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Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: almost 3 years ago
4,921 dependent packages
2,865,232 downloads last month

Enhanced Analysis
Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu
Repository Activity:
Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses
  • +520 Educational commit emails
    26 contributors with educational email addresses
  • +18 Science terms in README
    9 scientific terms found in README
Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.1001/jamanetworkopen.2020.0512
Assessment of Electronic Health Record Search Patterns and Practices by Practitioners in a Large Integrated Health Care System
Cited by: 17
Author(s): Halley Ruppel, Aashish Bhardwaj, R. Manickam, Julia Adler‐Milstein, Marc Flagg, Manuel A. Ballesca, Jean‐Louis Vincent
Software Mentions: 2
Published: over 6 years ago
10.1111/ijfs.14769
Correlation of cooking time with water absorption and changes in relative density during boiling of cassava roots
Cited by: 9
Author(s): Thierry Tran, Xiaofei Zhang, Hernán Ceballos, Jhon L. Moreno, Jorge Luna, Andrés Escobar, Nelsón Morante, John Belalcázar, Luis Augusto Becerra, Dominique Dufour
Software Mentions: 2
Published: almost 6 years ago
10.1186/s13287-019-1270-5
The long non-coding RNA Snhg3 is essential for mouse embryonic stem cell self-renewal and pluripotency
Cited by: 16
Author(s): Weisi Lu, Jianping Yu, Fang Shi, Jianing Zhang, Rui Huang, Shanshan Yin, Zhou Songyang, Junjiu Huang
Software Mentions: 2
Published: about 7 years ago
10.3389/fpls.2018.01566
Mechanical Effects of Cellulose, Xyloglucan, and Pectins on Stomatal Guard Cells of Arabidopsis thaliana
Cited by: 20
Author(s): Hojae Yi, Yue Rui, Baris Kandemir, James Wang, Charles T. Anderson, Virendra M. Puri
Software Mentions: 2
Published: almost 8 years ago
10.1007/s11605-020-04879-x
Survival Benefit of Adjuvant Chemotherapy After Pancreatoduodenectomy for Ampullary Adenocarcinoma: a Propensity-Matched National Cancer Database (NCDB) Analysis
Cited by: 7
Author(s): Sivesh K. Kamarajah, Filip Bednar, Clifford S. Cho, Hari Nathan
Software Mentions: 2
Published: over 5 years ago
10.1002/etc.4844
Simulating Honey Bee Large‐Scale Colony Feeding Studies Using the BEEHAVE Model—Part II: Analysis of Overwintering Outcomes
Cited by: 8
Author(s): Farah Abi‐Akar, Amélie Schmolke, Colleen Roy, Nika Galić, Silvia Hinarejos
Software Mentions: 2
Published: almost 6 years ago
10.1007/s00787-019-01432-3
Toddlers’ diurnal cortisol levels affected by out-of-home, center-based childcare and at-home, guardian-supervised childcare: comparison between different caregiving contexts
Cited by: 10
Author(s): Katja Tervahartiala, Linnéa Karlsson, Juho Pelto, Susanna Kortesluoma, Sirpa Hyttinen, Annarilla Ahtola, Niina Junttila, Hasse Karlsson
Software Mentions: 2
Published: almost 7 years ago
10.1186/s12934-020-01417-x
TAK-242 ameliorates DSS-induced colitis by regulating the gut microbiota and the JAK2/STAT3 signaling pathway
Cited by: 34
Author(s): Jiajia Wang, Guannan Zhu, Cheng Sun, Ke Xiong, Tingting Yao, Yuan Su, Fang Hou
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0202270
The microbiota of hematophagous ectoparasites collected from migratory birds
Cited by: 18
Author(s): Francesco Cerutti, Paola Modesto, F. Rizzo, Alessandra Cravero, Irena Jurman, Stefano Costa, Mauro Giammarino, Maria Lucia Mandola, Maria Goria, Slobodanka Radović, Federica Cattonaro, Pier Luigi Acutis, Simone Peletto
Software Mentions: 2
Published: almost 8 years ago
10.1093/ehjci/jex218
Doppler assessment of aortic stenosis: a 25-operator study demonstrating why reading the peak velocity is superior to velocity time integral
Cited by: 16
Author(s): Stefano Sacchi, Niti M. Dhutia, Matthew Shun-Shin, Massoud Zolgharni, Nilesh Sutaria, DP Francis, Graham Cole
Software Mentions: 2
Published: over 8 years ago
10.1208/s12248-019-0319-9
A Novel Method for Analysing Frequent Observations from Questionnaires in Order to Model Patient-Reported Outcomes: Application to EXACT® Daily Diary Data from COPD Patients
Cited by: 2
Author(s): Eva Germovsek, Claire Ambery, Shuying Yang, Misba Beerahee, Mats O. Karlsson, Elodie L. Plan
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0244468
Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals
Cited by: 17
Author(s): Harshavardhan Doddapaneni, Sara Javornik Cregeen, Richard Sucgang, Qingchang Meng, Xiang Qin, Vasanthi Avadhanula, Hsu Chao, Vipin Menon, Erin Nicholson, David Henke, Felipe-Andrés Piedra, Anubama Rajan, Zeineen Momin, Kavya Kottapalli, Kristi L. Hoffman, Fritz J. Sedlazeck, Ginger Metcalf, Pedro A. Piedra, Donna M. Muzny, Joseph F. Petrosino, Richard A. Gibbs
Software Mentions: 2
Published: almost 5 years ago
10.1007/s11356-020-09621-3
Distance to landfill and human activities affects the debris incorporation into the white stork nests in urbanized landscape in central Spain
Cited by: 13
Author(s): Zuzanna Jagiełło, Alejandro López‐García, José I. Aguirre, Łukasz Dylewski
Software Mentions: 2
Published: about 6 years ago
10.1186/s12934-017-0793-7
Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence
Cited by: 33
Author(s): Johannes Lambrecht, Nicolas Cichocki, Thomas Hübschmann, Christin Koch, Hauke Harms, Susann Müller
Software Mentions: 2
Published: almost 9 years ago
10.1186/s12934-021-01513-6
Long-term efficacy and safety of monotherapy with a single fresh fecal microbiota transplant for recurrent active ulcerative colitis: a prospective randomized pilot study
Cited by: 26
Author(s): Fang Hou, Fang Lian, Xuejun Li, Chong‐Dao Lu, Yuan Su, Ke Xiong, Lijiu Zhang
Software Mentions: 2
Published: over 5 years ago
10.1007/s11356-021-13885-8
Characterization of microbial response to petroleum hydrocarbon contamination in a lacustrine ecosystem
Cited by: 6
Author(s): Emilio D’Ugo, Marco Bruno, Arghya Mukherjee, Dhrubajyoti Chattopadhyay, Roberto Giuseppetti, Rita De Pace, Fabio Magurano
Software Mentions: 2
Published: over 5 years ago
10.1007/s11356-021-14508-y
Assessment of anthropogenic pollution by monitoring occurrence and distribution of chemicals in the river Liffey in Dublin
Cited by: 2
Author(s): Rosa Peñalver, Matthew Jacobs, Susan Hegarty, Fiona Regan
Software Mentions: 2
Published: about 5 years ago
10.1186/s13287-020-1580-7
Exosomal microRNA-144 from bone marrow-derived mesenchymal stem cells inhibits the progression of non-small cell lung cancer by targeting CCNE1 and CCNE2
Cited by: 41
Author(s): Yuan Liu, Dalin Zhang, Linlin Li, Xin Tian, Yuwei Zhao, Rui Ma, Jie Du
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2017.01871
Phloroglucinol Degradation in the Rumen Promotes the Capture of Excess Hydrogen Generated from Methanogenesis Inhibition
Cited by: 32
Author(s): Gonzalo Martínez Fernández, Stuart E. Denman, Jane Cheung, Christopher S. McSweeney
Software Mentions: 2
Published: almost 9 years ago
10.1002/eji.202048841
Monocytes promote UV‐induced epidermal carcinogenesis
Cited by: 5
Author(s): Iva Lelios, Sebastian A. Stifter, Virginia Cecconi, Ekaterina Petrova, Mirjam Lutz, Dilay Cansever, Sebastian G. Utz, Burkhard Becher, Maries van den Broek, Melanie Greter
Software Mentions: 2
Published: over 5 years ago
10.1186/s40001-021-00535-5
Inherited unbalanced reciprocal translocation with 3q duplication and 5p deletion in a foetus revealed by cell-free foetal DNA (cffDNA) testing: a case report
Cited by: 0
Author(s): Taccyanna Mikulski Ali, Emilia Mateu‐Brull, Nuria Balaguer, Camila Gomes Dantas, Haline Risso Borges, Mariana Quintans Guerra de Oliveira, Lorena Rodrigo, Inmaculada Campos‐Galindo, Roser Navarro, Miguel Milán
Software Mentions: 2
Published: about 5 years ago
10.1186/s40001-021-00481-2
LncRNA NEAT1 promotes nucleus pulposus cell matrix degradation through regulating Nrf2/ARE axis
Cited by: 7
Author(s): Li Cheng, Xiaobo Ma, Chenfei Ni, Jingyan Xu, Y J Xie, Junwei Kan, Xiaoli Wei
Software Mentions: 2
Published: over 5 years ago
10.1111/ejn.15199
White matter microstructure of the neural emotion regulation circuitry in mild traumatic brain injury
Cited by: 3
Author(s): Harm Jan van der Horn, Namrata R. Mangina, Sandra E. Rakers, J G M Kok, Marieke E. Timmerman, Alexander Leemans, Jacoba M. Spikman, Joukje van der Naalt
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0189999
HIV-1 envelope sequence-based diversity measures for identifying recent infections
Cited by: 8
Author(s): Alexis Kafando, Éric Fournier, Bouchra Serhir, Christine Martineau, Florence Doualla-Bell, Mohamed N'dongo Sangaré, Mohamed Sylla, Annie Chamberland, Mohamed El-Far, Hugues Charest, Cécile Tremblay
Software Mentions: 2
Published: over 8 years ago
10.15698/mic2020.04.713
Stable and destabilized GFP reporters to monitor calcineurin activity in Saccharomyces cerevisiae
Cited by: 7
Author(s): Jutta Diessl, Arpita Nandy, Christina Schug, Lukas Habernig, Sabrina Büttner
Software Mentions: 2
Published: over 6 years ago
10.1111/1751-7915.12853
Nutrient and acetate amendment leads to acetoclastic methane production and microbial community change in a non-producing Australian coal well
Cited by: 26
Author(s): Michiel H. in ‘t Zandt, Sabrina Beckmann, Ruud Rijkers, Mike S. M. Jetten, Mike Manefield, Cornelia U. Welte
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0215508
In silico analysis of the V66M variant of human BDNF in psychiatric disorders: An approach to precision medicine
Cited by: 20
Author(s): Clara Carolina Silva De Oliveira, Gabriel Rodrigues Coutinho Pereira, Jamile Yvis Santos De Alcantara, Deborah Antunes, Ernesto R. Caffarena, Joelma Freire De Mesquita
Software Mentions: 2
Published: over 7 years ago
10.1186/s13287-020-01641-7
Chemical-defined medium supporting the expansion of human mesenchymal stem cells
Cited by: 12
Author(s): Jianyong Xu, Wei Lian, Jieting Chen, Wenlei Li, Lingyun Li, Zhong Huang
Software Mentions: 2
Published: over 6 years ago
10.1007/s00394-019-02122-1
Lower carbohydrate and higher fat intakes are associated with higher hemoglobin A1c: findings from the UK National Diet and Nutrition Survey 2008–2016
Cited by: 15
Author(s): Chaitong Churuangsuk, Michael E. J. Lean, Emilie Combet
Software Mentions: 2
Published: almost 7 years ago
10.7717/peerj.5507
Assessment of genomic changes in a CRISPR/Cas9 <i>Phaeodactylum tricornutum</i> mutant through whole genome resequencing
Cited by: 17
Author(s): Monia Teresa Russo, Riccardo Aiese Cigliano, Walter Sanseverino, Maria Immacolata Ferrante
Software Mentions: 2
Published: almost 8 years ago
10.7717/peerj.9988
Analysis of the infant gut microbiome reveals metabolic functional roles associated with healthy infants and infants with atopic dermatitis using metaproteomics
Cited by: 10
Author(s): Amornthep Kingkaw, Massalin Nakphaichit, Narissara Suratannon, Sunee Nitisinprasert, Chantha Wongoutong, Pantipa Chatchatee, Sucheewin Krobthong, Sawanya Charoenlappanit, Sittiruk Roytrakul, Wanwipa Vongsangnak
Software Mentions: 2
Published: almost 6 years ago
10.1007/s10680-017-9458-9
The Length of Working Life in Spain: Levels, Recent Trends, and the Impact of the Financial Crisis
Cited by: 22
Author(s): Christian Dudel, María Andrée López Gómez, Fernando G. Benavides, Mikko Myrskylä
Software Mentions: 2
Published: over 8 years ago
10.1111/1462-2920.14896
Ecogenomics of the SAR11 clade
Cited by: 55
Author(s): Jose M. Haro‐Moreno, Francisco Rodrı́guez-Valera, Riccardo Rosselli, Francisco Martínez-Hernández, Juan J. Roda‐Garcia, Mónica Lluesma Gómez, Òscar Fornas, Manuel Martínez‐García, Mario López‐Pérez
Software Mentions: 2
Published: over 6 years ago
10.1111/1462-2920.15269
Unravelling lactate‐acetate and sugar conversion into butyrate by intestinal <i>Anaerobutyricum</i> and <i>Anaerostipes</i> species by comparative proteogenomics
Cited by: 34
Author(s): Sudarshan A. Shetty, Sjef Boeren, Thi Phuong Nam Bui, Hauke Smidt, Willem M. de Vos
Software Mentions: 2
Published: almost 6 years ago
10.1002/jbm4.10372
Potential Biomarkers of the Turnover, Mineralization, and Volume Classification: Results Using <scp>NMR</scp> Metabolomics in Hemodialysis Patients
Cited by: 2
Author(s): Aline Lourenço Baptista, Kallyandra Padilha, Pamella Araujo Malagrino, Gabriela Venturini, Ana Cm Zeri, Luciene M. dos Reis, Janaina S. Martins, Vanda Jorgetti, Alexandre C. Pereira, Silvia Maria de Oliveira Titan, Rosa M.A. Moysés
Software Mentions: 2
Published: about 6 years ago
10.1186/s12940-015-0082-z
Building-related health impacts in European and Chinese cities: a scalable assessment method
Cited by: 7
Author(s): Jouni T. Tuomisto, Marjo Niittynen, Erkki Pärjälä, Arja Asikainen, Laura Pérez, Stephan Trüeb, Matti Jantunen, Nino Künzli, Clive E. Sabel
Software Mentions: 2
Published: over 10 years ago
10.1016/j.mex.2019.02.016
Determine the prevalence of gestational diabetes in Ardakan and its related factors
Cited by: 0
Author(s): Ahmad Moradi, Hamid Reza Morovati, Amir Teimourpour, Shahrzad Nematollahi, Monireh Faghir Ganji
Software Mentions: 2
Published: over 7 years ago
10.3389/fmicb.2020.585836
Adaptation to Aquatic and Terrestrial Environments in Chlorella vulgaris (Chlorophyta)
Cited by: 11
Author(s): Siegfried Aigner, Karin Glaser, Erwann Arc, Andreas Holzinger, Michael Schletter, Ulf Karsten, Ilse Kranner
Software Mentions: 2
Published: almost 6 years ago
10.1172/jci.insight.121144
The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules
Cited by: 15
Author(s): G.F. De Nicola, Rekha Bassi, C. Blake Nichols, Mariana Fernández-Caggiano, Pelin Golforoush, Dibesh Thapa, Rosaleen J. Anderson, Eva Denise Martin, Sharwari Verma, Jens Kleinjung, Adam Laing, Jonathan P. Hutchinson, Philip Eaton, James E. Clark, Michael Marber
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0179143
Transcriptional mechanisms associated with seed dormancy and dormancy loss in the gibberellin-insensitive sly1-2 mutant of Arabidopsis thaliana
Cited by: 13
Author(s): Sven K. Nelson, Camille M. Steber
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0132999
A Comprehensive Protocol for Improving the Description of Saprolegniales (Oomycota): Two Practical Examples (Saprolegnia aenigmatica sp. nov. and Saprolegnia racemosa sp. nov.)
Cited by: 26
Author(s): José Vladimir Sandoval-Sierra, Javier Diéguez-Uribeondo
Software Mentions: 2
Published: about 11 years ago
10.18632/aging.103560
Circular RNA hsa_circ_0076690 acts as a prognostic biomarker in osteoporosis and regulates osteogenic differentiation of hBMSCs via sponging miR-152
Cited by: 17
Author(s): Shujuan Han, Ming-jie Kuang, Chao Sun, Haifeng Wang, Dachuan Wang, Qian Liu
Software Mentions: 2
Published: about 6 years ago
10.1155/2020/9818349
Orlistat-Induced Gut Microbiota Modification in Obese Mice
Cited by: 22
Author(s): Jing Ke, Yingli An, Bin Cao, Jianan Lang, Nannan Wu, Dong Zhao
Software Mentions: 2
Published: over 6 years ago
10.1530/ERC-17-0442
The microbiome in PTEN hamartoma tumor syndrome
Cited by: 5
Author(s): Victoria Byrd, Ted M. Getz, Roshan Padmanabhan, Hans Arora, Charis Eng
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0164395
Seasonal Vitamin D Status in Polish Elite Athletes in Relation to Sun Exposure and Oral Supplementation
Cited by: 56
Author(s): Jarosław Krzywański, Tomasz Mikulski, Hubert Krysztofiak, Marcel Młyńczak, Ewa Gaczynska, Andrzej Ziemba
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0217628
Macroscale abundance patterns of hydromedusae in the temperate Southwestern Atlantic (27°–56° S)
Cited by: 10
Author(s): M. Sofía Dutto, Carlo Javier Chazarreta, Claudia Rodríguez, Agustín Schiariti, Luciana Mabel Díaz Briz, Gabriel N. Genzano
Software Mentions: 2
Published: about 7 years ago
10.3389/fcell.2020.590898
T-Box Transcription Factor 22 Is an Immune Microenvironment-Related Biomarker Associated With the BRAFV600E Mutation in Papillary Thyroid Carcinoma
Cited by: 3
Author(s): Xubin Dong, Jingjing Song, Jing Hu, Cheng Zheng, Xiaohua Zhang, Haiguang Liu
Software Mentions: 2
Published: over 5 years ago
10.3390/ijns5020018
Newborn Screening for Selected Disorders in Nepal: A Pilot Study
Cited by: 5
Author(s): Arti Pandey, Suchita Joshi, Rateena Rajbhandari, Prerana Kansakar, Sadichhya Dhakal, Ralph Fingerhut
Software Mentions: 2
Published: over 7 years ago
10.3390/ani11040992
Benefits of Silvopastoral Systems for Keeping Beef Cattle
Cited by: 9
Author(s): Stella Huertas, Pablo Ernesto Bobadilla, Ignacio Alcántara, Emilie Akkermans, F.J.C.M. van Eerdenburg
Software Mentions: 2
Published: over 5 years ago
10.1007/s11306-018-1328-x
Weight loss moderately affects the mixed meal challenge response of the plasma metabolome and transcriptome of peripheral blood mononuclear cells in abdominally obese subjects
Cited by: 18
Author(s): Parastoo Fazelzadeh, Roland W. J. Hangelbroek, Peter J. Joris, Casper G. Schalkwijk, Diederik Esser, Lydia A. Afman, Thomas Hankemeier, Doris M. Jacobs, Velitchka V. Mihaleva, Sander Kersten, John van Duynhoven, Mark V. Boekschoten
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0109343
The Growing Price Gap between More and Less Healthy Foods: Analysis of a Novel Longitudinal UK Dataset
Cited by: 153
Author(s): Nicholas Jones, Annalijn Conklin, Marc Suhrcke, Pablo Monsivais
Software Mentions: 2
Published: almost 12 years ago
10.1186/s13287-021-02244-6
Exosomes from human umbilical cord mesenchymal stem cells attenuate the inflammation of severe steroid-resistant asthma by reshaping macrophage polarization
Cited by: 36
Author(s): Bing Dong, Chao Wang, Jing Zhang, Jinrong Zhang, Yinuo Gu, Xiaoping Guo, Xu Zuo, Pan He, Alan Hsu, Guoqiang Wang, Fang Wang
Software Mentions: 2
Published: over 5 years ago
10.3389/fmicb.2019.01821
Community Composition and Diversity of Intestinal Microbiota in Captive and Reintroduced Przewalski’s Horse (Equus ferus przewalskii)
Cited by: 22
Author(s): Yimeng Li, Ke Zhang, Yang Liu, Kai Li, Defu Hu, Torsten Wronski
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0200336
Effects of lobeglitazone on insulin resistance and hepatic steatosis in high-fat diet-fed mice
Cited by: 8
Author(s): Bong-Hoi Choi, Zhixin Jin, Chin-ok Yi, Juhong Oh, Eun Ae Jeong, Jong Youl Lee, Kyung Ah Park, Kyung Eun Kim, Jung Eun Lee, Hyun‐Jin Kim, Jong Ryeal Hahm, Gu Seob Roh
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.ppat.1009112
Bacterial persisters in long-term infection: Emergence and fitness in a complex host environment
Cited by: 49
Author(s): Jennifer A. Bartell, David R. Cameron, Biljana Mojsoska, Janus Anders Juul Haagensen, Tacjana Pressler, Lea Mette Madsen Sommer, Kim Lewis, Søren Molin, Helle Krogh Johansen
Software Mentions: 2
Published: over 5 years ago
10.1007/s00125-021-05558-5
Sitting less elicits metabolic responses similar to exercise and enhances insulin sensitivity in postmenopausal women
Cited by: 8
Author(s): Carlijn M. E. Remie, Georges E. Janssens, Lena Bilet, Michel van Weeghel, Bernard M. F. M. Duvivier, Vera H. W. de Wit, Niels J. Connell, Johanna A. Jörgensen, Bauke V. Schomakers, Vera B. Schrauwen‐Hinderling, Joris Hoeks, Matthijs K. C. Hesselink, Esther Phielix, Riekelt H. Houtkooper, Patrick Schrauwen
Software Mentions: 2
Published: almost 5 years ago
10.18632/aging.202914
Expression profile, molecular functions, and prognostic significance of miRNAs in primary colorectal cancer stem cells
Cited by: 3
Author(s): Cheng Fan, Ran Lu, Chao Fang, Xueli Zhang, Zhaoying Lv, Yuan Li, Hong Zhang, Zong‐Guang Zhou, Xianming Mo, Xiao‐Feng Sun
Software Mentions: 2
Published: over 5 years ago
10.3390/pathogens10091117
Screening of Dietary Ingredients against the Honey Bee Parasite Nosema ceranae
Cited by: 13
Author(s): Chiara Braglia, Daniele Alberoni, Martín Pablo Porrini, Melisa Paula Garrido, Loredana Baffoni, Diana Di Gioia
Software Mentions: 2
Published: almost 5 years ago
10.1007/s00125-020-05376-1
Oral insulin immunotherapy in children at risk for type 1 diabetes in a randomised controlled trial
Cited by: 28
Author(s): Robin Assfalg, Jan Knoop, Kristi L. Hoffman, Markus Pfirrmann, Jose Zapardiel‐Gonzalo, Anna Hofelich, Anne Eugster, Marc Weigelt, Claudia Matzke, Julia Reinhardt, Yannick F. Fuchs, Melanie Bunk, Andreas Weiß, Markus Hippich, Kathrin Halfter, Stefanie M. Hauck, Jörg Hasford, Joseph F. Petrosino, Peter Achenbach, Ezio Bonifacio, Anette‐Gabriele Ziegler
Software Mentions: 2
Published: over 5 years ago
10.3390/pathogens10091183
Nanopore-Based Surveillance of Zoonotic Bacterial Pathogens in Farm-Dwelling Peridomestic Rodents
Cited by: 7
Author(s): Nusrat Jahan, Laramie L. Lindsey, Evan J. Kipp, Adam Reinschmidt, Brad Heins, Amy M. Runck, Peter A. Larsen
Software Mentions: 2
Published: almost 5 years ago
10.3390/metabo11080472
Metagenomic, Metabolomic, and Functional Evaluation of Kimchi Broth Treated with Light-Emitting Diodes (LEDs)
Cited by: 2
Author(s): Yeong Ji Oh, Ye-Rin Park, Jungil Hong, Do-Yup Lee
Software Mentions: 2
Published: about 5 years ago
10.1242/dev.199430
Single-cell morphometrics reveals ancestral principles of notochord development
Cited by: 19
Author(s): Toby G. R. Andrews, Wolfram Pönisch, Ewa K. Paluch, Benjamin Steventon, Èlia Benito‐Gutiérrez
Software Mentions: 2
Published: about 5 years ago
10.1242/dev.166025
Geometrical confinement controls the asymmetric patterning of Brachyury in cultures of pluripotent cells
Cited by: 39
Author(s): Guillaume Blin, Darren Wisniewski, Catherine Picart, Manuel Théry, Michel Pucéat, Sally Lowell
Software Mentions: 2
Published: over 8 years ago
10.1242/dev.189449
Establishment of a relationship between blastomere geometry and YAP localisation during compaction
Cited by: 12
Author(s): Christophe Royer, Karolis Leonavicius, Annemarie Kip, Deborah Fortin, Kirtirupa Nandi, Anna Vincent, Céline Jones, Tim Child, Kevin Coward, Chris Graham, Shankar Srinivas
Software Mentions: 2
Published: over 6 years ago
10.3390/metabo10120495
Single-Step Extraction Coupled with Targeted HILIC-MS/MS Approach for Comprehensive Analysis of Human Plasma Lipidome and Polar Metabolome
Cited by: 36
Author(s): Jéssica Medina, Vera van der Velpen, Tony Teav, Yann Guitton, Héctor Gallart-Ayala, Julijana Ivanišević
Software Mentions: 2
Published: over 5 years ago
10.1128/AAC.00711-18
Population Pharmacokinetics of Tafenoquine, a Novel Antimalarial
Cited by: 16
Author(s): Nilay Thakkar, Justin A. Green, Gavin Koh, Stephan Duparc, David M. Tenero, Navin Goyal
Software Mentions: 2
Published: almost 8 years ago
10.3390/metabo10110473
Sphingolipid Profiling Reveals Different Extent of Ceramide Accumulation in Bovine Retroperitoneal and Subcutaneous Adipose Tissues
Cited by: 6
Author(s): Yue Hei Leung, Sonja Christiane Bäßler, Christian Koch, Theresa Scheu, Ulrich Meyer, Sven Dänicke, Korinna Huber, Ákos Kenéz
Software Mentions: 2
Published: almost 6 years ago
10.3390/metabo11080487
Antibiotic-Induced Dysbiosis of Microbiota Promotes Chicken Lipogenesis by Altering Metabolomics in the Cecum
Cited by: 15
Author(s): Tao Zhang, Hao Ding, Lan Chen, Yueyue Lin, Yongshuang Gong, Zhiming Pan, Genxi Zhang, Kaizhou Xie, Guojun Dai, Jinyu Wang
Software Mentions: 2
Published: about 5 years ago
10.3389/fcell.2021.676364
Role of RNA N6-Methyladenosine Modification in Male Infertility and Genital System Tumors
Cited by: 10
Author(s): Shuai Liu, Yongfeng Lao, Yanan Wang, Rongxin Li, Xuefeng Fang, Yunchang Wang, Xiaolong Gao, Zhong Dong
Software Mentions: 2
Published: over 5 years ago
10.3390/metabo11070444
Dereplication, Annotation, and Characterization of 74 Potential Antimicrobial Metabolites from Penicillium Sclerotiorum Using t-SNE Molecular Networks
Cited by: 11
Author(s): Téo Hebra, Nicolas Elie, Salomé Poyer, Elsa Van Elslande, David Touboul, Véronique Éparvier
Software Mentions: 2
Published: about 5 years ago
10.3389/fcell.2020.00289
H3K4me1 Distribution Predicts Transcription State and Poising at Promoters
Cited by: 55
Author(s): Sunhee Bae, Bluma J. Lesch
Software Mentions: 2
Published: over 6 years ago
10.1242/dev.152041
Control of inner cells' proportion by asymmetric divisions and ensuing resilience of cloned rabbit embryos
Cited by: 4
Author(s): Dimitri Fabrèges, Nathalie Daniel, Véronique Duranthon, Nadine Peyriéras
Software Mentions: 2
Published: over 8 years ago
10.3389/fcimb.2021.695515
Alteration in Oral Microbiome Among Men Who Have Sex With Men With Acute and Chronic HIV Infection on Antiretroviral Therapy
Cited by: 9
Author(s): Shuang Li, Junping Zhu, Bin Su, Huimin Wei, Fei Chen, Hongshan Liu, Jiaqi Wei, Xiaodong Yang, Qiuyue Zhang, Wei Xia, Hao Wu, Qiushui He, Tong Zhang
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.ppat.1009368
The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface
Cited by: 32
Author(s): Juan Carlos De la Concepcion, Josephine HR Maidment, Apinya Longya, Gui Xiao, Marina Franceschetti, Mark J. Banfield
Software Mentions: 2
Published: over 5 years ago
10.1186/s13568-021-01288-4
Growth performances, gastrointestinal epithelium and bacteria responses of Yellow-feathered chickens to kudzu-leaf flavonoids supplement
Cited by: 3
Author(s): Fuguang Xue, Gen Wan, Yunsen Xiao, Chuanbin Chen, Mei Qu, Long Xu
Software Mentions: 2
Published: almost 5 years ago
10.3389/fcimb.2020.00117
Comparative Metagenome-Assembled Genome Analysis of “Candidatus Lachnocurva vaginae”, Formerly Known as Bacterial Vaginosis-Associated Bacterium−1 (BVAB1)
Cited by: 44
Author(s): Johanna B. Holm, Michael France, Bing Ma, Elias McComb, Courtney K. Robinson, Aditya Mehta, Luke J. Tallon, Rebecca M. Brotman, Jacques Ravel
Software Mentions: 2
Published: over 6 years ago
10.3390/metabo9090176
Comparison of Differential Flavor Metabolites in Meat of Lubei White Goat, Jining Gray Goat and Boer Goat
Cited by: 16
Author(s): Wei‐Ting Wang, Bei Sun, Peisong Hu, Meifang Zhou, Su-Jun Sun, Pengfei Du, Yi Ru, Alexander Suvorov, Yongsheng Li, Yaobo Liu, Shoujing Wang
Software Mentions: 2
Published: almost 7 years ago
10.1037/dev0000903
Supporting the old but neglecting the young? The two faces of ageism.
Cited by: 20
Author(s): Christopher Bratt, Dominic Abrams, Hannah J. Swift
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.ppat.1009446
The herpesvirus accessory protein γ134.5 facilitates viral replication by disabling mitochondrial translocation of RIG-I
Cited by: 15
Author(s): Liu Xing, Yijie Ma, Kathleen Voss, Michiel van Gent, Ying Chan, Michaela U. Gack, Michael Gale, Bin He
Software Mentions: 2
Published: over 5 years ago
10.1111/ijfs.14773
Near‐infrared spectroscopy applications for high‐throughput phenotyping for cassava and yam: A review
Cited by: 15
Author(s): Emmanuel Oladeji Alamu, Ephraim Nuwamanya, Denis Cornet, Karima Meghar, Michael Adesokan, Thierry Tran, John Belalcázar, Lucienne Desfontaines, Fabrice Davrieux
Software Mentions: 2
Published: almost 6 years ago
10.3390/antibiotics10070771
Antibiotic Resistance and Virulence Profiles of Gram-Negative Bacteria Isolated from Loggerhead Sea Turtles (Caretta caretta) of the Island of Maio, Cape Verde
Cited by: 9
Author(s): Matilde Fernandes, Miguel L. Grilo, C. Carneiro, Eva Cunha, Luís Tavares, Juan Patiño-Martínez, Manuela Oliveira
Software Mentions: 2
Published: about 5 years ago
10.3390/metabo11030143
Solanum lycopersicum Seedlings. Metabolic Responses Induced by the Alkamide Affinin
Cited by: 0
Author(s): Tonatiu Campos-García, Jorge Molina‐Torres
Software Mentions: 2
Published: over 5 years ago
10.3389/fcimb.2021.665226
Metagenomic Next-Generation Sequencing of Bloodstream Microbial Cell-Free Nucleic Acid in Children With Suspected Sepsis in Pediatric Intensive Care Unit
Cited by: 19
Author(s): Gangfeng Yan, Jing Liu, Wei-Ming Chen, Chen Yang, Ye Cheng, Jinhao Tao, Xiaoyun Cai, Yang Zhou, Yixue Wang, Mingbang Wang, Guoping Li
Software Mentions: 2
Published: almost 5 years ago
10.1016/j.devcel.2017.01.015
Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development
Cited by: 87
Author(s): Vinay Bulusu, Nicole Prior, Marteinn T. Snaebjornsson, Andreas Kuehne, Katharina F. Sonnen, Jana Kress, Frank Stein, Carsten Schultz, Uwe Sauer, Alexander Aulehla
Software Mentions: 2
Published: over 9 years ago
10.3389/fmicb.2021.659602
Interaction Between the Intestinal Microbial Community and Transcriptome Profile in Common Carp (Cyprinus carpio L.)
Cited by: 8
Author(s): Shengyan Su, Xiaojun Jing, Chengfeng Zhang, Yiran Hou, Zhixun Li, Xiao Yang, Xiaolin Zhou, Pao Xu, Yongkai Tang, Jian Zhu
Software Mentions: 2
Published: about 5 years ago
10.3390/pathogens9110888
Genomic Features and Evolution of the Parapoxvirus during the Past Two Decades
Cited by: 4
Author(s): Xiaoting Yao, Ming Pang, Tianxing Wang, Xi Chen, Xidian Tang, Jianjun Chang, Dekun Chen, Wentao Ma
Software Mentions: 2
Published: almost 6 years ago
10.3389/fcimb.2021.633817
Molecular Epidemiology and Clone Transmission of Carbapenem-Resistant Acinetobacter baumannii in ICU Rooms
Cited by: 14
Author(s): Xiufeng Zhang, Fangping Li, Furqan Awan, Hongye Jiang, Zhenling Zeng, Weibiao Lv
Software Mentions: 2
Published: over 5 years ago
10.3389/fcimb.2015.00023
A systematic review and meta-analysis of the epidemiology of pathogenic Escherichia coli of calves and the role of calves as reservoirs for human pathogenic E. coli
Cited by: 95
Author(s): Rafał Kolenda, Michał Burdukiewicz, Peter Schierack
Software Mentions: 2
Published: over 11 years ago
10.3389/fmicb.2019.01105
Longitudinal Gut Bacterial Colonization and Its Influencing Factors of Low Birth Weight Infants During the First 3 Months of Life
Cited by: 17
Author(s): Cheng Chi, Yong Xue, Na Lv, Yanan Hao, Ruixia Liu, Yanxin Wang, Xin Ding, Hu Zeng, Geng Li, Qun Shen, Xiaosong Hu, Lijun Chen, Tiemin Jiang, Jianxin Zhao, Nicholas Buys, Jing Sun, Chenghong Yin, Baoli Zhu
Software Mentions: 2
Published: over 7 years ago
10.1002/dep2.97
Suppressed competitive exclusion enabled the proliferation of Permian/Triassic boundary microbialites
Cited by: 35
Author(s): William J. Foster, Katrin Heindel, Sylvain Richoz, Jana Gliwa, Daniel J. Lehrmann, Aymon Baud, Tea Kolar‐Jurkovšek, Dunja Aljinović, Bogdan Jurkovšek, Dieter Korn, Rowan C. Martindale, Jörn Peckmann
Software Mentions: 2
Published: almost 7 years ago
10.3389/fcimb.2021.709893
Elevated Neopterin Levels Predict Fatal Outcome in SARS-CoV-2-Infected Patients
Cited by: 13
Author(s): Manon Chauvin, Martin Larsen, Bibiana Quirant, Paul Quentric, Karim Dorgham, Luca Royer, Hélène Vallet, Amélie Guihot, Béhazine Combadière, Christophe Combadière, Jaume Barallat, Julien Mayaux, Charles‐Édouard Luyt, Alexis Mathian, Zahir Amoura, Jacques Boddaert, Fernándo Arméstar, Guy Gorochov, Eva Martı́nez-Cáceres, Delphine Sauce
Software Mentions: 2
Published: almost 5 years ago
10.3389/fcimb.2021.701278
SARS-CoV-2 Infects Endothelial Cells In Vivo and In Vitro
Cited by: 83
Author(s): Fengming Liu, Kun Han, Robert V Blair, Kornelia Kenst, Zhongnan Qin, Berin Upcin, Philipp Wörsdörfer, Cecily C. Midkiff, Joseph C. Mudd, Elizaveta Belyaeva, Nicholas S Milligan, Tyler D Rorison, Nicole Wagner, Jochen Bodem, Lars Dölken, Bertal H. Aktas, Richard S. Vander Heide, Xiao‐Ming Yin, Jay K. Kolls, Chad J. Roy, Jay Rappaport, Süleyman Ergün, Xuebin Qin
Software Mentions: 2
Published: about 5 years ago
10.1093/database/baaa111
MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle
Cited by: 2
Author(s): Olof Asplund, Johan Rung, Leif Groop, Rashmi B. Prasad, Ola Hansson
Software Mentions: 2
Published: over 6 years ago
10.3389/fcimb.2021.664247
Human Cytomegalovirus Genome Diversity in Longitudinally Collected Breast Milk Samples
Cited by: 9
Author(s): Jasper Götting, Katrin Lazar, Nicolás M. Suárez, Lars Steinbrück, Tabea Rabe, Rangmar Goelz, Thomas F. Schulz, Andrew J. Davison, Klaus Hamprecht, Tina Ganzenmueller
Software Mentions: 2
Published: over 5 years ago
10.3390/metabo9050082
Multi-Omics Analyses Detail Metabolic Reprogramming in Lipids, Carnitines, and Use of Glycolytic Intermediates between Prostate Small Cell Neuroendocrine Carcinoma and Prostate Adenocarcinoma
Cited by: 24
Author(s): Bei Gao, Hui Wen Lue, Jennifer Podolak, Sili Fan, Ying Zhang, Archana Serawat, Joshi J. Alumkal, Oliver Fiehn, George V. Thomas
Software Mentions: 2
Published: over 7 years ago
10.1016/j.dib.2021.107093
A standardized dataset for conservation prioritization of songbirds to support CITES
Cited by: 3
Author(s): Jacqueline Juergens, Simon Bruslund, Johanna Staerk, Rikke Oegelund Nielsen, Chris R. Shepherd, Boyd T.C. Leupen, Kanitha Krishnasamy, Serene C. L. Chng, John A Jackson, Rita da Silva, Antony Bagott, Rômulo Romeu Nóbrega Alves, Dalia Amor Conde
Software Mentions: 2
Published: about 5 years ago
10.1016/j.dib.2020.106282
Seasonal Ely Copper Mine Superfund site shotgun metagenomic and metatranscriptomic data analysis
Cited by: 1
Author(s): Lesley-Ann Giddings, George E. Chlipala, Heather Driscoll, Kieran Bhave, Kevin Kunstman, Stefan J. Green, Katherine Morillo, Holly Peterson, Mark Maienschein‐Cline
Software Mentions: 2
Published: almost 6 years ago
10.3389/fcimb.2020.577485
Comparison of Blood Bacterial Communities in Periodontal Health and Periodontal Disease
Cited by: 32
Author(s): David C. Emery, Tanya L. Cerajewska, Joon Seong, Malcolm Davies, Alex Paterson, Shelley J Allen, Nicola West
Software Mentions: 2
Published: over 5 years ago
10.1534/g3.119.400743
Evaluation of<i>Saccharomyces cerevisiae</i>Wine Yeast Competitive Fitness in Enologically Relevant Environments by Barcode Sequencing
Cited by: 9
Author(s): Simon A. Schmidt, Radka Kolouchova, Angus H. Forgan, Anthony R. Borneman
Software Mentions: 2
Published: over 6 years ago
10.3389/fcimb.2020.00124
Saliva Microbiome Changes in Patients With Periodontitis With and Without Chronic Obstructive Pulmonary Disease
Cited by: 14
Author(s): Lin Ma, Xuefen Li, Jitian Wang, Cheng Cheng, Tianyi Zhang, Xiaozhe Han, Yiqing Song, Zuomin Wang, Songlin Wang
Software Mentions: 2
Published: over 6 years ago