Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12967-017-1285-6

https://doi.org/10.1186/s12967-017-1285-6

In silico prediction of novel therapeutic targets using gene–disease association data

Cited by: 79
Author(s): Enrico Ferrero, Ian Dunham, Philippe Sanséau
Published: over 7 years ago

Software Mentions 12

bioconductor: biomaRt

Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446

cran: e1071

Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419

cran: gbm

Generalized Boosted Regression Models
Papers that mentioned: 250

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: jsonlite

A Simple and Robust JSON Parser and Generator for R
Papers that mentioned: 36

cran: mlr

Machine Learning in R
Papers that mentioned: 64

cran: nnet

Feed-Forward Neural Networks and Multinomial Log-Linear Models
Papers that mentioned: 296

cran: randomForest

Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447

cran: rpart

Recursive Partitioning and Regression Trees
Papers that mentioned: 431

cran: Rtsne

T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255

pypi: gbm

Read and analyze GBM data
Papers that mentioned: 250

pypi: mlr

Linear regression utility with inference tests, residual analysis, outlier visualization, multicollinearity test, and other features
Papers that mentioned: 64