Papers: 10.1038/s41598-019-41601-7

https://doi.org/10.1038/s41598-019-41601-7

Characteristics and homogeneity of N6-methylation in human genomes

Cited by: 13
Author(s): Clare Pacini, Charles R. Bradshaw, Nigel Garrett, Magdalena J. Koziol
Published: over 7 years ago

Software Mentions 11

bioconductor: ChIPseeker
ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
Papers that mentioned: 161
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
Very Likely Science (90)
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
Very Likely Science (90)
bioconductor: qusage
qusage: Quantitative Set Analysis for Gene Expression
Papers that mentioned: 4
Very Likely Science (100)
bioconductor: regioneR
Association analysis of genomic regions based on permutation tests
Papers that mentioned: 30
Very Likely Science (100)
bioconductor: Rsubread
Mapping, quantification and variant analysis of sequencing data
Papers that mentioned: 331
Very Likely Science (100)
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browser
Papers that mentioned: 107
Very Likely Science (90)
bioconductor: VariantAnnotation
Annotation of Genetic Variants
Papers that mentioned: 47
Very Likely Science (100)
cran: heatmap3
An Improved Heatmap Package
Papers that mentioned: 74
Very Likely Science (83)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)