Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: heatmap3
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/heatmap3
An Improved Heatmap Package
6 versions
Latest release: almost 4 years ago
1,168 downloads last month
Papers Mentioning heatmap3 74
10.1093/bioinformatics/btx657
heatmaply: an R package for creating interactive cluster heatmaps for online publishingCited by: 334
Author(s): Tal Galili, Alan O’Callaghan, Jonathan Savage, Carson Sievert
Software Mentions: 14
Published: about 7 years ago
10.4049/immunohorizons.1900097
Mass Cytometry Defines Virus-Specific CD4+ T Cells in Influenza VaccinationCited by: 3
Author(s): Priyanka B. Subrahmanyam, Tyson H. Holmes, Derek Lin, Laura F. Su, Gerlinde Obermoser, Jacques Banchereau, Virginia Pascual, Adolfo Garcı́a-Sastre, Randy A. Albrecht, Karolina Palucka, Mark M. Davis, Holden T. Maecker
Software Mentions: 13
Published: almost 4 years ago
10.1038/s41598-019-41601-7
Characteristics and homogeneity of N6-methylation in human genomesCited by: 13
Author(s): Clare Pacini, Charles R. Bradshaw, Nigel Garrett, Magdalena J. Koziol
Software Mentions: 11
Published: over 5 years ago
10.1371/journal.pgen.1009376
Histone modification dynamics at H3K27 are associated with altered transcription of in planta induced genes in Magnaporthe oryzaeCited by: 46
Author(s): Wei Zhang, Jun Huang, David E. Cook
Software Mentions: 10
Published: almost 4 years ago
10.3390/cancers13102498
Comparative Transcriptomics of Immune Checkpoint Inhibitor Myocarditis Identifies Guanylate Binding Protein 5 and 6 DysregulationCited by: 16
Author(s): Daniel Finke, Markus Heckmann, Janek Salatzki, Johannes Riffel, Esther Herpel, Lucie Heinzerling, Benjamin Meder, Mirko Völkers, Oliver Müller, Norbert Frey, Hugo A. Katus, Florian Leuschner, Ziya Kaya, Lorenz Lehmann
Software Mentions: 9
Published: over 3 years ago
10.1016/j.devcel.2018.07.005
Transcriptional Convergence of Oligodendrocyte Lineage Progenitors during DevelopmentCited by: 184
Author(s): Sueli Marques, David van Bruggen, Darya Vanichkina, Elisa M. Floriddia, Hermany Munguba, Leif Väremo, Stefania Giacomello, Ana Mendanha Falcão, Mandy Meijer, Åsa K. Björklund, Jens Hjerling-Leffler, Ryan J. Taft, Gonçalo Castelo‐Branco
Software Mentions: 8
Published: over 6 years ago
10.1002/1878-0261.12139
Transcription instability in high-risk neuroblastoma is associated with a global perturbation of chromatin domainsCited by: 4
Author(s): Carlo Zanon, Gian Paolo Tonini
Software Mentions: 8
Published: about 7 years ago
10.1111/1751-7915.13634
Soil microbiota influences clubroot disease by modulating <i>Plasmodiophora brassicae</i> and <i>Brassica napus</i> transcriptomesCited by: 19
Author(s): Stéphanie Daval, Kévin Gazengel, Arnaud Belcour, Juliette Linglin, Anne‐Yvonne Guillerm‐Erckelboudt, Alain Sarniguet, Maria Manzanares-Dauleux, Lionel Lebreton, Christophe Mougel
Software Mentions: 7
Published: over 4 years ago
10.18632/aging.101356
A hypothesis-driven approach identifies CDK4 and CDK6 inhibitors as candidate drugs for treatments of adrenocortical carcinomasCited by: 22
Author(s): Djihad Hadjadj, Su-Jung Kim, Thomas Denecker, Laura Ben Driss, Jean‐Charles Cadoret, Chrystelle Maric, Giuseppe Baldacci, Fabien Fauchereau
Software Mentions: 7
Published: almost 7 years ago
10.1186/s12864-019-6349-y
Molecular evolution and expression of opsin genes in Hydra vulgarisCited by: 16
Author(s): Aide Macias-Muñoz, Rabi Murad, A Mortazavi
Software Mentions: 7
Published: almost 5 years ago
10.3390/nu10091254
Changes in Plasma Acylcarnitine and Lysophosphatidylcholine Levels Following a High-Fructose Diet: A Targeted Metabolomics Study in Healthy WomenCited by: 26
Author(s): Anita Gonzalez‐Granda, Antje Damms-Machado, Maryam Basrai, Stephan C. Bischoff
Software Mentions: 7
Published: about 6 years ago
10.3390/nu12113444
Fructose-Induced Intestinal Microbiota Shift Following Two Types of Short-Term High-Fructose Dietary PhasesCited by: 31
Author(s): Julia Beisner, Anita Gonzalez‐Granda, Maryam Basrai, Antje Damms-Machado, Stephan C. Bischoff
Software Mentions: 7
Published: almost 4 years ago
10.1371/journal.pone.0204542
NOJAH: NOt Just Another Heatmap for genome-wide cluster analysisCited by: 9
Author(s): Manali Rupji, Bhakti Dwivedi, Jeanne Kowalski
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0255139
De novo sequencing and analysis of the transcriptome of two highbush blueberry (Vaccinium corymbosum L.) cultivars ‘Bluecrop’ and ‘Legacy’ at harvest and following post-harvest storageCited by: 2
Author(s): María Cárcamo de la Concepción, Daniel J. Sargent, Nada Šurbanovski, Richard Colgan, Marco Moretto
Software Mentions: 6
Published: over 3 years ago
10.1186/s13148-020-00998-z
Identification of DNA methylation signatures associated with poor outcome in lower-risk Stage, Size, Grade and Necrosis (SSIGN) score clear cell renal cell cancerCited by: 8
Author(s): Louis El Khoury, Shuang Fu, Ryan A. Hlady, Ryan T. Wagner, Liguo Wang, Jeanette E. Eckel‐Passow, Erik P. Castle, Melissa L. Stanton, R. Houston Thompson, Alexander S. Parker, Thai H. Ho, Keith D. Robertson
Software Mentions: 6
Published: almost 4 years ago
10.1002/pld3.142
Tomato locule number and fruit size controlled by natural alleles of <i>lc</i> and <i>fas</i>Cited by: 61
Author(s): Yi Hsuan Chu, Jyan Chyun Jang, Zejun Huang, Esther van der Knaap
Software Mentions: 5
Published: over 5 years ago
10.3390/diagnostics10090617
microRNA Expression Profile in Single Hormone Receptor-Positive Breast Cancers Is Mainly Dependent on HER2 Status—A Pilot StudyCited by: 6
Author(s): Michał Kunc, Marta Popęda, Magdalena Niemira, Anna Szałkowska, Michał Bieńkowski, Rafał Pęksa, Aleksandra Łacko, Barbara Radecka, Marcin Braun, Joanna Pikiel, Maria Litwiniuk, Katarzyna Pogoda, Ewa Iżycka‐Świeszewska, Adam Krętowski, Anna Żaczek, Wojciech Biernat, Elżbieta Senkus
Software Mentions: 5
Published: about 4 years ago
10.1093/sleep/zsy186
Identifying and validating blood mRNA biomarkers for acute and chronic insufficient sleep in humans: a machine learning approachCited by: 30
Author(s): Emma Laing, Carla S. Möller-Levet, Derk‐Jan Dijk, Simon N. Archer
Software Mentions: 5
Published: about 6 years ago
10.1186/s40168-019-0651-4
Gut microbiota in HIV–pneumonia patients is related to peripheral CD4 counts, lung microbiota, and in vitro macrophage dysfunctionCited by: 23
Author(s): Meera K. Shenoy, Douglas Fadrosh, David L. Lin, William Worodria, Patrick Byanyima, Emmanuel Musisi, Sylvia Kaswabuli, Josephine Zawedde, Ingvar Sanyu, Emily Chang, Serena Fong, Kathryn McCauley, J. Lucian Davis, Laurence Huang, Susan V. Lynch
Software Mentions: 5
Published: over 5 years ago
10.1098/rsos.200792
Tissue-specific developmental regulation and isoform usage underlie the role of<i>doublesex</i>in sex differentiation and mimicry in<i>Papilio</i>swallowtailsCited by: 13
Author(s): Riddhi Deshmukh, Dhanashree Lakhe, Krushnamegh Kunte
Software Mentions: 5
Published: about 4 years ago
10.1186/s12915-017-0359-5
Low-cell-number, single-tube amplification (STA) of total RNA revealed transcriptome changes from pluripotency to endotheliumCited by: 5
Author(s): Yi‐Hsuan Lee, Ya Wen Hsueh, Yunyan Peng, Kung Chao Chang, Kuen‐Jer Tsai, Han Sun, Ih Jen Su, Po Min Chiang
Software Mentions: 5
Published: over 7 years ago
10.1172/jci.insight.138772
IL-32γ potentiates tumor immunity in melanomaCited by: 19
Author(s): Thomas Gruber, Mirela Kremenovic, Hassan Sadozai, Nives Rombini, Lukas Baeriswyl, Fabienne Maibach, Robert L. Modlin, Michel Gilliet, Diego von Werdt, Robert E. Hunger, S. Morteza Seyed Jafari, Giulia Parisi, Gabriel Abril-Rodríguez, Antoni Ribas, Mirjam Schenk
Software Mentions: 5
Published: about 4 years ago
10.1038/s41438-021-00465-7
Genetic characterization of an almond germplasm collection and volatilome profiling of raw and roasted kernelsCited by: 10
Author(s): Mario Di Guardo, Brian Farneti, Iuliia Khomenko, Giulia Modica, A. Mosca, Gaetano Distefano, Luca Bianco, Michela Troggio, Francesco Sottile, Stefano La Malfa, Franco Biasioli, Alessandra Gentile
Software Mentions: 5
Published: almost 4 years ago
10.3389/fphys.2019.01305
The Regulation of Ruminal Short-Chain Fatty Acids on the Functions of Rumen BarriersCited by: 28
Author(s): Hong Shen, Zhihui Xu, Zanming Shen, Zhongyan Lu
Software Mentions: 5
Published: about 5 years ago
10.3389/fmicb.2019.01204
Influence of Light on Particulate Organic Matter Utilization by Attached and Free-Living Marine BacteriaCited by: 22
Author(s): Laura Gómez‐Consarnau, David M. Needham, Peter K. Weber, Jed A. Fuhrman, Xavier Mayali
Software Mentions: 5
Published: over 5 years ago
10.3390/cancers11010041
Epilepsy Associates with Decreased HIF-1α/STAT5b Signaling in GlioblastomaCited by: 11
Author(s): Sharon Berendsen, Wim G.M. Spliet, Marjolein Geurts, Wim Van Hecke, Tatjana Seute, Tom J. Snijders, Vincent Bours, Erica H. Bell, Arnab Chakravarti, Pierre A. Robe
Software Mentions: 5
Published: almost 6 years ago
10.1007/s11306-017-1259-y
Non-invasive real time monitoring of yeast volatilome by PTR-ToF-MSCited by: 20
Author(s): Iuliia Khomenko, Irene Stefanini, Luca Cappellin, Valentina Cappelletti, Pietro Franceschi, Duccio Cavalieri, T.D. Märk, Franco Biasioli
Software Mentions: 4
Published: about 7 years ago
10.1016/j.celrep.2020.02.021
Interplay of Staphylococcal and Host Proteases Promotes Skin Barrier Disruption in Netherton SyndromeCited by: 49
Author(s): Michael R. Williams, Laura Cau, Yichen Wang, Drishti Kaul, James A. Sanford, Livia S. Zaramela, Shadi Khalil, A. Butcher, Karsten Zengler, Alexander R. Horswill, Christopher L. Dupont, Alain Hovnanian, Richard L. Gallo
Software Mentions: 4
Published: over 4 years ago
10.3389/fmicb.2019.00250
Transcriptomic Analysis of the Brucella melitensis Rev.1 Vaccine Strain in an Acidic Environment: Insights Into Virulence AttenuationCited by: 13
Author(s): Mali Salmon‐Divon, Tamar Zahavi, Jonathan D. Kornspan
Software Mentions: 4
Published: over 5 years ago
10.1155/2014/986048
Advanced Heat Map and Clustering Analysis Using Heatmap3Cited by: 187
Author(s): Shilin Zhao, Yan Guo, Quanhu Sheng, Yu Shyr
Software Mentions: 4
Published: almost 11 years ago
10.1038/s42003-020-0891-7
Chytrid fungi distribution and co-occurrence with diatoms correlate with sea ice melt in the Arctic OceanCited by: 25
Author(s): Estelle Kilias, Leandro Junges, Luka Šupraha, Guy Leonard, Katja Metfies, Thomas A. Richards
Software Mentions: 4
Published: over 4 years ago
10.3389/fimmu.2018.01829
Human Bone Marrow-Resident Natural Killer Cells Have a Unique Transcriptional Profile and Resemble Resident Memory CD8+ T CellsCited by: 28
Author(s): Janine Melsen, Gertjan Lugthart, Carly Vervat, Szymon M. Kiełbasa, Sander A.J. van der Zeeuw, Henk P.J. Buermans, Monique M. van Ostaijen-ten Dam, Arjan C. Lankester, Marco W. Schilham
Software Mentions: 4
Published: about 6 years ago
10.1371/journal.pbio.2005359
Comparative genomics and the nature of placozoan speciesCited by: 63
Author(s): Michael Eitel, Warren R. Francis, Frédérique Varoqueaux, Jean Daraspe, Hans-Jürgen Osigus, Stefan Krebs, Sergio Vargas, Helmut Blum, Gray A. Williams, Bernd Schierwater, Gert Wörheide
Software Mentions: 4
Published: over 6 years ago
10.5414/NP301110
Molecular diagnostic testing of diffuse gliomas in the real-life setting: A practical approachCited by: 8
Author(s): Michał Bieńkowski, Adelheid Wöhrer, Patrizia Moser, Melitta Kitzwögerer, Gerda Ricken, Thomas Ströbel, Johannes A. Hainfellner
Software Mentions: 4
Published: over 6 years ago
10.3390/ijms21082966
Differential Expression and Function of Bicellular Tight Junctions in Skin and Oral Wound HealingCited by: 20
Author(s): Trevor R. Leonardo, Junhe Shi, Dandan Chen, Harsh M. Trivedi, Lin Chen
Software Mentions: 4
Published: over 4 years ago
10.1186/s12864-016-3130-3
Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)Cited by: 15
Author(s): Gladys K. Andino, Michael Gribskov, Denis L. Anderson, Jay D. Evans, Greg J. Hunt
Software Mentions: 4
Published: almost 8 years ago
10.3389/fmicb.2018.01110
The Human Virome Protein Cluster Database (HVPC): A Human Viral Metagenomic Database for Diversity and Function AnnotationCited by: 18
Author(s): Ali H. A. Elbehery, Judith Feichtmayer, Dave Singh, Christian Griebler, Li Deng
Software Mentions: 3
Published: over 6 years ago
10.1186/s12870-020-02384-6
Identification of polycomb repressive complex 1 and 2 core components in hexaploid bread wheatCited by: 13
Author(s): Beáta Strejčková, Radim Čegan, Aleš Pečinka, Zbyněk Milec, Jan Šafář
Software Mentions: 3
Published: about 4 years ago
10.7717/peerj.7488
Factors associated with the composition and diversity of the cervical microbiota of reproductive-age Black South African women: a retrospective cross-sectional studyCited by: 17
Author(s): Harris Onywera, Anna‐Lise Williamson, Zizipho Z. A. Mbulawa, David Coetzee, Tracy L. Meiring
Software Mentions: 3
Published: about 5 years ago
10.1038/s41419-020-03151-z
Age-severity matched cytokine profiling reveals specific signatures in Covid-19 patientsCited by: 82
Author(s): Roberta Angioni, Ricardo Sánchez‐Rodríguez, Fabio Munari, Nicole Bertoldi, Diletta Arcidiacono, Silvia Cavinato, Davide Marturano, Alice Zaramella, Stefano Realdon, Annamaria Cattelan, Antonella Viola, Barbara Molon
Software Mentions: 3
Published: almost 4 years ago
10.1186/s13059-019-1892-z
Whole genome DNA sequencing provides an atlas of somatic mutagenesis in healthy human cells and identifies a tumor-prone cell typeCited by: 39
Author(s): Irene Franco, Hafdís T. Helgadottir, Aldo Moggio, Malin Larsson, Peter Vrtačnik, Ada Johansson, Nina Norgren, Per Lundin, David Mas-Ponte, Jan Nordström, Torbjörn Lundgren, Peter Stenvinkel, Lars Wennberg, Fran Supek, Maria Eriksson
Software Mentions: 3
Published: almost 5 years ago
10.1038/s41598-018-31765-z
Neurotransmitter identity and electrophysiological phenotype are genetically coupled in midbrain dopaminergic neuronsCited by: 21
Author(s): Mónica Tapia, Pierre Yves Baudot, Christine Formisano-Tréziny, Martial A Dufour, Simone Temporal, M. Lasserre, Béatrice Marquèze-Pouey, Jean Gabert, Kazuto Kobayashi, Jean-Marc Goaillard
Software Mentions: 3
Published: about 6 years ago
10.1038/s41598-019-47382-3
Tumor intrinsic immunity related proteins may be novel tumor suppressors in some types of cancerCited by: 16
Author(s): Donghai Xiong, Yian Wang, Ming You
Software Mentions: 3
Published: over 5 years ago
10.3390/cancers12061572
Quantitative Analysis of Differential Expression of HOX Genes in Multiple CancersCited by: 4
Author(s): Orit Adato, Yaron Orenstein, Juri Kopolovic, Tamar Juven‐Gershon, Ron Unger
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0218456
High similarity of IgG antibody profiles in blood and saliva opens opportunities for saliva based serologyCited by: 39
Author(s): Peter Hettegger, Jasmin Huber, Katharina Paßecker, Regina Soldo, Ulrike Kegler, Christa Nöhammer, Andreas Weinhäusel
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0174984
De novo transcriptome analysis of the excretory tubules of Carausius morosus (Phasmatodea) and possible functions of the midgut ‘appendices’Cited by: 9
Author(s): Matan Shelomi
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0226448
Genomic structure and transcript analysis of the Rapid Alkalinization Factor (RALF) gene family during host-pathogen crosstalk in Fragaria vesca and Fragaria x ananassa strawberryCited by: 7
Author(s): Francesca Negrini, Kevin E. O’Grady, Marko Hyvönen, Kevin M. Folta, Elena Baraldi
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pgen.1008043
Somatic LINE-1 retrotransposition in cortical neurons and non-brain tissues of Rett patients and healthy individualsCited by: 43
Author(s): Boxun Zhao, Qixi Wu, Adam Yongxin Ye, Jing Guo, Xianing Zheng, Xiaoxu Yang, Linlin Yan, Qingrong Liu, Thomas M. Hyde, Liping Wei, August Yue Huang
Software Mentions: 2
Published: over 5 years ago
10.1038/s41380-019-0583-1
Long-read sequencing reveals the complex splicing profile of the psychiatric risk gene CACNA1C in human brainCited by: 88
Author(s): Michael B. Clark, Tomasz Wrzesiński, Aintzane B. Garcia, Nicola A. L. Hall, Joel E. Kleinman, Thomas M. Hyde, Weinberger, Paul J. Harrison, Wilfried Haerty, Elizabeth M. Tunbridge
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-017-13887-y
The histone variant H3.3 G34W substitution in giant cell tumor of the bone link chromatin and RNA processingCited by: 40
Author(s): Jinyeong Lim, Joo Hyun Park, Annika Baude, Yeongran Yoo, Yeon Kyu Lee, Christopher R. Schmidt, Jong Bae Park, Jörg Fellenberg, Josef Zustin, Florian Haller, Irene Krücken, Hyun Guy Kang, Christoph Plass, Anders M. Lindroth
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-017-17242-z
The sensitivity and stability of bacterioplankton community structure to wind-wave turbulence in a large, shallow, eutrophic lakeCited by: 3
Author(s): Jian Zhou, Boqiang Qin, Xiaoxia Han, Decai Jin, Zhiping Wang
Software Mentions: 2
Published: almost 7 years ago
10.3390/microorganisms8040558
Harvesting Mango Fruit with a Short Stem-End Altered Endophytic Microbiome and Reduce Stem-End RotCited by: 19
Author(s): Ortal Galsurker, Sonia Diskin, Danielle Duanis-Assaf, Adi Doron‐Faigenboim, Dalia Maurer, Oleg Feygenberg, Noam Alkan
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-019-57228-7
Biodegradability of woody film produced by solvent volatilisation of Japanese Beech solutionCited by: 2
Author(s): Т. В. Волкова, Sui Kanazawa, Norihisa Matsuura, Ryoko Yamamoto-Ikemoto
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-74241-3
A 1H-NMR approach to myocardial energeticsCited by: 3
Author(s): Jackie A. Heitzman, Tyler C. Dobratz, Kaleb D. Fischer, De Wayne Townsend
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-77271-z
Bacterial composition of nasal discharge in children based on highly accurate 16S rRNA gene sequencing analysisCited by: 9
Author(s): Kaoru Haro, Midori Ogawa, Mitsumasa Saito, Koichi Kusuhara, Kazumasa Fukuda
Software Mentions: 2
Published: almost 4 years ago
10.1016/j.ccell.2017.10.004
A Paradoxical Tumor-Suppressor Role for the Rac1 Exchange Factor Vav1 in T Cell Acute Lymphoblastic LeukemiaCited by: 35
Author(s): Javier Robles‐Valero, L. Francisco Lorenzo‐Martín, Mauricio Menacho-Márquez, Isabel Fernández‐Pisonero, Antonio Abad, Mireia Camós, Marı́a L. Toribio, Lluís Espinosa, Anna Bigas, Xosé R. Bustelo
Software Mentions: 2
Published: about 7 years ago
10.1128/mSystems.00081-21
MicroRNA-Mediated Regulation of Initial Host Responses in a Symbiotic OrganCited by: 2
Author(s): Silvia Moriano‐Gutierrez, Edward G. Ruby, Margaret J. McFall‐Ngai
Software Mentions: 2
Published: over 3 years ago
10.1038/s41388-018-0433-7
Vav proteins maintain epithelial traits in breast cancer cells using miR-200c-dependent and independent mechanismsCited by: 12
Author(s): L. Francisco Lorenzo‐Martín, Carmen Citterio, Mauricio Menacho‐Marquez, Javier Conde, Romain M. Larive, Sonia Rodríguez-Fdez, Ramón Garcı́a-Escudero, Javier Robles‐Valero, Myriam Cuadrado, Isabel Fernández‐Pisonero, Mercedes Dosil, María A. Sevilla, María J. Montero, Pedro M. Fernández-Salguero, Jesús M. Paramio, Xosé R. Bustelo
Software Mentions: 2
Published: about 6 years ago
10.15252/emmm.201708289
Anti‐tumor efficacy of a novel CLK inhibitor via targeting RNA splicing and MYC‐dependent vulnerabilityCited by: 63
Author(s): Kenichi Iwai, Masahiro Yaguchi, Kazuho Nishimura, Yoshiyuki Yamamoto, Toshiya Tamura, Daisuke Nakata, Ryo Dairiki, Yoichi Kawakita, Ryo Mizojiri, Yoshikatsu Ito, Masaharu Asano, Hironobu Maezaki, Yusuke Nakayama, Misato Kaishima, Kôzô Hayashi, Mika Teratani, Shuichi Miyakawa, Misa Iwatani, Maki Miyamoto, Michael G. Klein, Wes Lane, G. Snell, Richard Tjhen, Xingyue He, Sai Murali Krishna Pulukuri, Toshiyuki Nomura
Software Mentions: 2
Published: over 6 years ago
10.3389/fimmu.2019.00099
CD11c+ Cells Are Gatekeepers for Lymphocyte Trafficking to Infiltrated Islets During Type 1 DiabetesCited by: 21
Author(s): Adam Sandor, Robin S. Lindsay, Nathan Dyjack, Jennifer C Whitesell, Cydney Rios, Brenda J. Bradley, Kathryn Haskins, David Serreze, Aron M. Geurts, Yi-Guang Chen, Max A. Seibold, Jordan Jacobelli, Rachel S. Friedman
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0222717
Adverse prognosis of glioblastoma contacting the subventricular zone: Biological correlatesCited by: 27
Author(s): Sharon Berendsen, Emma J. van Bodegraven, Tatjana Seute, Wim G.M. Spliet, Marjolein Geurts, Jeroen Hendrikse, Laurent Schoysman, Willemijn B Huiszoon, Meri R. J. Varkila, Soufyan Rouss, Erica H. Bell, Jérôme Kroonen, Arnab Chakravarti, Vincent Bours, Tom J. Snijders, Pierre A. Robe
Software Mentions: 2
Published: about 5 years ago
10.3389/fmicb.2015.01377
Genetic Resistance Determinants, In Vitro Time-Kill Curve Analysis and Pharmacodynamic Functions for the Novel Topoisomerase II Inhibitor ETX0914 (AZD0914) in Neisseria gonorrhoeaeCited by: 40
Author(s): Sunniva Foerster, Daniel Golparian, Susanne Jacobsson, Lucy J. Hathaway, Nicola Low, William M. Shafer, Christian L. Althaus, Magnus Unemo
Software Mentions: 1
Published: almost 9 years ago
10.1155/2015/187803
Advances in Computational GenomicsCited by: 0
Author(s): Leng Han, Yan Guo, Zhixi Su, Siyuan Zheng, Zhi-xiang Lu
Software Mentions: 1
Published: almost 10 years ago
10.1186/s13059-015-0847-2
Transcriptome analysis in calorie-restricted rats implicates epigenetic and post-translational mechanisms in neuroprotection and agingCited by: 47
Author(s): Shona H. Wood, Sipko van Dam, Thomas Craig, Robi Tăcutu, Amy O’Toole, B.J. Merry, João Pedro de Magalhães
Software Mentions: 1
Published: almost 9 years ago
10.1186/s13048-019-0529-x
Mitochondrial dysfunction and endoplasmic reticulum stress involved in oocyte aging: an analysis using single-cell RNA-sequencing of mouse oocytesCited by: 35
Author(s): Tao Zhang, Qingsong Xi, Dan Wang, Jingjing Li, Meng Wang, Dan Li, Lixia Zhu, Lei Jin
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0182636
Host plant driven transcriptome plasticity in the salivary glands of the cabbage looper (Trichoplusia ni)Cited by: 22
Author(s): Loren J. Rivera-Vega, David A. Galbraith, Christina M. Grozinger, Gary W. Felton
Software Mentions: 1
Published: about 7 years ago
10.1016/j.ijppaw.2019.07.009
Intraspecific genetic variation in Trichinella spiralis and Trichinella britovi populations circulating in different geographical regions of PolandCited by: 8
Author(s): Ewa Bilska–Zając, Frits Franssen, Mirosław Różycki, Arno Swart, Jacek Karamon, Jacek Sroka, Jolanta Zdybel, Anna Ziętek-Barszcz, Tomasz Cencek
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pbio.3000934
The noncoding small RNA SsrA is released by Vibrio fischeri and modulates critical host responsesCited by: 31
Author(s): Silvia Moriano‐Gutierrez, Clotilde Bongrand, Tara Essock‐Burns, Leo Wu, Margaret J. McFall‐Ngai, Edward G. Ruby
Software Mentions: 1
Published: about 4 years ago
10.1002/ece3.6392
Soil microbial communities associated with giant sequoia: How does the world's largest tree affect some of the world's smallest organisms?Cited by: 4
Author(s): Chelsea J. Carey, Sydney I. Glassman, Thomas D. Bruns, Emma L. Aronson, Stephen C. Hart
Software Mentions: 1
Published: over 4 years ago
10.3390/ijms18081620
Melatonin Decreases Glucose Metabolism in Prostate Cancer Cells: A 13C Stable Isotope-Resolved Metabolomic StudyCited by: 37
Author(s): David Hevia, Pedro González-Menéndez, Mario Fernández‐Fernández, Sergio Cueto, Pablo Rodríguez-González, J. Ignacio García Alonso, Juan C. Mayo, Rosa M. Sainz
Software Mentions: 1
Published: over 7 years ago
10.1128/mBio.00599-17
Modulation of Aneuploidy in <i>Leishmania donovani</i> during Adaptation to Different <i>In Vitro</i> and <i>In Vivo</i> Environments and Its Impact on Gene ExpressionCited by: 140
Author(s): Franck Dumetz, Hideo Imamura, Mandy Sanders, Veronika Šeblová, Jitka Myšková, Pascale Pescher, Manu Vanaerschot, Conor J. Meehan, Bart Cuypers, Géraldine De Muylder, Gérald F. Späth, Giovanni Bussotti, Joris Robert Vermeesch, Matthew Berriman, James A. Cotton, Petr Volf, Jean‐Claude Dujardin, Malgorzata A. Domagalska
Software Mentions: 1
Published: over 7 years ago
10.1186/s12885-018-4077-3
In vitro and in silico validation of CA3 and FHL1 downregulation in oral cancerCited by: 6
Author(s): Cláudia Maria Pereira, Ana Carolina de Carvalho, Felipe Rodrigues da Silva, Matias Eliseo Melendez, Roberta Cardim Lessa, Valéria C.C. Andrade, Luiz Paulo Kowalski, André Luiz Vettore, André Lopes Carvalho
Software Mentions: 1
Published: over 6 years ago
10.1128/mSystems.00345-18
Genomic Characterization and Virulence Potential of Two <i>Fusarium oxysporum</i> Isolates Cultured from the International Space StationCited by: 23
Author(s): Camilla Urbaniak, Peter van Dam, Alexander Zaborin, Olga Zaborina, Jack A. Gilbert, Tamás Török, Clay C. C. Wang, Kasthuri Venkateswaran
Software Mentions: 1
Published: over 5 years ago
10.1186/1471-2105-15-S10-P16
Heatmap3: an improved heatmap package with more powerful and convenient featuresCited by: 108
Author(s): Shilin Zhao, Yan Guo, Quanhu Sheng, Yu Shyr
Software Mentions: 1
Published: about 10 years ago