Ecosyste.ms: Papers

10.22038/AJP.2020.17281

New mechanistic insights into hepatoprotective activity of milk thistle and chicory quantified extract: The role of hepatic Farnesoid-X activated receptors.
Cited by: 5
Author(s): Azadeh Khalili, Parviz Fallah, Seyed Ali Hashemi, Mohammad Mahdi Ahmadian-Attari, Vahid Jamshidi, Roham Mazloom, Leila Beikzadeh, Gholamreza Bayat
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2105-8-401

The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases
Cited by: 117
Author(s): Richard G. Côté, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob
Software Mentions: 1
Published: about 17 years ago

10.1186/1471-2105-12-143

DAS Writeback: A Collaborative Annotation System
Cited by: 5
Author(s): Gustavo Salazar, Rafael C. Jiménez, Alexander García, Henning Hermjakob, Nicola Mulder, Edwin Blake
Software Mentions: 1
Published: over 13 years ago

10.1186/s12859-019-3272-9

DTA-SiST: de novo transcriptome assembly by using simplified suffix trees
Cited by: 3
Author(s): Jin Zhao, Feng Hu, Daming Zhu, Chi Zhang, Ying Xu
Software Mentions: 1
Published: almost 5 years ago

10.1186/1471-2105-10-279

XMPP for cloud computing in bioinformatics supporting discovery and invocation of asynchronous web services
Cited by: 47
Author(s): Johannes Wagener, Ola Spjuth, Egon Willighagen, Jarl E. S. Wikberg
Software Mentions: 1
Published: about 15 years ago

10.1186/s12859-017-1688-7

quantGenius: implementation of a decision support system for qPCR-based gene quantification
Cited by: 35
Author(s): Špela Baebler, Miha Svalina, Marko Petek, Katja Stare, Ana Rotter, Maruša Pompe-Novak, Kristina Gruden
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2105-11-386

Efficiency clustering for low-density microarrays and its application to QPCR
Cited by: 10
Author(s): Eric F. Lock, Ryan Ziemiecki, J. S. Marron, Dirk P. Dittmer
Software Mentions: 1
Published: over 14 years ago

10.1186/1741-7007-8-156

Leaf-cutting ant fungi produce cell wall degrading pectinase complexes reminiscent of phytopathogenic fungi
Cited by: 72
Author(s): Morten Schiøtt, Adelina Rogowska-Wrzesińska, Peter Roepstorff, Jacobus J. Boomsma
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2407-9-134

Clinical significance of Neutrophil gelatinase-associated lipocalin(NGAL) expression in primary rectal cancer
Cited by: 35
Author(s): Xiufeng Zhang, Ying Zhang, Xiaohua Zhang, Sumei Zhou, Guangli Yang, Ouchen Wang, Gui-Long Guo, Gaoyi Yang, Xiaoqu Hu
Software Mentions: 1
Published: over 15 years ago

10.1186/s12885-015-1022-6

Dermcidin exerts its oncogenic effects in breast cancer via modulation of ERBB signaling
Cited by: 18
Author(s): Jasna Bancovik, Dayson Moreira, Daniel R. Carrasco, Jun Yao, Dale Porter, Ricardo Olímpio de Moura, Anamaria A. Camargo, Cibely C. Fontes-Oliveira, Miguel G. Malpartida, Silvia Carambula, Edouard Vannier, Bryan E. Strauss, Alda Wakamatsu, Venâncio Avancini Ferreira Alves, Ângela Flávia Logullo, Fernando Augusto Soares, Kornélia Polyák, José Ernesto Belizário
Software Mentions: 1
Published: almost 10 years ago

10.1186/1471-2407-14-694

HMGA1 and HMGA2 expression and comparative analyses of HMGA2, Lin28and let-7 miRNAs in oral squamous cell carcinoma
Cited by: 26
Author(s): Katharina A Sterenczak, A. Eckardt, Andreas Kampmann, Saskia Willenbrock, N. Eberle, Florian Länger, Sven Kleinschmidt, M. Hewicker‐Trautwein, Hans Kreipe, Ingo Nolte, Hugo Murua Escobar, N.‐C. Gellrich
Software Mentions: 1
Published: about 10 years ago

10.1186/1471-2407-13-507

SORBS2 and TLR3 induce premature senescence in primary human fibroblasts and keratinocytes
Cited by: 11
Author(s): Melanie Liesenfeld, Alexander S. Mosig, Harald Funke, Lars Jansen, Ingo B. Runnebaum, Matthias Dürst, Claudia Backsch
Software Mentions: 1
Published: about 11 years ago

10.1186/1471-2121-11-95

Maintaining RNA integrity in a homogeneous population of mammary epithelial cells isolated by Laser Capture Microdissection
Cited by: 46
Author(s): Claudia Bevilacqua, Samira Makhzami, Jean‐Christophe Helbling, Pierre Defrenaix, Patrice Martin
Software Mentions: 1
Published: almost 14 years ago

10.1186/s12906-015-0881-3

Acupuncture at KI3 in healthy volunteers induces specific cortical functional activity: an fMRI study
Cited by: 22
Author(s): Bo Zhu, Yanjie Wang, Guifeng Zhang, Huailiang Ouyang, Jiping Zhang, Yu Zheng, Shaoqun Zhang, Chunxiao Wu, Shanshan Qu, Junqi Chen, Yong Huang, Changyuan Tang
Software Mentions: 1
Published: about 9 years ago

10.1186/1472-6882-7-43

Wellness through a comprehensive Yogic breathing program – A controlled pilot trial
Cited by: 111
Author(s): Anette Kjellgren, Sven Åke Bood, Kajsa Axelsson, Torsten Norlander, Fahri Saatcioglu
Software Mentions: 1
Published: almost 17 years ago

10.1186/1472-6882-14-417

Beneficial effects of treatment with sensory isolation in flotation-tank as a preventive health-care intervention – a randomized controlled pilot trial
Cited by: 25
Author(s): Anette Kjellgren, Jessica Westman
Software Mentions: 1
Published: about 10 years ago

10.1186/s12906-016-1089-x

Promising effects of treatment with flotation-REST (restricted environmental stimulation technique) as an intervention for generalized anxiety disorder (GAD): a randomized controlled pilot trial
Cited by: 20
Author(s): Kristoffer Jonsson, Anette Kjellgren
Software Mentions: 1
Published: over 8 years ago

10.1186/s12906-016-1359-7

Effect of the herbal mixture composed of Aloe Vera, Henna, Adiantum capillus-veneris, and Myrrha on wound healing in streptozotocin-induced diabetic rats
Cited by: 24
Author(s): Hamid Galehdari, Samira Negahdari, Mahnaz Kesmati, Annahita Rezaie, Gholamreza Shariati
Software Mentions: 1
Published: about 8 years ago

10.1186/s12906-020-02969-6

Effectiveness and cerebral responses of multi-points acupuncture for primary insomnia: a preliminary randomized clinical trial and fMRI study
Cited by: 15
Author(s): Yukai Wang, Tie Li, Lijuan Ha, Zhongwen Lv, Fuchun Wang, Zhihong Wang, Jing Mang, Zhongxin Xu
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-5945-7-3

Association of toll-interacting protein gene polymorphisms with atopic dermatitis
Cited by: 32
Author(s): Tobias Schimming, Qumar Parwez, Elisabeth Petrasch‐Parwez, Michael Nothnagel, Jörg T. Epplen, Sabine Hoffjan
Software Mentions: 1
Published: over 17 years ago

10.1186/1471-213X-11-7

Coordinated gene expression during gilthead sea bream skeletogenesis and its disruption by nutritional hypervitaminosis A
Cited by: 41
Author(s): Ignacio Fernández, María J. Darias, Karl B. Andrée, David Mazurais, José‐Luis Zambonino-Infante, Enric Gisbert
Software Mentions: 1
Published: almost 14 years ago

10.1186/1472-6785-13-21

Ecological comparison of cellular stress responses among populations – normalizing RT-qPCR values to investigate differential environmental adaptations
Cited by: 9
Author(s): Stefan Koenigstein, Kevin Pöhlmann, Christoph Held, Doris Abele
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12862-014-0191-2

Identification of differentially expressed genes in female Drosophila antonietae and Drosophila meridionalisin response to host cactus odor
Cited by: 6
Author(s): Camila M Borgonove, Carla B Cavallari, Mateus Henrique Santos, Rafaela Rossetti, Klaus Hartfelder, Maura Helena Manfrin
Software Mentions: 1
Published: about 10 years ago

10.1186/1471-2148-13-159

A novel type of light-harvesting antenna protein of red algal origin in algae with secondary plastids
Cited by: 28
Author(s): Sabine Sturm, Johannes Engelken, Ansgar Gruber, Sascha Vugrinec, Peter G. Kroth, Iwona Adamska, Johann Lavaud
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2148-13-49

Convergent evolution of heat-inducibility during subfunctionalization of the Hsp70 gene family
Cited by: 27
Author(s): Sascha Krenek, Martin Schlegel, Thomas U. Berendonk
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2148-10-273

Suppression subtractive hybridization analysis reveals expression of conserved and novel genes in male accessory glands of the ant Leptothorax gredleri
Cited by: 6
Author(s): Angelika Oppelt, Fernanda C. Humann, Marion Fuessl, Sergio Vicente de Azevedo, David Santos Marco Antônio, Jürgen Heınze, Klaus Hartfelder
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12862-015-0326-0

Transcriptomic characterization of the enzymatic antioxidants FeSOD, MnSOD, APX and KatG in the dinoflagellate genus Symbiodinium
Cited by: 47
Author(s): Thomas Krueger, Paul L. Fisher, Susanne Becker, Stefanie Pontasch, Sophie Dove, Ove Hoegh‐Guldberg, William Leggat, Simon K. Davy
Software Mentions: 1
Published: over 9 years ago

10.1186/s12863-020-0834-9

Genetic and genomic characterization of vulva size traits in Yorkshire and Landrace gilts
Cited by: 3
Author(s): Flor-Anita Corredor, Letícia P Sanglard, Richard J. Leach, Jason W. Ross, Aileen F. Keating, Nick V. L. Serão
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2164-15-1030

Transcriptome analysis during berry development provides insights into co-regulated and altered gene expression between a seeded wine grape variety and its seedless somatic variant
Cited by: 28
Author(s): Chinedu Charles Nwafor, Ivana Gribaudo, Anna Schneider, Ron Wehrens, S. Grando, L. Costantini
Software Mentions: 1
Published: almost 10 years ago

10.1186/1471-2164-15-425

Crossroads between light response and nutrient signalling: ENV1 and PhLP1 act as mutual regulatory pair in Trichoderma reesei
Cited by: 35
Author(s): Doris Tisch, André Schuster, Monika Schmoll
Software Mentions: 1
Published: over 10 years ago

10.1186/s12864-017-4299-9

RNA-seq and Tn-seq reveal fitness determinants of vancomycin-resistant Enterococcus faecium during growth in human serum
Cited by: 38
Author(s): Xinglin Zhang, Vincent de Maat, Ana M. Guzmán Prieto, Tomasz K. Prajsnar, Jumamurat R. Bayjanov, Mark de Been, Malbert R. C. Rogers, Marc J. M. Bonten, Michael P. Williamson, Rob J. L. Willems, Willem van Schaik
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-9-283

Phenotypic and genetic characterization of a novel phenotype in pigs characterized by juvenile hairlessness and age dependent emphysema
Cited by: 6
Author(s): Camilla S. Bruun, Claus B. Jørgensen, Lene Bay, Susanna Cirera, Henrik Elvang Jensen, Páll S. Leifsson, Jens Peter Nielsen, K. Christensen, Merete Fredholm
Software Mentions: 1
Published: over 16 years ago

10.1186/1471-2164-14-133

Pathway-focused bioassays and transcriptome analysis contribute to a better activity monitoring of complex herbal remedies
Cited by: 18
Author(s): Angela L. Klein, Oliver A. Wrulich, M Jenny, Peter J. Gruber, Kathrin Becker, Dietmar Fuchs, Johanna M. Gostner, Florian Überall
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2164-13-386

MicroRNAs in metamorphic and non-metamorphic transitions in hemimetabolan insect metamorphosis
Cited by: 41
Author(s): Mercedes Rubio, Anibal de Horna, Xavier Bellés
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-11-22

Acetylation of p65 at lysine 314 is important for late NF-κB-dependent gene expression
Cited by: 72
Author(s): Karin Rothgiesser, Monika Fey, Michael O. Hottiger
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2164-14-577

Genome-wide analysis of the Hsp 20 gene family in soybean: comprehensive sequence, genomic organization and expression profile analysis under abiotic and biotic stresses
Cited by: 114
Author(s): Valéria Stefania Lopes-Caitar, M. C. C. G. de Carvalho, Luana Mieko Darben, Marcia Kamogae Kuwahara, Alexandre Lima Nepomuceno, W. P. Dias, R. V. Abdelnoor, Francismar Corrêa Marcelino-Guimarães
Software Mentions: 1
Published: about 11 years ago

10.1186/1471-2164-10-183

Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis
Cited by: 12
Author(s): Alper Uzun, Nélida Rodríguez-Osorio, Abdullah Kaya, Hongfeng Wang, J.J. Parrish, Valentin A. Ilyin, Erdoğan Memili
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2164-14-348

Behavioral and neurogenomic transcriptome changes in wild-derived zebrafish with fluoxetine treatment
Cited by: 107
Author(s): Ryan Y. Wong, Sarah E. Oxendine, John Godwin
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12864-018-5237-1

Gene ontology analysis of expanded porcine blastocysts from gilts fed organic or inorganic selenium combined with pyridoxine
Cited by: 7
Author(s): Danyel Bueno Dalto, Stephen Tsoi, Michael K. Dyck, J. J. Matte
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2164-13-615

Transcriptome analysis of the spalax hypoxia survival response includes suppression of apoptosis and tight control of angiogenesis
Cited by: 29
Author(s): Assaf Malik, Abraham B. Korol, Mathias Weber, Thomas Hankeln, Aaron Avivi, Mark Band
Software Mentions: 1
Published: about 12 years ago

10.1186/1471-2164-14-235

Tyrosine pathway regulation is host-mediated in the pea aphid symbiosis during late embryonic and early larval development
Cited by: 37
Author(s): Andréane Rabatel, Gérard Febvay, Karen Gaget, G. Duport, Patrice Bâa-Puyoulet, Panagiotis Sapountzis, Nadia Bendridi, Marjolaine Rey, Yvan Rahbé, Hubert Charles, Federica Calevro, Stefano Colella
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2164-13-410

Hepatic transcriptome analysis of inter-family variability in flesh n-3 long-chain polyunsaturated fatty acid content in Atlantic salmon
Cited by: 32
Author(s): Sofía Morais, John B. Taggart, D. R. Guy, J. Gordon Bell, Douglas R. Tocher
Software Mentions: 1
Published: almost 13 years ago

10.1186/1471-2164-12-195

Interactions of a pesticide/heavy metal mixture in marine bivalves: a transcriptomic assessment
Cited by: 87
Author(s): Francesco Dondero, Mohamed Bannı, Alessandro Negri, Lara Boatti, A. Dagnino, Aldo Viarengo
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2164-8-147

Global gene expression profiling in human lung cells exposed to cobalt
Cited by: 38
Author(s): Véronique Malard, Frédéric Bérenguer, Odette Prat, Sylvie Ruat, Gérard Steinmetz, Éric Quéméneur
Software Mentions: 1
Published: almost 18 years ago

10.1186/s12864-015-1738-3

Use of the de novo transcriptome analysis of silver-leaf nightshade (Solanum elaeagnifolium) to identify gene expression changes associated with wounding and terpene biosynthesis
Cited by: 23
Author(s): Aphrodite Tsaballa, Alexandros K. Nikolaidis, Foteini Trikka, Codruţa Ignea, Sotirios C. Kampranis, Antonios M. Makris, Anagnostis Argiriou
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-021-07527-z

A highly mutable GST is essential for bract colouration in Euphorbia pulcherrima Willd. Ex Klotsch
Cited by: 12
Author(s): Vinicius Vilperte, Robert Boehm, Thomas Debener
Software Mentions: 1
Published: over 3 years ago

10.1186/s12864-016-3270-5

Leaf transcriptome of two highly divergent genotypes of Urochloa humidicola (Poaceae), a tropical polyploid forage grass adapted to acidic soils and temporary flooding areas
Cited by: 14
Author(s): B. B. Z. Vigna, Fernanda Ancelmo de Oliveira, Guilherme Toledo-Silva, Carla Cristina da Silva, Cacilda Borges do Valle, Anete Pereira de Souza
Software Mentions: 1
Published: about 8 years ago

10.1186/1471-2164-12-255

Genotype-specific responses in Atlantic salmon (Salmo salar) subject to dietary fish oil replacement by vegetable oil: a liver transcriptomic analysis
Cited by: 148
Author(s): Sofía Morais, Jarunan Pratoomyot, John B. Taggart, James E. Bron, D. R. Guy, J. Gordon Bell, Douglas R. Tocher
Software Mentions: 1
Published: over 13 years ago

10.1186/s12864-018-4642-9

Transcriptome analysis of granulosa cells after conventional vs long FSH-induced superstimulation in cattle
Cited by: 20
Author(s): F. C. F. Dias, M. Islam Khan, Marc‐André Sirard, Gregg P. Adams, Jaswant Singh
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-14-55

A colorectal cancer genome-wide association study in a Spanish cohort identifies two variants associated with colorectal cancer risk at 1p33 and 8p12
Cited by: 34
Author(s): Ceres Fernández–Rozadilla, Jean‐Baptiste Cazier, Ian Tomlinson, Luis G. Carvajal‐Carmona, Claire Palles, María Jesús Lamas, Montserrat Baiget, Luis Andrés López-Fernández, Alejandro Brea‐Fernández, Anna Abulí, Luís Bujanda, Juan Clofent, Dolors González, Rosa M. Xicola, Montserrat Andreu, Xavier Bessa, Rodrigo Jover, Xavier Llor, Vı́ctor Moreno, Antoni Castells, Ángel Carracedo, Sergi Castellví–Bel, Clara Ruiz–Ponte
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2164-13-669

Comparative genomics and transcriptomics of trait-gene association
Cited by: 16
Author(s): Sebastián Aguilar Pierlé, Michael J. Dark, Dani Dahmen, Guy H. Palmer, Kelly A. Brayton
Software Mentions: 1
Published: almost 13 years ago

10.1186/1471-2164-10-425

Genome-wide analysis of signal peptide functionality in Lactobacillus plantarum WCFS1
Cited by: 87
Author(s): Geir Mathiesen, Anita Sveen, May Bente Brurberg, Lasse Fredriksen, Lars Axelsson, Vincent G. H. Eijsink
Software Mentions: 1
Published: almost 16 years ago

10.1186/s12864-015-1611-4

Microarray transcriptional profiling of Arctic Mesorhizobium strain N33 at low temperature provides insights into cold adaption strategies
Cited by: 36
Author(s): Abdollah-Fardin Ghobakhlou, Anne Johnston, Linda J. Harris, Hani Antoun, Serge Laberge
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2164-12-634

Thyroid hormone-regulated gene expression in juvenile mouse liver: identification of thyroid response elements using microarray profiling and in silico analyses
Cited by: 20
Author(s): Martin Paquette, Hongyan Dong, Remi Gagné, Andrew Williams, Morie Malowany, Michael G. Wade, Carole L. Yauk
Software Mentions: 1
Published: almost 13 years ago

10.1186/1471-2164-14-272

Transcriptional pathways associated with the slow growth phenotype of transformed Anaplasma marginale
Cited by: 13
Author(s): Sebastián Aguilar Pierlé, G. Kenitra Hammac, Guy H. Palmer, Kelly A. Brayton
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2164-10-190

Transcriptional reprogramming of gene expression in bovine somatic cell chromatin transfer embryos
Cited by: 33
Author(s): Nélida Rodríguez-Osorio, Zhongde Wang, Poothappillai Kasinathan, Grier P. Page, James M. Robl, Erdoğan Memili
Software Mentions: 1
Published: over 15 years ago

10.1186/s12864-016-2810-3

RNA sequencing analysis to capture the transcriptome landscape during skin ulceration syndrome progression in sea cucumber Apostichopus japonicus
Cited by: 27
Author(s): Aifu Yang, Zunchun Zhou, Yongjia Pan, Jingwei Jiang, Ying Dong, Xiaoyan Guan, Hongjuan Sun, Shan Gao, Zhong Chen
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2164-14-153

Transcriptional analysis of genes involved in nodulation in soybean roots inoculated with Bradyrhizobium japonicumstrain CPAC 15
Cited by: 23
Author(s): Gesiele Almeida Barros de Carvalho, Jesiane Stefânia Silva Batista, Francismar Corrêa Marcelino-Guimarães, Leandro Costa do Nascimento, Mariángela Hungria
Software Mentions: 1
Published: over 11 years ago

10.1186/s12877-016-0194-5

Cognitive training can reduce the rate of cognitive aging: a neuroimaging cohort study
Cited by: 40
Author(s): Ting Li, Ye Yao, Yan Cheng, Bing Xu, Xinyi Cao, David J. Waxman, Wei Feng, Yuan Shen, Qingwei Li, Jijun Wang, Wei Wu, Chunbo Li, Jianfeng Feng
Software Mentions: 1
Published: almost 9 years ago

10.1186/1471-2172-13-36

Adjuvant effect of docetaxel on the immune responses to influenza A H1N1 vaccine in mice
Cited by: 24
Author(s): Jian Chen, Yuan Lin, Qing Fan, Fei Su, Yu Chen, Songhua Hu
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2172-10-63

Variable expression of cysteinyl leukotriene type I receptor splice variants in asthmatic females with different promoter haplotypes
Cited by: 9
Author(s): Milena Sokołowska, Karolina Wódz-Naśkiewicz, M Cieślak, Karolina Seta, Andrzej K. Bednarek, Rafał Pawliczak
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2334-7-136

Differential expression of viral PAMP receptors mRNA in peripheral blood of patients with chronic hepatitis C infection
Cited by: 17
Author(s): R Atencia, Francisco Javier Bustamante, A. Valdivieso, Ana Arrieta, Marta Riñón, Álvaro Prada, Natalia Maruri
Software Mentions: 1
Published: about 17 years ago

10.1186/1741-7015-10-108

Obesity and prostate cancer: gene expression signature of human periprostatic adipose tissue
Cited by: 75
Author(s): Ricardo Ribeiro, Cátia Monteiro, Victoria Catalán, Pingzhao Hu, Virgínia Cunha, Amaia Rodríguez, Javier Gómez-Ambrosi, Avelino Fraga, Paulo Príncipe, Carlos Lobato, Francisco Lobo, António Morais, Vítor Silva, José Sanches-Magalhães, Jorge Oliveira, Francisco Pina, Cláudia B. Lopes, Rui Medeiros, Gema Frühbeck
Software Mentions: 1
Published: about 12 years ago

10.1186/1755-8794-1-30

Gene expression in periodontal tissues following treatment
Cited by: 60
Author(s): Thomas Beikler, Ulrike Peters, Karola Prior, Martin Eisenacher, Thomas Frank Flemmig
Software Mentions: 1
Published: over 16 years ago

10.1186/1755-8794-6-26

Microarray characterization of gene expression changes in blood during acute ethanol exposure
Cited by: 14
Author(s): Doris M. Kupfer, Vicky L. White, David L. Strayer, Dennis J. Crouch, Dennis Burian
Software Mentions: 1
Published: over 11 years ago

10.1186/s12880-020-00541-9

Intrinsic brain abnormalities of irritable bowel syndrome with diarrhea: a preliminary resting-state functional magnetic resonance imaging study
Cited by: 6
Author(s): Weiqun Ao, Yougen Cheng, Mingxian Chen, Fuquan Wei, Guoren Yang, Yongyu An, Mingxia Fan, Xifang Zhu, Guoqun Mao
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12880-016-0152-x

Multimodal MRI for early diabetic mild cognitive impairment: study protocol of a prospective diagnostic trial
Cited by: 4
Author(s): Ying Yu, Qian Sun, Lin‐Feng Yan, Yu-Chuan Hu, Hai-Yan Nan, Yang Yang, Zhicheng Liu, Wen Wang, Guangbin Cui
Software Mentions: 1
Published: over 8 years ago

10.1186/s12880-018-0272-6

Structural and functional brain changes in perimenopausal women who are susceptible to migraine: a study protocol of multi-modal MRI trial
Cited by: 4
Author(s): Bo Hu, Xu Wang, Jiebing He, Yujie Dai, Jin Zhang, Ying Yu, Qian Sun, Lin-FengYan, Yu-Chuan Hu, Hai-Yan Nan, Yang Yang, Alan D. Kaye, Guangbin Cui, Wen Wang
Software Mentions: 1
Published: about 6 years ago

10.1186/s12911-019-0949-y

Establishing spatially-enabled health registry systems using implicit spatial data pools: case study – Uganda
Cited by: 0
Author(s): Augustus Aturinde, Rose Nakasi, Mahdi Farnaghi, Gilbert Maiga, Petter Pilesjö, Ali Mansourian
Software Mentions: 1
Published: about 5 years ago

10.1186/s12866-021-02310-2

Effect of drops containing Lactobacillus reuteri (DSM 17938 and ATCC PTA 5289) on plaque acidogenicity and other caries-related variables in orthodontic patients
Cited by: 4
Author(s): Sahal Alforaidi, Andrea Bresin, Naif Almosa, Anna Lehrkinder, Peter Lingström
Software Mentions: 1
Published: about 3 years ago

10.1186/1471-2180-13-108

Comparative analysis of the repertoire of G protein-coupled receptors of three species of the fungal genus Trichoderma
Cited by: 37
Author(s): Sabine Gruber, Markus Omann, Susanne Zeilinger
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2180-9-183

Role of the ArcAB two-component system in the resistance of Escherichia colito reactive oxygen stress
Cited by: 67
Author(s): Cindy Loui, Alexander Chang, Sangwei Lu
Software Mentions: 1
Published: about 15 years ago

10.1186/s12866-014-0333-0

Sm2, a paralog of the Trichoderma cerato-platanin elicitor Sm1, is also highly important for plant protection conferred by the fungal-root interaction of Trichoderma with maize
Cited by: 64
Author(s): Romana Gaderer, Netta Li Lamdan, Alexa Frischmann, Michael Sulyok, Rudolf Krska, Benjamin A. Horwitz, Verena Seidl‐Seiboth
Software Mentions: 1
Published: almost 10 years ago

10.1186/1471-2180-12-284

Putative SF2 helicases of the early-branching eukaryote Giardia lamblia are involved in antigenic variation and parasite differentiation into cysts
Cited by: 8
Author(s): Pablo Rubén Gargantini, Marianela C. Serradell, Alessandro Torri, Hugo D. Luján
Software Mentions: 1
Published: almost 13 years ago

10.1186/1471-2180-5-64

The gene for a lectin-like protein is transcriptionally activated during sexual development, but is not essential for fruiting body formation in the filamentous fungus Sordaria macrospora
Cited by: 60
Author(s): Minou Nowrousian, Patricia Cebula
Software Mentions: 1
Published: about 19 years ago

10.1186/1471-2180-12-116

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates
Cited by: 133
Author(s): Bin Fan, Lília C. Carvalhais, Anke Becker, Dmitri Fedoseyenko, Nicolaus von Wirén, Rainer Borriss
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2180-8-124

Differential expression of lipoprotein genes in Mycoplasma pneumoniae after contact with human lung epithelial cells, and under oxidative and acidic stress
Cited by: 23
Author(s): Katri Hallamaa, Sen‐Lin Tang, Nino Ficorilli, Glenn F. Browning
Software Mentions: 1
Published: almost 17 years ago

10.1186/1471-2199-11-75

The use of reference gene selection programs to study the silvering transformation in a freshwater eel Anguilla australis: a cautionary tale
Cited by: 41
Author(s): Alvin N. Setiawan, P. Mark Lokman
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2199-12-7

Assessment and validation of a suite of reverse transcription-quantitative PCR reference genes for analyses of density-dependent behavioural plasticity in the Australian plague locust
Cited by: 61
Author(s): Marie Pierre Chapuis, Donya Tohidi-Esfahani, Tim Dodgson, Laurence Blondin, Fleur Ponton, Darron A. Cullen, Stephen J. Simpson, Gregory A. Sword
Software Mentions: 1
Published: almost 14 years ago

10.1186/s12867-018-0119-2

Graphene oxide down-regulates genes of the oxidative phosphorylation complexes in a glioblastoma
Cited by: 16
Author(s): Maciej Szmidt, Adrian Stankiewicz, Kaja Urbańska, Sławomir Jaworski, Marta Kutwin, Mateusz Wierzbicki, Marta Grodzik, Beata Burzyńska, Monika Góra, A. Chwalibog, Ewa Sawosz
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2199-11-50

Predator-induced defences in Daphnia pulex: Selection and evaluation of internal reference genes for gene expression studies with real-time PCR
Cited by: 55
Author(s): Katina I. Spanier, Florian Leese, Christoph Mayer, John K. Colbourne, Don Gilbert, Michael E. Pfrender, Ralph Tollrian
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2199-11-100

qPCR in gastrointestinal stromal tumors: Evaluation of reference genes and expression analysis of KIT and the alternative receptor tyrosine kinases FLT3, CSF1-R, PDGFRB, MET and AXL
Cited by: 9
Author(s): Jana Fassunke, Marie-Christine Blum, Hans‐Ulrich Schildhaus, Marc Zapatka, Benedikt Brors, Helen Künstlinger, Reinhard Büttner, Eva Wardelmann, Sabine Merkelbach‐Bruse
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2474-12-283

mtDNA haplogroup J Modulates telomere length and Nitric Oxide production
Cited by: 33
Author(s): M. Fernández-Moreno, María Tamayo, Angel Soto‐Hermida, Alejandro Mosquera, N. Oreiro, C. Fernández-López, José Luis Fernández Fernández, Ignacio Rego‐Pérez, Francisco J. Blanco
Software Mentions: 1
Published: almost 13 years ago

10.1186/s12883-015-0514-y

Using network dynamic fMRI for detection of epileptogenic foci
Cited by: 20
Author(s): Sanja Nedic, Steven M. Stufflebeam, Carlo Rondinoni, Tonicarlo Rodrigues Velasco, Antônio Carlos dos Santos, João Pereira Leite, Ana Carolina Gárgaro, Lilianne R. Mujica‐Parodi, Jaime S. Ide
Software Mentions: 1
Published: almost 9 years ago

10.1186/1471-2377-11-28

Algorithms for the diagnosis and treatment of restless legs syndrome in primary care
Cited by: 107
Author(s): Diego Garcı́a-Borreguero, Paul R. Stillman, Heike Beneš, Heiner Buschmann, K. Ray Chaudhuri, Victor M Gonzalez Rodríguez, Birgit Högl, Ralf Kohnen, Giorgio Monti, Karin Stiasny‐Kolster, Claudia Trenkwalder, Anne-Marie Williams, Marco Zucconi
Software Mentions: 1
Published: over 13 years ago

10.1186/s12883-021-02079-x

Abnormal regional homogeneity and its relationship with symptom severity in cervical dystonia: a rest state fMRI study
Cited by: 4
Author(s): Shubao Wei, Chunhui Lu, Xiuqiong Chen, Lu Yang, Jing Wei, Wenyan Jiang, Yang Liu, Huihui Li, Yuhong Qin, Yiwu Lei, Chao Qin, Caiyou Hu, Shuguang Luo
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12868-015-0224-9

The anterior insula and anterior cingulate cortex are associated with avoidance of dental treatment based on prior experience of treatment in healthy adults
Cited by: 6
Author(s): Cheng‐Jian Lin, Shih Yun Wu, Long Ting Wu
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12868-019-0548-y

Altered functional connectivity of the nucleus accumbens subdivisions in amphetamine-type stimulant abusers: a resting-state fMRI study
Cited by: 9
Author(s): Yun Wang, Kai-Juan Yan, Chen-Xiao Fan, Xi Luo, Yuan Zhou
Software Mentions: 1
Published: almost 5 years ago

10.1186/1471-2202-13-119

Functional connectivity profile of the human inferior frontal junction: involvement in a cognitive control network
Cited by: 55
Author(s): Benedikt Sundermann, Bettina Pfleiderer
Software Mentions: 1
Published: about 12 years ago

10.1186/s12868-021-00617-4

Neural basis underlying the trait of attachment anxiety and avoidance revealed by the amplitude of low-frequency fluctuations and resting-state functional connectivity
Cited by: 5
Author(s): Min Deng, Xing Zhang, Xiao-Yan Bi, Chunhai Gao
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2202-10-19

Effects of dietary Na+ deprivation on epithelial Na+ channel (ENaC), BDNF, and TrkB mRNA expression in the rat tongue
Cited by: 12
Author(s): Tao Huang, Frauke Stähler
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2431-10-42

Robustness of the healthcare utilization results from the Rotavirus Efficacy and Safety Trial (REST) evaluating the human-bovine (WC3) reassortant pentavalent rotavirus vaccine (RV5)
Cited by: 10
Author(s): Robbin Itzler, Gary G. Koch, David O. Matson, Leif Gothefors, Pierre Van Damme, Mark J. DiNubile, Penny M. Heaton
Software Mentions: 1
Published: over 14 years ago

10.1186/1471-2210-11-10

Protection of protease-activated receptor 2 mediated vasodilatation against angiotensin II-induced vascular dysfunction in mice
Cited by: 17
Author(s): Elizabeth W. Chia, Satomi Kagota, Enoka P. Wijekoon, John J. McGuire
Software Mentions: 1
Published: about 13 years ago

10.1186/1471-2210-10-15

Pharmacokinetic and pharmacodynamic comparison of two "pegylated" interferon alpha-2 formulations in healthy male volunteers: a randomized, crossover, double-blind study
Cited by: 29
Author(s): Idrian García-García, Carlos A. González-Delgado, Carmen Valenzuela-Silva, Alina Díaz-Machado, Marisol Cruz-Díaz, Hugo Nodarse-Cuní, Orlando Pérez-Pérez, Cimara H Bermúdez-Badell, Joel Ferrero-Bibilonia, Rolando Páez-Meireles, Iraldo Bello-Rivero, Fidel R Castro-Odio, Pedro López-Saura
Software Mentions: 1
Published: about 14 years ago

10.1186/1472-6793-10-12

Molecular pathology of vertebral deformities in hyperthermic Atlantic salmon (Salmo salar)
Cited by: 80
Author(s): Elisabeth Ytteborg, Grete Bæverfjord, Jacob Torgersen, Kirsti Hjelde, Harald Takle
Software Mentions: 1
Published: over 14 years ago

10.1186/s12870-020-02736-2

The soybean gene GmHsp22.4 is involved in the resistance response to Meloidogyne javanica in Arabidopsis thaliana
Cited by: 6
Author(s): Suellen Mika Hishinuma-Silva, Valéria Stefania Lopes-Caitar, Rafael Bruno Guayato Nomura, Bruna Caroline Sercero, Aline Garcia da Silva, Mayra Costa da Cruz Gallo de Carvalho, I. de O. N. Lopes, W. P. Dias, Francismar Corrêa Marcelino-Guimarães
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12870-015-0597-z

Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance
Cited by: 101
Author(s): Fabrício Barbosa Monteiro Arraes, Magda Aparecida Beneventi, Maria Eugênia Lisei de, Joaquin Felipe Roca Paixão, Érika Valéria Saliba Albuquerque, Silvana Regina Rockenbach Marin, Eduardo Purgatto, Alexandre Lima Nepomuceno, Maria Fátima Grossi‐de‐Sá
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-2229-14-42

Sodium hydrosulfide induces systemic thermotolerance to strawberry plants through transcriptional regulation of heat shock proteins and aquaporin
Cited by: 139
Author(s): Anastasis Christou, Panagiota Filippou, George A. Manganaris, Vasileios Fotopoulos
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12870-016-0791-7

Tolerance of citrus plants to the combination of high temperatures and drought is associated to the increase in transpiration modulated by a reduction in abscisic acid levels
Cited by: 158
Author(s): Sara I. Zandalinas, Rosa M. Rivero, Vicente Martı́nez, Aurelio Gómez‐Cadenas
Software Mentions: 1
Published: over 8 years ago

10.1186/s12870-019-1954-0

Transcriptome sequencing, de novo assembly, characterisation of wild accession of blackgram (Vigna mungo var. silvestris) as a rich resource for development of molecular markers and validation of SNPs by high resolution melting (HRM) analysis
Cited by: 20
Author(s): Avi Raizada, J. Souframanien
Software Mentions: 1
Published: over 5 years ago