Ecosyste.ms: Papers

10.1084/jem.20210915

Blood transcriptomics reveal the evolution and resolution of the immune response in tuberculosis
Cited by: 27
Author(s): Olivier Tabone, Raman Verma, Akul Singhania, Probir Chakravarty, William J. Branchett, Christine M. Graham, Jo Lee, Trần Thị Huyền Trang, Frédéric Reynier, Philippe Leissner, Karine Kaiser, Marc Rodrigue, Gerrit Woltmann, Pranabashis Haldar, Anne O’Garra
Software Mentions: 27
Published: over 2 years ago

10.1111/cobi.13492

Matching expert range maps with species distribution model predictions
Cited by: 18
Author(s): Kumar P. Mainali, Trevor J. Hefley, Leslie Ries, William F. Fagan
Software Mentions: 26
Published: over 3 years ago

10.1371/journal.pntd.0009252

Optimising predictive modelling of Ross River virus using meteorological variables
Cited by: 4
Author(s): Iain S. Koolhof, Simon M. Firestone, SS Bettiol, Michael A. Charleston, Katherine B Gibney, Peter J. Neville, Andrew Jardine, Scott Carver
Software Mentions: 23
Published: about 3 years ago

10.7717/peerj.4278

Forecasting biodiversity in breeding birds using best practices
Cited by: 37
Author(s): David J. Harris, Shawn D. Taylor, Ethan P. White
Software Mentions: 21
Published: over 6 years ago

10.7717/peerj.5457

Global mapping of potential natural vegetation: an assessment of machine learning algorithms for estimating land potential
Cited by: 84
Author(s): Tomislav Hengl, Markus Walsh, Jonathan Sanderman, Ichsani Wheeler, Sandy P. Harrison, Iain Colin Prentice
Software Mentions: 17
Published: over 5 years ago

10.1186/1471-2105-9-439

CMA – a comprehensive Bioconductor package for supervised classification with high dimensional data
Cited by: 90
Author(s): Martin Slawski, Martin Däumer, Anne‐Laure Boulesteix
Software Mentions: 16
Published: over 15 years ago

10.1371/journal.pntd.0007969

Severity Index for Suspected Arbovirus (SISA): Machine learning for accurate prediction of hospitalization in subjects suspected of arboviral infection
Cited by: 10
Author(s): Rachel Sippy, Daniel F. Farrell, Daniel A. Lichtenstein, Ryan Nightingale, Megan Harris, Joseph Toth, Paris Hantztidiamantis, Nicholas Usher, Cinthya Cueva Aponte, Julio Barzallo Aguilar, Anthony Puthumana, Christina D. Lupone, Timothy P. Endy, Sadie J. Ryan, Anna M. Stewart-Ibarra
Software Mentions: 16
Published: over 4 years ago

10.1371/journal.pone.0188955

Gbm.auto: A software tool to simplify spatial modelling and Marine Protected Area planning
Cited by: 19
Author(s): Simon Dedman, Rick Officer, Maurice Clarke, David G. Reid, Deirdre Brophy
Software Mentions: 15
Published: over 6 years ago

10.1371/journal.pone.0135784

Comparison of Nine Statistical Model Based Warfarin Pharmacogenetic Dosing Algorithms Using the Racially Diverse International Warfarin Pharmacogenetic Consortium Cohort Database
Cited by: 38
Author(s): Rong Liu, Xi Li, Wei Zhang, Hong‐Hao Zhou
Software Mentions: 13
Published: over 8 years ago

10.1038/srep36460

Overlooked habitat of a vulnerable gorgonian revealed in the Mediterranean and Eastern Atlantic by ecological niche modelling
Cited by: 28
Author(s): Joana Boavida, Jorge Assis, Inga Silva, Ester A. Serrão
Software Mentions: 13
Published: over 7 years ago

10.1534/g3.119.400728

Efficient Estimation of Marker Effects in Plant Breeding
Cited by: 10
Author(s): Alencar Xavier
Software Mentions: 13
Published: over 4 years ago

10.1002/ece3.5295

<i>Acacia dealbata</i> invasion in Chile: Surprises from climatic niche and species distribution models
Cited by: 12
Author(s): Bárbara Langdon, Aníbal Pauchard, Ramiro O. Bustamante
Software Mentions: 12
Published: almost 5 years ago

10.1371/journal.pone.0231500

Propensity score adjustment using machine learning classification algorithms to control selection bias in online surveys
Cited by: 23
Author(s): Ramón Ferri‐García, María del Mar Rueda
Software Mentions: 12
Published: about 4 years ago

10.1002/cam4.2786

FOLFOX treatment response prediction in metastatic or recurrent colorectal cancer patients via machine learning algorithms
Cited by: 24
Author(s): Wei Lu, Dongliang Fu, Xianglong Kong, Zhiheng Huang, Maxwell Hwang, Yaowu Zhu, Liubo Chen, Kai Jiang, Xinlin Li, Yihua Wu, Jun Li, Ying Yuan, Kefeng Ding
Software Mentions: 12
Published: over 4 years ago

10.1186/s12967-017-1285-6

In silico prediction of novel therapeutic targets using gene–disease association data
Cited by: 79
Author(s): Enrico Ferrero, Ian Dunham, Philippe Sanséau
Software Mentions: 12
Published: over 6 years ago

10.1186/s40560-021-00531-1

Development and validation of an online model to predict critical COVID-19 with immune-inflammatory parameters
Cited by: 7
Author(s): Yue Gao, Lingxi Chen, Jianhua Chi, Shaoqing Zeng, Xikang Feng, Huayi Li, Dan Liŭ, Xiang Feng, Siyuan Wang, Ya Wang, Rui Yu, Yuan Yuan, Sen Xu, Chunrui Li, Wei Zhang, Shuai Cheng Li, Qinglei Gao
Software Mentions: 12
Published: over 3 years ago

10.1002/ece3.7294

Determinants of habitat suitability models transferability across geographically disjunct populations: Insights from <i>Vipera ursinii urs</i> <i>inii</i>
Cited by: 8
Author(s): Francesco Cerasoli, Aurélien Besnard, Marc-Antoine Marchand, Paola D’Alessandro, Mattia Iannella, Maurizio Biondi
Software Mentions: 12
Published: about 3 years ago

10.1038/srep44348

Major shifts at the range edge of marine forests: the combined effects of climate changes and limited dispersal
Cited by: 70
Author(s): Jorge Assis, Estíbaliz Berecibar, Bruno Claro, Filipe Alberto, Daniel C. Reed, Peter T. Raimondi, Ester Á. Serrão
Software Mentions: 11
Published: about 7 years ago

10.1371/journal.pone.0183626

Species distribution models: A comparison of statistical approaches for livestock and disease epidemics
Cited by: 21
Author(s): Tracey Hollings, Andrew P. Robinson, Mary van Andel, Chris Jewell, Mark A. Burgman
Software Mentions: 11
Published: over 6 years ago

10.1038/s41598-018-33986-8

Identification of Novel Genes in Human Airway Epithelial Cells associated with Chronic Obstructive Pulmonary Disease (COPD) using Machine-Based Learning Algorithms
Cited by: 24
Author(s): Shayan Mostafaei, Anoshirvan Kazemnejad, Sadegh Azimzadeh Jamalkandi, Soroush Amirhashchi, Seamas C. Donnelly, Michelle E. Armstrong, Mohammad Doroudian
Software Mentions: 11
Published: over 5 years ago

10.3389/fphys.2021.714195

Development and Validation of a Prediction Model for Elevated Arterial Stiffness in Chinese Patients With Diabetes Using Machine Learning
Cited by: 5
Author(s): Qingqing Li, Wenhui Xie, Liping Li, Lijing Wang, Qinyi You, Lu Chen, Jing Li, Yilang Ke, Jun Fang, Libin Liu, Huashan Hong
Software Mentions: 11
Published: over 2 years ago

10.1186/s12859-018-2105-6

Building protein-protein interaction networks for Leishmania species through protein structural information
Cited by: 17
Author(s): Crhisllane Rafaele dos Santos Vasconcelos, Túlio de Lima Campos, Antônio Mauro Rezende
Software Mentions: 11
Published: about 6 years ago

10.1186/1476-069X-13-57

The identification of complex interactions in epidemiology and toxicology: a simulation study of boosted regression trees
Cited by: 45
Author(s): Erik Lampa, Lars Lind, P. Monica Lind, Anna Bornefalk-Hermansson
Software Mentions: 11
Published: almost 10 years ago

10.1038/s41598-020-58111-6

Projected distribution and climate refugia of endangered Kashmir musk deer Moschus cupreus in greater Himalaya, South Asia
Cited by: 19
Author(s): Paras B. Singh, Kumar P. Mainali, Zhigang Jiang, Arjun Thapa, Naresh Subedi, Muhammad Naeem Awan, Orus Ilyas, Himal Luitel, Zhixin Zhou, Huijian Hu
Software Mentions: 11
Published: over 4 years ago

10.1038/srep42192

Application of Machine-Learning Models to Predict Tacrolimus Stable Dose in Renal Transplant Recipients
Cited by: 86
Author(s): Jie Tang, Rong Liu, Yueli Zhang, Mou-Ze Liu, HU Yong-fang, Minghai Shao, Lan Zhu, Hua‐Wen Xin, Feng Gao, Wenjun Shang, Xiang‐Gao Meng, Lirong Zhang, Yingzi Ming, Wei Zhang
Software Mentions: 11
Published: over 7 years ago

10.1038/s41598-021-81110-0

G-computation and machine learning for estimating the causal effects of binary exposure statuses on binary outcomes
Cited by: 9
Author(s): Françoise Le Borgne, Arthur Chatton, Maxime Léger, Rémi Lenain, Yohann Foucher
Software Mentions: 10
Published: over 3 years ago

10.1038/s41598-020-75476-w

Mass wasting susceptibility assessment of snow avalanches using machine learning models
Cited by: 44
Author(s): Bahram Choubin, Moslem Borji, Farzaneh Sajedi Hosseini, Amir Mosavi, Adrienn Dineva
Software Mentions: 10
Published: over 3 years ago

10.1038/s41598-019-48986-5

Assessing Susceptibility of Debris Flow in Southwest China Using Gradient Boosting Machine
Cited by: 36
Author(s): Baofeng Di, Hanyue Zhang, Yongyao Liu, Jierui Li, Ningsheng Chen, Constantine A. Stamatopoulos, Yuzhou Luo, Yu Zhan
Software Mentions: 10
Published: over 4 years ago

10.1038/s41598-017-05505-8

Machine Learning Algorithms for Risk Prediction of Severe Hand-Foot-Mouth Disease in Children
Cited by: 15
Author(s): Bin Zhang, Xiang Wan, Fu Ouyang, Yu Dong, Dehui Luo, Jing Liu, Long Liang, Wen Bo Chen, Xiao Luo, Xiao Mo, Lu Zhang, Wen Hui Huang, Shu Fang Pei, Bao Liang Guo, Chun Liang, Long Zhou, Shui Xing Zhang
Software Mentions: 10
Published: almost 7 years ago

10.1186/s13071-018-3066-3

Modelling the spatial distribution of aquatic insects (Order Hemiptera) potentially involved in the transmission of Mycobacterium ulcerans in Africa
Cited by: 9
Author(s): Jorge Cano, Antonio Rodrı́guez Rodrı́guez, Hamish Simpson, Earnest Njih Tabah, José Luís Graña Gómez, Rachel L. Pullan
Software Mentions: 10
Published: over 5 years ago

10.1007/s00125-018-4641-z

Multiplex proteomics for prediction of major cardiovascular events in type 2 diabetes
Cited by: 38
Author(s): Christoph Nowak, Axel C. Carlsson, Carl Johan Östgren, Fredrik Nyström, Moudud Alam, Tobias Feldreich, Johan Sundström, Juan-Jesús Carrero, Jerzy Leppert, Pär Hedberg, Egil Henriksen, A. C. C. Cordeiro, Vilmantas Giedraitis, Lars Lind, Erik Ingelsson, Tove Fall, Johan Ärnlöv
Software Mentions: 10
Published: almost 6 years ago

10.1371/journal.pone.0128124

Oceanographic Conditions Limit the Spread of a Marine Invader along Southern African Shores
Cited by: 57
Author(s): Jorge Assis, Mirta Zupan, Katy R. Nicastro, Gerardo I. Zardi, Christopher D. McQuaid, Ester Á. Serrão
Software Mentions: 10
Published: almost 9 years ago

10.1371/journal.pntd.0008940

Using host traits to predict reservoir host species of rabies virus
Cited by: 27
Author(s): Katherine E. L. Worsley‐Tonks, Luis E. Escobar, Roman Biek, Mariana Castaneda-Guzman, Meggan E. Craft, Daniel G. Streicker, Lauren A. White, Nicholas M. Fountain-Jones
Software Mentions: 10
Published: over 3 years ago

10.1371/journal.pone.0239378

The path to international medals: A supervised machine learning approach to explore the impact of coach-led sport-specific and non-specific practice
Cited by: 7
Author(s): Michael Barth, Arne Güllich, Christian Raschner, Eike Emrich
Software Mentions: 10
Published: over 3 years ago

10.1186/1471-2105-16-S6-S3

Machine-learning scoring functions for identifying native poses of ligands docked to known and novel proteins
Cited by: 42
Author(s): Hossam M. Ashtawy, Nihar R. Mahapatra
Software Mentions: 9
Published: about 9 years ago

10.1038/s41598-018-38054-9

Species distribution models throughout the invasion history of Palmer amaranth predict regions at risk of future invasion and reveal challenges with modeling rapidly shifting geographic ranges
Cited by: 50
Author(s): Ryan D. Briscoe Runquist, Thomas A. Lake, Peter Tiffin, David A. Moeller
Software Mentions: 9
Published: about 5 years ago

10.1038/s41437-018-0059-0

Unexpected mixed-mode transmission and moderate genetic regulation of Symbiodinium communities in a brooding coral
Cited by: 46
Author(s): Kate M. Quigley, Patricia A. Warner, Line K. Bay, Bette L. Willis
Software Mentions: 9
Published: over 6 years ago

10.1371/journal.pone.0225936

Improving distribution models of riparian vegetation with mobile laser scanning and hydraulic modelling
Cited by: 2
Author(s): Tua Nylén, Elina Kasvi, Jouni Salmela, Harri Kaartinen, Antero Kukko, Anttoni Jaakkola, Juha Hyyppä, Petteri Alho
Software Mentions: 9
Published: over 4 years ago

10.7717/peerj.3771

Habitat suitability—density relationship in an endangered woodland species: the case of the Blue Chaffinch (<i>Fringilla polatzeki</i>)
Cited by: 8
Author(s): Luis M. Carrascal, Ángel C. Moreno, A. Delgado, Víctor Suárez, Domingo Trujillo
Software Mentions: 9
Published: over 6 years ago

10.1371/journal.pone.0236856

The macroecology of the COVID-19 pandemic in the Anthropocene
Cited by: 32
Author(s): Piotr Skórka, Beata Grzywacz, Dawid Moroń, Magdalena Lenda
Software Mentions: 9
Published: almost 4 years ago

10.5334/jors.277

Using SAS Macros for Multiple Mediation Analysis in R
Cited by: 2
Author(s): Paige L. Fisher, Wentao Cao, Qingzhao Yu
Software Mentions: 9
Published: over 3 years ago

10.3390/e21050513

Mimicking Anti-Viruses with Machine Learning and Entropy Profiles
Cited by: 10
Author(s): Héctor D. Menéndez, José Luís Llorente
Software Mentions: 9
Published: almost 5 years ago

10.1186/1471-2148-14-9

Caves as microrefugia: Pleistocene phylogeography of the troglophilic North American scorpion Pseudouroctonus reddelli
Cited by: 36
Author(s): Robert W. Bryson, Lorenzo Prendini, Warren E. Savary, Peter B. Pearman
Software Mentions: 9
Published: over 10 years ago

10.7150/jgen.41196

crispRdesignR: A Versatile Guide RNA Design Package in R for CRISPR/Cas9 Applications
Cited by: 2
Author(s): Dylan Beeber, Frédéric J. J. Chain
Software Mentions: 9
Published: over 4 years ago

10.1186/s12859-016-1149-8

Boosting the discriminatory power of sparse survival models via optimization of the concordance index and stability selection
Cited by: 27
Author(s): Andreas Mayr, Benjamin Hofner, Matthias Schmid
Software Mentions: 9
Published: almost 8 years ago

10.1038/s41598-021-86529-z

Impact of land cover and landfills on the breeding effect and nest occupancy of the white stork in Poland
Cited by: 12
Author(s): Joanna T. Białas, Łukasz Dylewski, Andrzej Dylik, Tomasz Janiszewski, Ireneusz Kaługa, Tomek Królak, Robert Kruszyk, Krzysztof Pawlukojć, Zuzanna Pestka, M. Polakowski, Adam Zbyryt, Marcin Tobółka
Software Mentions: 8
Published: about 3 years ago

10.1098/rstb.2018.0335

Mosquito and primate ecology predict human risk of yellow fever virus spillover in Brazil
Cited by: 41
Author(s): Marissa L. Childs, Nicole Nova, Justine Colvin, Erin A. Mordecai
Software Mentions: 8
Published: almost 5 years ago

10.1371/journal.pone.0196865

Predicting potential drug-drug interactions on topological and semantic similarity features using statistical learning
Cited by: 89
Author(s): Andrej Kastrin, Polonca Ferk, Brane Leskošek
Software Mentions: 8
Published: about 6 years ago

10.1038/s41598-019-54496-1

Predicting the spatial abundance of Ixodes ricinus ticks in southern Scandinavia using environmental and climatic data
Cited by: 9
Author(s): Lene Jung Kjær, Arnulf Soleng, Kristin Skarsfjord Edgar, Heidi Elisabeth Heggen Lindstedt, Katrine M. Paulsen, Åshild Kristine Andreassen, Lars Korslund, Vivian Kjelland, Audun Slettan, Snorre Stuen, Petter Kjellander, Madeleine Christensson, Malin Teräväinen, Andreas Baum, Kirstine Klitgaard, René Bødker
Software Mentions: 8
Published: over 4 years ago

10.1186/s12884-018-1971-2

Comparison of logistic regression with machine learning methods for the prediction of fetal growth abnormalities: a retrospective cohort study
Cited by: 70
Author(s): Stefan Kuhle, Bryan Maguire, Hongqun Zhang, David C. Hamilton, Alexander C. Allen, K.S. Joseph, Victoria M. Allen
Software Mentions: 8
Published: almost 6 years ago

10.1371/journal.pone.0106885

Quantifying Shark Distribution Patterns and Species-Habitat Associations: Implications of Marine Park Zoning
Cited by: 113
Author(s): Mario Espinoza, Michael Cappo, Michelle R. Heupel, Andrew J. Tobin, Colin A. Simpfendorfer
Software Mentions: 8
Published: over 9 years ago

10.1371/journal.pone.0131530

Genes Left Behind: Climate Change Threatens Cryptic Genetic Diversity in the Canopy-Forming Seaweed Bifurcaria bifurcata
Cited by: 46
Author(s): João Neiva, Jorge Assis, Nelson Castilho Coelho, Francisco Fernandes, Gareth A. Pearson, Ester Á. Serrão
Software Mentions: 8
Published: almost 9 years ago

10.1038/srep30086

Random Bits Forest: a Strong Classifier/Regressor for Big Data
Cited by: 22
Author(s): Yi Wang, Li Yi, Weilin Pu, Kathryn Wen, Yin Yao Shugart, Momiao Xiong, Li Jin
Software Mentions: 8
Published: almost 8 years ago

10.1038/s41389-019-0157-8

DeepCC: a novel deep learning-based framework for cancer molecular subtype classification
Cited by: 119
Author(s): Feng Gao, Wei Wang, Miaomiao Tan, Lina Zhu, Yuchen Zhang, Evelyn Fessler, Louis Vermeulen, Xin Wang
Software Mentions: 8
Published: almost 5 years ago

10.1007/s00259-020-04864-1

A CT-based radiomics model to detect prostate cancer lymph node metastases in PSMA radioguided surgery patients
Cited by: 25
Author(s): Jan C. Peeken, Mohamed A. Shouman, Markus Kroenke, Isabel Rauscher, Tobias Maurer, Jürgen E. Gschwend, Matthias Eiber, Stephanie E. Combs
Software Mentions: 8
Published: almost 4 years ago

10.1136/bmjopen-2020-040132

Prediction of perinatal death using machine learning models: a birth registry-based cohort study in northern Tanzania
Cited by: 27
Author(s): Innocent B. Mboya, Michael Johnson Mahande, Mohanad Mohammed, Joseph Obure, Henry Mwambi
Software Mentions: 8
Published: over 3 years ago

10.1007/s10278-018-0154-z

Automatic Labeling of Special Diagnostic Mammography Views from Images and DICOM Headers
Cited by: 5
Author(s): Dmytro Lituiev, Hari Trivedi, Maryam Panahiazar, Beau Norgeot, Youngho Seo, Benjamin L. Franc, Roy Harnish, Michael Kawczynski, Dexter Hadley
Software Mentions: 8
Published: over 5 years ago

10.7717/peerj-cs.642

Cultural differences in music features across Taiwanese, Japanese and American markets
Cited by: 2
Author(s): K. M. Liew, Yukiko Uchida, Igor de Almeida
Software Mentions: 7
Published: almost 3 years ago

10.3389/fmed.2021.635771

Application of Machine Learning Algorithms to Predict Central Lymph Node Metastasis in T1-T2, Non-invasive, and Clinically Node Negative Papillary Thyroid Carcinoma
Cited by: 35
Author(s): Jiang Zhu, Jinxin Zheng, Longfei Li, Rui Huang, Haoyu Ren, Denghui Wang, Zhijun Dai, Xinliang Su
Software Mentions: 7
Published: about 3 years ago

10.3389/fphar.2021.605764

Robust Performance of Potentially Functional SNPs in Machine Learning Models for the Prediction of Atorvastatin-Induced Myalgia
Cited by: 7
Author(s): Brandon Nick Sern Ooi, Raechell, Ariel Fangting Ying, Yong Zher Koh, Jian Yu, Sherman W. L. Yee, Justin H. S. Lee, Samuel S. Chong, Jack Wei Chieh Tan, Jing Liu, Caroline Lee, Chester L. Drum
Software Mentions: 7
Published: about 3 years ago

10.1002/ece3.7830

Optimizing noninvasive sampling of a zoonotic bat virus
Cited by: 10
Author(s): J. R. Giles, Alison J. Peel, Konstans Wells, Raina K. Plowright, Hamish McCallum, Olivier Restif
Software Mentions: 7
Published: over 2 years ago

10.3390/e23040477

Hybrid Basketball Game Outcome Prediction Model by Integrating Data Mining Methods for the National Basketball Association
Cited by: 11
Author(s): Wei-Jen Chen, Mao-Jhen Jhou, Tian–Shyug Lee, Chi-Jie Lu
Software Mentions: 7
Published: about 3 years ago

10.1007/s10994-019-05848-5

An evaluation of machine-learning for predicting phenotype: studies in yeast, rice, and wheat
Cited by: 79
Author(s): Nastasiya F. Grinberg, Oghenejokpeme I. Orhobor, Ross D. King
Software Mentions: 7
Published: over 4 years ago

10.3390/jcm9124131

Predicting the Response of High Frequency Spinal Cord Stimulation in Patients with Failed Back Surgery Syndrome: A Retrospective Study with Machine Learning Techniques
Cited by: 5
Author(s): Lisa Goudman, Jean‐Pierre Van Buyten, Ann De Smedt, Iris Smet, Marieke Devos, Ali Jerjir, Maarten Moens
Software Mentions: 7
Published: over 3 years ago

10.1002/ece3.3170

Phylogeography of a migratory songbird across its Canadian breeding range: Implications for conservation units
Cited by: 17
Author(s): Samuel Haché, Erin M. Bayne, Marc‐André Villard, H. C. Proctor, Corey S. Davis, Diana Stralberg, Jasmine K. Janes, Michael T. Hallworth, Kenneth R. Foster, Easwaramurthyvasi Chidambara-vasi, Alexandra A. Grossi, Jamieson C. Gorrell, Richard Krikun
Software Mentions: 7
Published: almost 7 years ago

10.3390/ijerph18020565

Does Last Year’s Cost Predict the Present Cost? An Application of Machine Leaning for the Japanese Area-Basis Public Health Insurance Database
Cited by: 4
Author(s): Yasuo Nomura, Yoshimasa Ishii, Yota Chiba, Shunsuke Suzuki, Akira Suzuki, Senichi Suzuki, Kenji Morita, Joji Tanabe, Koji Yamakawa, Yasuo Ishiwata, Misao Ishikawa, Kaoru Sogabe, Erika Kakuta, Ayako Okada, Ryoko Otsuka, Nobuhiro Hanada
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pcbi.1008831

Accuracy in the prediction of disease epidemics when ensembling simple but highly correlated models
Cited by: 9
Author(s): Denis A. Shah, E. D. De Wolf, Pierce A. Paul, L. V. Madden
Software Mentions: 6
Published: about 3 years ago

10.3389/fnins.2019.01203

Multimodal Integration of Brain Images for MRI-Based Diagnosis in Schizophrenia
Cited by: 25
Author(s): Raymond Salvador, Erick Jorge Canales-Rodríguez, Amalia Guerrero-Pedraza, Salvador Sarró, Diana Tordesillas‐Gutiérrez, Teresa Maristany, Benedicto Crespo‐Facorro, Peter McKenna, Edith Pomarol‐Clotet
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0073432

The Impact of Climate Change on the Potential Distribution of Agricultural Pests: The Case of the Coffee White Stem Borer (Monochamus leuconotus P.) in Zimbabwe
Cited by: 66
Author(s): Dumisani Kutywayo, Abel Chemura, Winmore Kusena, Pardon Chidoko, Caleb Mahoya
Software Mentions: 6
Published: over 10 years ago

10.1098/rstb.2018.0337

Ecological indicators of mammal exposure to Ebolavirus
Cited by: 14
Author(s): John P. Schmidt, Sean P. Maher, John M. Drake, Tao Huang, Maxwell J. Farrell, Barbara A. Han
Software Mentions: 6
Published: almost 5 years ago

10.7717/peerj.11972

The modeled distribution of corals and sponges surrounding the Salas y Gómez and Nazca ridges with implications for high seas conservation
Cited by: 6
Author(s): Samuel E. Georgian, Lance E. Morgan, Daniel Wagner
Software Mentions: 6
Published: over 2 years ago

10.1002/clc.23532

Predicting <scp>90 day</scp> acute heart failure readmission and death using machine <scp>learning‐supported</scp> decision analysis
Cited by: 20
Author(s): FarnazBabaie Sarijaloo, Jaeyoung Park, Xiang Zhong, Anita Wokhlu
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-020-74486-y

Personal identifiability of user tracking data during observation of 360-degree VR video
Cited by: 65
Author(s): Mark Roman Miller, Fernanda Herrera, Hanseul Jun, James A. Landay, Jeremy N. Bailenson
Software Mentions: 6
Published: over 3 years ago

10.1111/eva.12958

Genetic data and climate niche suitability models highlight the vulnerability of a functionally important plant species from south‐eastern Australia
Cited by: 10
Author(s): Adam D. Miller, Craig R. Nitschke, Andrew R. Weeks, William Weatherly, Simon Heyes, Steve Sinclair, Owen J. Holland, Aggie Stevenson, Linda Broadhurst, Susan E. Hoebee, Craig D. H. Sherman, John Morgan
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pone.0144590

The Potential Influence of Bumble Bee Visitation on Foraging Behaviors and Assemblages of Honey Bees on Squash Flowers in Highland Agricultural Ecosystems
Cited by: 5
Author(s): Zhenghua Xie, Dongdong Pan, Jonathan Teichroew, Jiandong An
Software Mentions: 6
Published: over 8 years ago

10.1016/j.envpol.2020.116011

Changes in air quality during COVID-19 ‘lockdown’ in the United Kingdom
Cited by: 90
Author(s): Calvin Jephcote, Anna Hansell, Kathryn Adams, John Gulliver
Software Mentions: 6
Published: about 3 years ago

10.1038/s41598-018-27859-3

Environmental drivers of spatiotemporal foraging intensity in fruit bats and implications for Hendra virus ecology
Cited by: 30
Author(s): J. R. Giles, Peggy Eby, Hazel Ruth Parry, Alison J. Peel, Raina K. Plowright, David A. Westcott, Hamish McCallum
Software Mentions: 6
Published: almost 6 years ago

10.1186/s13071-015-1038-4

Malaria vectors in South America: current and future scenarios
Cited by: 53
Author(s): Gabriel Zorello Laporta, Yvonne‐Marie Linton, Richard C. Wilkerson, Eduardo Sterlino Bergo, Sandra Sayuri Nagaki, Denise Cristina Sant'Ana, Maria Anice Mureb Sallum
Software Mentions: 6
Published: almost 9 years ago

10.3389/fgene.2018.00237

Genomic Prediction of Breeding Values Using a Subset of SNPs Identified by Three Machine Learning Methods
Cited by: 109
Author(s): Bo Li, Nanxi Zhang, You‐Gan Wang, Andrew W. George, Antônio Reverter, Yutao Li
Software Mentions: 6
Published: almost 6 years ago

10.1002/ece3.3294

Enhanced effects of biotic interactions on predicting multispecies spatial distribution of submerged macrophytes after eutrophication
Cited by: 2
Author(s): Kun Song, Yichong Cui, Xijin Zhang, Ying Pan, Junli Xu, Kaiqin Xu, Da Liu
Software Mentions: 6
Published: over 6 years ago

10.1002/ece3.2787

Re-establishing the pecking order: Niche models reliably predict suitable habitats for the reintroduction of red-billed oxpeckers
Cited by: 11
Author(s): Riddhika Kalle, Leigh Combrink, Tharmalingam Ramesh, Colleen T. Downs
Software Mentions: 6
Published: about 7 years ago

10.1155/2016/6794916

Determining Cutoff Point of Ensemble Trees Based on Sample Size in Predicting Clinical Dose with DNA Microarray Data
Cited by: 7
Author(s): Selen Yilmaz İşikhan, Erdem Karabulut, Celal Reha Alpar
Software Mentions: 6
Published: over 8 years ago

10.1371/journal.pone.0043846

Long-Term Field Data and Climate-Habitat Models Show That Orangutan Persistence Depends on Effective Forest Management and Greenhouse Gas Mitigation
Cited by: 20
Author(s): Stephen D. Gregory, Barry W. Brook, Benoît Goossens, Marc Ancrenaz, Rayner Alfred, Laurentius Ambu, Damien A. Fordham
Software Mentions: 6
Published: over 11 years ago

10.1371/journal.pntd.0008616

Predicting the environmental suitability and population at risk of podoconiosis in Africa
Cited by: 8
Author(s): Kebede Deribe, Hamish Simpson, Rachel L. Pullan, Mbonigaba Jean Bosco, Samuel Wanji, Nicole Davis Weaver, Christopher J L Murray, Melanie Newport, Simon I. Hay, Gail Davey, Jorge Cano
Software Mentions: 6
Published: over 3 years ago

10.1186/s12879-018-3066-0

Machine learning methods reveal the temporal pattern of dengue incidence using meteorological factors in metropolitan Manila, Philippines
Cited by: 79
Author(s): Thaddeus M. Carvajal, Katherine M. Viacrusis, Lara Fides T. Hernandez, Howell T. Ho, Divina Amalin, Kozo Watanabe
Software Mentions: 6
Published: about 6 years ago

10.1371/journal.pntd.0008179

Predicting disease risk areas through co-production of spatial models: The example of Kyasanur Forest Disease in India’s forest landscapes
Cited by: 26
Author(s): Bethan V. Purse, Narayanaswamy Darshan, Gudadappa S. Kasabi, F. Gerard, Abhishek Samrat, Charles George, Abi Tamim Vanak, Meera Anna Oommen, Mujeeb Rahman, Sarah J. Burthe, Juliette Young, Prashanth Nuggehalli Srinivas, Stefanie Schäfer, Peter A. Henrys, Vijay K. Sandhya, Mohammed Mudassar Chanda, Manoj Murhekar, S.L. Hoti, Shivani K. Kiran
Software Mentions: 6
Published: about 4 years ago

10.1136/bmjgh-2018-000730

Predicted distribution and burden of podoconiosis in Cameroon
Cited by: 19
Author(s): Kebede Deribe, Jorge Cano, Abdel Jélil Njouendou, Mathias Esum Eyong, Amuam Andrew Beng, Emanuele Giorgi, David M. Pigott, Rachel L. Pullan, Abdisalan M. Noor, Fikre Enquselassie, Christopher J L Murray, Simon I. Hay, Melanie J. Newport, Gail Davey, Samuel Wanji
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0187344

Assessing risk of fibrosis progression and liver-related clinical outcomes among patients with both early stage and advanced chronic hepatitis C
Cited by: 23
Author(s): Monica A. Konerman, Dongxia Lu, Yiwei Zhang, Mary Thomson, Ji Zhu, Aashesh Verma, Boang Liu, Nizar Talaat, Ulysses Balis, Peter Higgins, Anna S. Lok, Akbar K. Waljee
Software Mentions: 5
Published: over 6 years ago

10.3389/fonc.2020.00909

Preoperative CT Radiomics Predicting the SSIGN Risk Groups in Patients With Clear Cell Renal Cell Carcinoma: Development and Multicenter Validation
Cited by: 3
Author(s): Yi Jiang, Wuchao Li, Chencui Huang, Chong Tian, Qi Chen, Xian‐Chun Zeng, Yin Cao, Yi Chen, Yintong Yang, Heng Liu, Yonghua Bo, Chenggong Luo, Yiming Li, Tijiang Zhang, Rongping Wang
Software Mentions: 5
Published: almost 4 years ago

10.1371/journal.pone.0195221

Delineation and mapping of coastal shark habitat within a shallow lagoonal estuary
Cited by: 10
Author(s): Charles W. Bangley, Lee M. Paramore, Simon Dedman, Roger A. Rulifson
Software Mentions: 5
Published: about 6 years ago

10.1186/s12887-020-02411-3

Utility of medical record diagnostic codes to ascertain attention-deficit/hyperactivity disorder and learning disabilities in populations of children
Cited by: 6
Author(s): Yu Shi, Phillip J. Schulte, Andrew C. Hanson, Michael J. Zaccariello, Dayu Hu, Sheri Crow, Randall P. Flick, David O. Warner
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0199999

Detecting cerebrovascular changes in the brain caused by hypertension in atrial fibrillation group using acoustocerebrography
Cited by: 1
Author(s): Wioletta Dobkowska-Chudoń, Mirosław Wrobel, P. Karłowicz, A Dąbrowski, Andrzej Krupienicz, Tomasz Targowski, Andrzej Nowicki, Robert Olszewski
Software Mentions: 5
Published: almost 6 years ago

10.1186/1471-2288-14-99

Detection of independent associations in a large epidemiologic dataset: a comparison of random forests, boosted regression trees, conventional and penalized logistic regression for identifying independent factors associated with H1N1pdm influenza infections
Cited by: 33
Author(s): Yohann Mansiaux, Fabrice Carrat
Software Mentions: 5
Published: over 9 years ago

10.1038/s41598-017-15644-7

Limited evidence of declining growth among moisture-limited black and white spruce in interior Alaska
Cited by: 29
Author(s): Patrick F. Sullivan, Robert R. Pattison, Annalis H. Brownlee, Sean M. P. Cahoon, Teresa N. Hollingsworth
Software Mentions: 5
Published: over 6 years ago

10.1186/s12911-020-01271-2

Using machine learning methods to predict in-hospital mortality of sepsis patients in the ICU
Cited by: 64
Author(s): Guilan Kong, Ke Lin, Yonghua Hu
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-017-18321-x

Clay content and pH: soil characteristic associations with the persistent presence of chronic wasting disease in northern Illinois
Cited by: 16
Author(s): Sheena J. Dorak, Michelle L. Green, Michelle M. Wander, Marilyn O. Ruiz, Michael Buhnerkempe, Ting Tian, J. Novakofski, Nohra E. Mateus‐Pinilla
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0135350

Conservation Status of North American Birds in the Face of Future Climate Change
Cited by: 90
Author(s): Gary Langham, Justin G. Schuetz, Trisha Distler, Candan U. Soykan, Chad B. Wilsey
Software Mentions: 5
Published: over 8 years ago

10.1186/s13071-018-3278-6

Distribution of Anopheles vectors and potential malaria transmission stability in Europe and the Mediterranean area under future climate change
Cited by: 46
Author(s): Elke Hertig
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0245298

Machine learning and statistics to qualify environments through multi-traits in Coffea arabica
Cited by: 2
Author(s): Weverton Gomes da Costa, Ivan de Paiva Barbosa, Jacqueline Enequio de Souza, Cosme Damião Cruz, Moysés Nascimento, A. C. B. de Oliveira
Software Mentions: 5
Published: over 3 years ago

10.3389/fpls.2021.706822

Influence of the Environment on the Distribution and Quality of Gentiana dahurica Fisch.
Cited by: 8
Author(s): Mingxu Zhang, Dong Jiang, Min Yang, Tian Ma, Fang Ding, Mengmeng Hao, Yuan Chen, Chunhong Zhang, Xiao-Bo Zhang, Min-Hui Li
Software Mentions: 5
Published: over 2 years ago