Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-016-2729-8

https://doi.org/10.1186/s12864-016-2729-8

A systematic, large-scale comparison of transcription factor binding site models

Cited by: 13
Author(s): Daniela Hombach, Jana Marie Schwarz, Peter N. Robinson, Markus Schuelke, Dominik Seelow
Published: over 8 years ago

Software Mentions 4

bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
bioconductor: MotifDb
An Annotated Collection of Protein-DNA Binding Sequence Motifs
Papers that mentioned: 17
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
cran: klaR
Classification and Visualization
Papers that mentioned: 33