripunya, Sittiruk Roytrakul, Pramote Chumnanpuen, Teerasak E-kobon
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0097678

Evaluation of Toxicogenomics Approaches for Assessing the Risk of Nongenotoxic Carcinogenicity in Rat Liver
Cited by: 16
Author(s): Johannes Eichner, Clemens Wrzodek, Michael Roemer, Heidrun Ellinger‐Ziegelbauer, Andreas Zell
Software Mentions: 7
Published: over 10 years ago

10.3389/fmicb.2018.01100

nifPred: Proteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machine
Cited by: 10
Author(s): Prabina Kumar Meher, Tanmaya Kumar Sahu, Jyotilipsa Mohanty, Shachi Gahoi, P. Supriya, Monendra Grover, Atmakuri Ramakrishna Rao
Software Mentions: 7
Published: over 6 years ago

10.1186/s13643-020-01520-5

Aligning text mining and machine learning algorithms with best practices for study selection in systematic literature reviews
Cited by: 10
Author(s): Evan Popoff, M. Besada, JP Jansen, Shannon Cope, Steve Kanters
Software Mentions: 6
Published: almost 4 years ago

10.1371/journal.pone.0073938

A Toxicogenomic Approach for the Prediction of Murine Hepatocarcinogenesis Using Ensemble Feature Selection
Cited by: 16
Author(s): Johannes Eichner, Nadine Kossler, Clemens Wrzodek, Arno Kalkuhl, Dorthe Bach Toft, Nina Ostenfeldt, V. Espley Richard, Andreas Zell
Software Mentions: 6
Published: about 11 years ago

10.1098/rspb.2021.0393

Quantitative assessment of tarsal morphology illuminates locomotor behaviour in Palaeocene mammals following the end-Cretaceous mass extinction
Cited by: 3
Author(s): Sarah L. Shelley, Stephen L. Brusatte, Thomas E. Williamson
Software Mentions: 6
Published: over 3 years ago

10.3389/fnins.2021.645998

Identification of Diagnostic Markers for Major Depressive Disorder Using Machine Learning Methods
Cited by: 12
Author(s): Zhao Shu, Bao Zhaorigetu, Xinyi Zhao, Maochao Xu, Ming D. Li, Zhongli Yang
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0100736

Structure-Based Prediction of Asparagine and Aspartate Degradation Sites in Antibody Variable Regions
Cited by: 125
Author(s): Jasmin F. Sydow, Florian Lipsmeier, Vincent Larraillet, Maximiliane Hilger, Bjoern Mautz, Michael Mølhøj, Jan Kuentzer, Stefan Klostermann, Juergen Schoch, Hans R. Voelger, Jörg T. Regula, Patrick Cramer, Apollon Papadimitriou, Hubert Kettenberger
Software Mentions: 5
Published: over 10 years ago

10.1186/s12864-016-2729-8

A systematic, large-scale comparison of transcription factor binding site models
Cited by: 13
Author(s): Daniela Hombach, Jana Marie Schwarz, Peter N. Robinson, Markus Schuelke, Dominik Seelow
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-021-90690-w

Comprehensive machine learning based study of the chemical space of herbicides
Cited by: 15
Author(s): Davor Oršolić, Vesna Pehar, Tomislav Šmuc, Višnja Stepanić
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0199314

Novel classification for global gene signature model for predicting severity of systemic sclerosis
Cited by: 1
Author(s): Zariel I. Johnson, Jennifer A. Jones, Avinaba Mukherjee, Dianxu Ren, Carol Feghali‐Bostwick, Yvette P. Conley, Cecelia C. Yates
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-021-93624-8

Appropriate sampling methods and statistics can tell apart fraud from pesticide drift in organic farming
Cited by: 3
Author(s): Albrecht Benzing, Hans‐Peter Piepho, Waqas Ahmed Malik, Maria R. Finckh, Manuel Mittelhammer, Dominic Strempel, Johannes Jaschik, Jochen Neuendorff, Liliana Guamán, José Mancheno, Luís Carlos Alves de Melo, Omar Pavón, Roberto Cangahuamín, Juan-Carlos Ullauri
Software Mentions: 4
Published: over 3 years ago

10.1186/1471-2164-14-648

Combining in silico prediction and ribosome profiling in a genome-wide search for novel putatively coding sORFs
Cited by: 80
Author(s): Jeroen Crappé, Wim Van Criekinge, Geert Trooskens, Eisuke Hayakawa, Walter Luyten, Geert Baggerman, Gerben Menschaert
Software Mentions: 3
Published: almost 12 years ago

10.1038/s41598-020-71924-9

Agricultural land is the main source of stream sediments after conversion of an African montane forest
Cited by: 18
Author(s): Jaqueline Stenfert Kroese, Pedro Velloso Gomes Batista, Suzanne Jacobs, Lutz Breuer, John Quinton, Mariana C. Rufino
Software Mentions: 3
Published: about 4 years ago

10.1038/s41598-020-80570-0

Breath biopsy of breast cancer using sensor array signals and machine learning analysis
Cited by: 23
Author(s): Ya‐Chen Yang, Yi-Chia Wang, Hsien Yu Peng, Chi‐Hsiang Huang
Software Mentions: 3
Published: almost 4 years ago

10.1002/ece3.7175

Age‐ and sex‐related dietary specialization facilitate seasonal resource partitioning in a migratory shorebird
Cited by: 7
Author(s): Laurie A. Hall, Susan E. W. De La Cruz, Isa Woo, Tomohiro Kuwae, John Y. Takekawa
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0205408

A benthic bioindicator reveals distinct land and ocean–Based influences in an urbanized coastal embayment
Cited by: 3
Author(s): Samantha Munroe, Jack Coates-Marnane, Michele A. Burford, Brian Fry
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pbio.1001840

Machine Learning Helps Identify CHRONO as a Circadian Clock Component
Cited by: 107
Author(s): Ron C. Anafi, Yool Lee, Trey K. Sato, Anand Venkataraman, Chidambaram Ramanathan, İbrahim Halil Kavaklı, Michael Hughes, Julie E. Baggs, Jacqueline Growe, Andrew C. Liu, Junhyong Kim, John B. Hogenesch
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2105-12-S10-S3

Selecting a single model or combining multiple models for microarray-based classifier development? – A comparative analysis based on large and diverse datasets generated from the MAQC-II project
Cited by: 14
Author(s): Minjun Chen, Leming Shi, Reagan Kelly, Roger Perkins, Hong Fang, Weida Tong
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0153138

New Seasonal Shift in In-Stream Diurnal Nitrate Cycles Identified by Mining High-Frequency Data
Cited by: 26
Author(s): Alice H. Aubert, Lutz Breuer
Software Mentions: 2
Published: over 8 years ago

10.3389/fimmu.2014.00447

Elucidation of Pathways Driving Asthma Pathogenesis: Development of a Systems-Level Analytic Strategy
Cited by: 15
Author(s): M.L. Walker, Kathryn E. Holt, Gary P. Anderson, Shu Mei Teo, Peter D. Sly, Patrick G. Holt, Michael Inouye
Software Mentions: 2
Published: about 10 years ago

10.1038/s41598-018-32619-4

Sharing an environment with sick conspecifics alters odors of healthy animals
Cited by: 16
Author(s): Stephanie S. Gervasi, Maryanne Opiekun, Talia Martin, Gary K. Beauchamp, Bruce A. Kimball
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-019-41383-y

A risk stratification tool for hospitalisation in Australia using primary care data
Cited by: 14
Author(s): Sankalp Khanna, David A. Rolls, Justin Boyle, Yang Xie, Rajiv Jayasena, Marienne Hibbert, Michael P. Georgeff
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0049734

Sexual Dimorphism in Sturnira lilium (Chiroptera, Phyllostomidae): Can Pregnancy and Pup Carrying Be Responsible for Differences in Wing Shape?
Cited by: 34
Author(s): Nícholas F. de Camargo, Hernani Oliveira
Software Mentions: 2
Published: about 12 years ago

10.1371/journal.pone.0244288

Distinguishing Discoid and Centripetal Levallois methods through machine learning
Cited by: 11
Author(s): Irene González-Molina, Blanca Jiménez-García, José‐Manuel Maíllo‐Fernández, Enrique Baquedano, Manuel Domı́nguez-Rodrigo
Software Mentions: 2
Published: almost 4 years ago

10.1007/s10071-013-0660-9

Meaning attribution in the West African green monkey: influence of call type and context
Cited by: 28
Author(s): Tabitha Price, Julia Fischer
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0067004

Sequential Modelling of the Effects of Mass Drug Treatments on Anopheline-Mediated Lymphatic Filariasis Infection in Papua New Guinea
Cited by: 23
Author(s): Bhavna Singh, Moses J. Bockarie, Manoj Gambhir, Peter Siba, Daniel J. Tisch, James W. Kazura, Edwin Michael
Software Mentions: 1
Published: over 11 years ago

Ecosyste.ms: Papers

Projects: cran: klaR

Papers Mentioning klaR 33