Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: REST

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/REST

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Papers Mentioning REST 1,757

10.1590/0074-02760170332
Complement system contributes to modulate the infectivity of susceptible TcI strains of Trypanosoma cruzi
Cited by: 10
Author(s): Ruben D. Arroyo-Olarte, Ignacio Martı́nez, Mayra Cruz-Rivera, Fela Mendlovic, Bertha Espinoza
Software Mentions: 1
Published: about 6 years ago
10.4103/0973-1229.77424
A journey into chaos: Creativity and the unconsciousFNx08
Cited by: 41
Author(s): Nancy C. Andreasen
Software Mentions: 1
Published: over 13 years ago
10.1007/s11011-016-9946-3
Frequency-dependent changes in the amplitude of low-frequency fluctuations in patients with Wilson’s disease: a resting-state fMRI study
Cited by: 15
Author(s): Xiaopeng Hu, Siyi Chen, Chang-Bing Huang, Yinfeng Qian, Yongqiang Yu
Software Mentions: 1
Published: over 7 years ago
10.1007/s11011-021-00719-2
The functions of repressor element 1-silencing transcription factor in models of epileptogenesis and post-ischemia
Cited by: 1
Author(s): Ruth Butler-Ryan, Ian C. Wood
Software Mentions: 1
Published: about 3 years ago
10.1111/1751-7915.12104
Transcriptional profile of <scp> <i>S</i> </scp> <i>almonella enterica</i> subsp. <i>enterica</i> serovar <scp>W</scp> eltevreden during alfalfa sprout colonization
Cited by: 19
Author(s): Kerstin Brankatschk, Tim Kamber, Joël F. Pothier, Brion Duffy, Theo H. M. Smits
Software Mentions: 1
Published: over 10 years ago
10.1186/s12934-020-01404-2
The length of ribosomal binding site spacer sequence controls the production yield for intracellular and secreted proteins by Bacillus subtilis
Cited by: 15
Author(s): Kristina Volkenborn, Laura Kuschmierz, Nuka Ivalu Benz, Patrick Lenz, Andreas Knapp, Karl‐Erich Jaeger
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12934-017-0772-z
Contribution of single amino acid and codon substitutions to the production and secretion of a lipase by Bacillus subtilis
Cited by: 15
Author(s): Pia Skoczinski, Kristina Volkenborn, Alexander Fulton, Anuseema Bhadauriya, Christina Nutschel, Holger Gohlke, A. Merrill Knapp, Karl‐Erich Jaeger
Software Mentions: 1
Published: over 6 years ago
10.1002/mbo3.889
Antioxidation and symbiotic nitrogen fixation function of prxA gene in Mesorhizobium huakuii
Cited by: 2
Author(s): Sanjiao Wang, Tiantian Lu, Xue Qiang, Ke Xu, Guyue Cheng
Software Mentions: 1
Published: almost 5 years ago
10.1002/mbo3.511
Contributions of the oligopeptide permeases in multistep of<i>Vibrio alginolyticus</i>pathogenesis
Cited by: 40
Author(s): Wenjia Liu, Lixing Huang, Yongquan Su, Yingxue Qin, Lingmin Zhao, Qingpi Yan
Software Mentions: 1
Published: almost 7 years ago
10.1099/mic.0.000927
Transcriptional response of Fusarium oxysporum and Neocosmospora solani challenged with amphotericin B or posaconazole
Cited by: 4
Author(s): Adriana Castillo-Castañeda, Silvia J. Cañas-Duarte, Marcela Guevara‐Suarez, Josep Guarro, Silvia Restrepo, Adriana Marcela Celis Ramírez
Software Mentions: 1
Published: over 3 years ago
10.3390/microorganisms8081164
How to RESPOND to Modern Challenges for People Living with HIV: A Profile for a New Cohort Consortium
Cited by: 11
Author(s):
Software Mentions: 1
Published: almost 4 years ago
10.3390/microorganisms8010142
Porcine Colostrum Protects the IPEC-J2 Cells and Piglet Colon Epithelium against Clostridioides (syn. Clostridium) difficile Toxin-Induced Effects
Cited by: 8
Author(s): Łukasz Grześkowiak, Robert Pieper, Susan Kröger, Beatriz Martínez-Vallespín, Anja E. Hauser, Raluca Niesner, Wilfried Vahjen, Jürgen Zentek
Software Mentions: 1
Published: over 4 years ago
10.1093/molbev/msw209
The Evolution of Silicon Transport in Eukaryotes
Cited by: 95
Author(s): Alan O. Marron, Sarah J. Ratcliffe, Glen Wheeler, Raymond E. Goldstein, Nicole King, Fabrice Not, Colomban de Vargas, Daniel J. Richter
Software Mentions: 1
Published: over 7 years ago
10.1007/s11033-016-4088-6
Microarray analysis of differential gene expression profiles in blood cells of naturally BLV-infected and uninfected Holstein–Friesian cows
Cited by: 15
Author(s): Paweł Brym, Stanisław Kamiński
Software Mentions: 1
Published: over 7 years ago
10.22099/mbrc.2021.38845.1566
Cloning and expressing of interleukine 2 in amniotic membrane-derived mesenchymal stem cells, as a potent feeder layer.
Cited by: 0
Author(s): Saeid Anvari, Farshad Foroughi, Mehdi Azad, Amirhosein Maali, Safar Ali Alizadeh, Mohammad Hossein Ahmadi
Software Mentions: 1
Published: almost 3 years ago
10.1186/s13041-018-0398-z
Plasticity changes in forebrain activity and functional connectivity during neuropathic pain development in rats with sciatic spared nerve injury
Cited by: 36
Author(s): Tzu-Hao Harry Chao, Jyh-Horng Chen, Chen‐Tung Yen
Software Mentions: 1
Published: over 5 years ago
10.1186/s12943-015-0398-x
Targeting PBK/TOPK decreases growth and survival of glioma initiating cells in vitro and attenuates tumor growth in vivo
Cited by: 72
Author(s): Mrinal Joel, Awais A. Mughal, Zanina Grieg, Wayne Murrell, Sheryl Palmero, Birthe Mikkelsen, Hege Fjerdingstad, Cecilie Sandberg, Jinan Behnan, Joel C. Glover, Iver A. Langmoen, Biljana Stangeland
Software Mentions: 1
Published: almost 9 years ago
10.1186/1476-4598-9-201
MMP13 mediates cell cycle progression in melanocytes and melanoma cells: in vitro studies of migration and proliferation
Cited by: 50
Author(s): Svenja Meierjohann, Anita Hufnagel, Elisabeth Wende, Markus A. Kleinschmidt, Katarina Wolf, Peter Friedl, Stefan Gaubatz, Manfred Schartl
Software Mentions: 1
Published: over 14 years ago
10.1186/s12943-015-0432-z
Knockdown of NAT12/NAA30 reduces tumorigenic features of glioblastoma-initiating cells
Cited by: 29
Author(s): Awais A. Mughal, Zanina Grieg, Håvard Kjesbu Skjellegrind, Artem Fayzullin, Mustapha Lamkhannat, Mrinal Joel, Mohammed Shakil Ahmed, Wayne Murrell, Einar O. Vik-Mo, Iver A. Langmoen, Biljana Stangeland
Software Mentions: 1
Published: over 8 years ago
10.1186/1476-4598-13-265
Probenecid as a sensitizer of bisphosphonate-mediated effects in breast cancer cells
Cited by: 19
Author(s): Regina Ebert, Jutta Meißner-Weigl, Sabine Zeck, Jorma A. Määttä, Seppo Auriola, Sofia Sousa, Birgit Mentrup, Stephanie Graser, Tilman D. Rachner, Lorenz C. Hofbauer, Franz Jakob
Software Mentions: 1
Published: over 9 years ago
10.3390/molecules21040449
Effects of Phenolic Acids on the Growth and Production of T‐2 and HT‐2 Toxins by Fusarium langsethiae and F. sporotrichioides
Cited by: 41
Author(s): Elena Ferruz, Vessela Atanasova‐Pénichon, Marie‐Noëlle Bonnin‐Verdal, Gisèle Marchegay, Laëtitia Pinson‐Gadais, Christine Ducos, Susana Lorán, Agustín Ariño, Christian Barreau, Florence Richard‐Forget
Software Mentions: 1
Published: about 8 years ago
10.3390/molecules26030615
Anticancer Activity of the Acetylenic Derivative of Betulin Phosphate Involves Induction of Necrotic-Like Death in Breast Cancer Cells In Vitro
Cited by: 5
Author(s): Arkadiusz Orchel, Ewa Chodurek, Marzena Jaworska-Kik, Piotr Paduszyński, Anna Kaps, Elwira Chrobak, Ewa Bębenek, Stanisław Boryczka, Paulina Borkowska, Janusz Kasperczyk
Software Mentions: 1
Published: over 3 years ago
10.3390/molecules201019030
miRNA Stability in Frozen Plasma Samples
Cited by: 83
Author(s): Francesca Balzano, Marta Deiana, Silvia Dei Giudici, Annalisa Oggiano, Angela Baralla, Sara Pasella, Andrea Mannu, Mario Pescatori, Baingio Porcu, Giuseppe Fanciulli, Angelo Zinellu, Ciriaco Carru, Luca Deiana
Software Mentions: 1
Published: over 8 years ago
10.1002/mgg3.1429
Histone deacetylase inhibitors induce medulloblastoma cell death independent of HDACs recruited in REST repression complexes
Cited by: 3
Author(s): Abdulelah Saleh Alshawli, Heiko Wurdak, Ian C. Wood, John E. Ladbury
Software Mentions: 1
Published: almost 4 years ago
10.1007/s00438-016-1232-x
Expression of resistance gene analogs in woodland strawberry (Fragaria vesca) during infection with Phytophthora cactorum
Cited by: 21
Author(s): Xiao‐Ren Chen, May Bente Brurberg, Abdelhameed Elameen, Sonja S. Klemsdal, Inger Martinussen
Software Mentions: 1
Published: almost 8 years ago
10.1111/mmi.13256
The<i>N</i>‐acetylglucosamine catabolic gene cluster in<i>Trichoderma reesei</i>is controlled by the Ndt80‐like transcription factor RON1
Cited by: 32
Author(s): Lisa Kappel, Romana Gaderer, Michel Flipphi, Verena Seidl‐Seiboth
Software Mentions: 1
Published: over 8 years ago
10.1111/j.1365-2958.2010.07065.x
Chemokine-cleaving Streptococcus pyogenes protease SpyCEP is necessary and sufficient for bacterial dissemination within soft tissues and the respiratory tract
Cited by: 72
Author(s): Prathiba Kurupati, Claire E. Turner, Ioanna Tziona, Richard A. Lawrenson, Faraz M. Alam, Mahrokh Nohadani, Gordon Stamp, Annelies S. Zinkernagel, Victor Nizet, Robert J. Edwards, Shiranee Sriskandan
Software Mentions: 1
Published: over 14 years ago
10.1186/1744-8069-4-55
FMRI Connectivity Analysis of Acupuncture Effects on an Amygdala-Associated Brain Network
Cited by: 107
Author(s): Wei Qin, Jie Tian, Lijun Bai, Xiaohong Pan, Lin Yang, Peng Chen, Jianping Dai, Aiming Lin, Baixiao Zhao, Qiyong Gong, Wei Wang, Karen M. von Deneen, Yijun Liu
Software Mentions: 1
Published: over 16 years ago
10.1186/1744-8069-4-51
Quantitative Real-Time PCR Detection of TRPV1–4 Gene Expression in Human Leukocytes from Healthy and Hyposensitive Subjects
Cited by: 66
Author(s): Giacomo Spinsanti, Raffaella Zannolli, Cristina Panti, Ilaria Ceccarelli, Letizia Marsili, Valeria Bachiocco, Francesco Frati, Anna Maria Aloisi
Software Mentions: 1
Published: over 16 years ago
10.1111/mpp.12960
Infection cushions of <i>Fusarium graminearum</i> are fungal arsenals for wheat infection
Cited by: 31
Author(s): Michael Mentges, Anika Glasenapp, Marike Johanne Boenisch, Sascha Malz, Bernard Henrissat, Rasmus John Normand Frandsen, Ulrich Güldener, Martin Münsterkötter, Jörg Bormann, Marc‐Henri Lebrun, Wilhelm Schäfer, Ana Lilia Martínez-Rocha
Software Mentions: 1
Published: almost 4 years ago
10.1080/03009734.2019.1623351
New insights into the roles of the FOXO3 and P27Kip1 genes in signaling pathways
Cited by: 2
Author(s): Sabah Mayahi, Masoud Golalipour, Ahad Yamchi, Gagan Deep Jhingan, Majid Shahbazi
Software Mentions: 1
Published: almost 5 years ago
10.3390/vaccines2020228
Vaccine Adjuvants in Fish Vaccines Make a Difference: Comparing Three Adjuvants (Montanide ISA763A Oil, CpG/Poly I:C Combo and VHSV Glycoprotein) Alone or in Combination Formulated with an Inactivated Whole Salmonid Alphavirus Antigen
Cited by: 41
Author(s): Hanna Leena Thim, Stéphane Villoing, M F McLoughlin, K. E. Christie, Søren Grove, Petter Frost, Jorunn B. Jørgensen
Software Mentions: 1
Published: about 10 years ago
10.1155/2019/8762780
Comparative Evaluation of T-Cell Immune Response to BTV Infection in Sheep Vaccinated with Pentavalent BTV Vaccine When Compared to Un-Vaccinated Animals
Cited by: 6
Author(s): Molalegne Bitew, Chintu Ravishankar, Soumendu Chakravarti, Gaurav Kumar Sharma
Software Mentions: 1
Published: over 4 years ago
10.1186/s13567-016-0362-9
Vaccination against pancreas disease in Atlantic salmon, Salmo salar L., reduces shedding of salmonid alphavirus
Cited by: 13
Author(s): Pål Skjold, Ingunn Sommerset, Petter Frost, Stéphane Villoing
Software Mentions: 1
Published: almost 8 years ago
10.14202/vetworld.2018.1592-1596
Effect of feeding rice based distillers dried grains with solubles and gluten meal on nutrient transporter genes and immunity in broiler chickens
Cited by: 1
Author(s): O.P. Dinani, Pramod K. Tyagi, Asit Baran Mandal, Praveen K. Tyagi, Dukare Sagar Popat, S. P. Tiwari
Software Mentions: 1
Published: over 5 years ago
10.3390/v7112910
Cleavage of the HPV16 Minor Capsid Protein L2 during Virion Morphogenesis Ablates the Requirement for Cellular Furin during De Novo Infection
Cited by: 18
Author(s): Linda Cruz, Jennifer Biryukov, Michael J. Conway, Craig Meyers
Software Mentions: 1
Published: over 8 years ago
10.3390/v8070207
Local Innate Responses to TLR Ligands in the Chicken Trachea
Cited by: 17
Author(s): Neda Barjesteh, Tamiru Negash Alkie, Douglas C. Hodgins, Éva Nagy, Shayan Sharif
Software Mentions: 1
Published: almost 8 years ago
10.3390/v9110336
Antibody Competition Reveals Surface Location of HPV L2 Minor Capsid Protein Residues 17–36
Cited by: 10
Author(s): Stephanie M. Bywaters, Sarah A. Brendle, Kerstin Pino Tossi, Jennifer Biryukov, Craig Meyers, Neil D. Christensen
Software Mentions: 1
Published: over 6 years ago
10.3390/v9110345
Characterization of Ovine A3Z1 Restriction Properties against Small Ruminant Lentiviruses (SRLVs)
Cited by: 4
Author(s): Lorena de Pablo-Maiso, Idoia Glaria, Helena Crespo, Estanislao Nistal-Villán, Valgerður Andrésdóttir, D. de Andrés, B. Amorena, Ramsés Reina
Software Mentions: 1
Published: over 6 years ago
10.3390/v12090965
Changes in MicroRNA Expression during Rabbit Hemorrhagic Disease Virus (RHDV) Infection
Cited by: 4
Author(s): Beata Hukowska-Szematowicz, Agata Maciejak-Jastrzębska, Małgorzata Blatkiewicz, Karolina Maciak, Monika Góra, Joanna Janiszewska, Beata Burzyńska
Software Mentions: 1
Published: over 3 years ago
10.1007/s00436-015-4383-5
Molecular and biochemical characterization of Entamoeba histolytica fructokinase
Cited by: 3
Author(s): Julia Matt, Michael Duchêne
Software Mentions: 1
Published: about 9 years ago
10.1186/s13071-016-1806-9
Increased expression of ATP binding cassette transporter genes following exposure of Haemonchus contortus larvae to a high concentration of monepantel in vitro
Cited by: 16
Author(s): Ali Raza, Neil H. Bagnall, Abdul Jabbar, Steven Kopp, Andrew C. Kotze
Software Mentions: 1
Published: over 7 years ago
10.1186/s13071-016-1638-7
Immunomodulatory effects of tick saliva on dermal cells exposed to Borrelia burgdorferi, the agent of Lyme disease
Cited by: 16
Author(s): Dorothy C. Scholl, Monica E. Embers, John Caskey, Deepak Kaushal, Thomas N. Mather, Wayne R. Buck, Lisa A. Morici, Mario T. Philipp
Software Mentions: 1
Published: almost 8 years ago
10.1186/s13071-016-1661-8
Dynamics of pyrethroid resistance in malaria vectors in southern Benin following a large scale implementation of vector control interventions
Cited by: 38
Author(s): Gildas A. Yahouédo, Sylvie Cornélie, Innocent Djègbé, Justine Ahlonsou, Aboubakar Sidick, Christophe Soares, Martin Akogbéto, Vincent Corbel
Software Mentions: 1
Published: almost 8 years ago
10.1186/s13071-018-3253-2
Rapid multiplex gene expression assays for monitoring metabolic resistance in the major malaria vector Anopheles gambiae
Cited by: 45
Author(s): Konstantinos Mavridis, Nadja Wipf, Sandrine Medves, I. Erquiaga, Pie Müller, John Vontas
Software Mentions: 1
Published: over 5 years ago
10.1186/1756-3305-4-169
Gene expression study using real-time PCR identifies an NTR gene as a major marker of resistance to benznidazole in Trypanosoma cruzi
Cited by: 27
Author(s): Ana María Mejía-Jaramillo, Geysson Javier Fernández, Lina Marcela Hoyos Palacio, Omar Triana-Chávez
Software Mentions: 1
Published: over 12 years ago
10.1186/s13071-021-04691-9
In vitro effects of tropisetron and granisetron against Echinococcus granulosus (s.s.) protoscoleces by involvement of calcineurin and calmodulin
Cited by: 2
Author(s): Mohammad Reza Shiee, Eshrat Beigom Kia, Farzaneh Zahabiun, Mahmood Naderi, Elahe Motevaseli, Shahram Nekoeian, Majid Fasihi Harandi, Ahmad Reza Dehpour
Software Mentions: 1
Published: about 3 years ago
10.1155/2021/8851027
Abnormal Gray Matter Volume and Functional Connectivity in Parkinson’s Disease with Rapid Eye Movement Sleep Behavior Disorder
Cited by: 8
Author(s): Xun Lang, Zhuang Wu, Min Zhong, Bo Shen, Jun Zhu, Yang Pan, Jun Yan, Wenbin Zhang, Pingyi Xu, Chaoyong Xiao, Li Zhang
Software Mentions: 1
Published: about 3 years ago
10.1155/2016/5246021
Altered Spontaneous Brain Activity in Cortical and Subcortical Regions in Parkinson’s Disease
Cited by: 11
Author(s): Jie Xiang, Xiuqin Jia, Huizhuo Li, Jiawei Qin, Peipeng Liang, Kuncheng Li
Software Mentions: 1
Published: over 8 years ago
10.7717/peerj.4538
Electrophysiological evidence for temporal dynamics associated with attentional processing in the zoom lens paradigm
Cited by: 3
Author(s): Qing Zhang, Tengfei Liang, Jiafeng Zhang, Xueying Fu, Jianlin Wu
Software Mentions: 1
Published: about 6 years ago
10.7717/peerj.1710
Ketamine modulates subgenual cingulate connectivity with the memory-related neural circuit—a mechanism of relevance to resistant depression?
Cited by: 32
Author(s): Jing Jun Wong, Owen O’Daly, Mitul A. Mehta, Allan H. Young, James Stone
Software Mentions: 1
Published: over 8 years ago
10.7717/peerj.8904
Transient expression and purification of β-caryophyllene synthase in <i>Nicotiana benthamiana</i> to produce β-caryophyllene in vitro
Cited by: 6
Author(s): Sarala Devi Muthusamy, Ramesh R. Vetukuri, Anneli Lundgren, Suresh Ganji, Lu Zhu, Peter E. Brodelius, Selvaraju Kanagarajan
Software Mentions: 1
Published: about 4 years ago
10.7717/peerj.6697
MicroRNA profiling of mouse liver in response to DENV-1 infection by deep sequencing
Cited by: 6
Author(s): Lian Yih Pong, Sinikka Parkkinen, Amreeta Dhanoa, Han Ming Gan, Chiharu Wickremesinghe, Sharifah Syed Hassan
Software Mentions: 1
Published: about 5 years ago
10.7717/peerj.174
The β-carboline alkaloid harmine inhibits telomerase activity of MCF-7 cells by down-regulating hTERT mRNA expression accompanied by an accelerated senescent phenotype
Cited by: 27
Author(s): Lei Zhao, Michael Wink
Software Mentions: 1
Published: over 10 years ago
10.7717/peerj.11759
Alterations in brain structure and function in patients with osteonecrosis of the femoral head: a multimodal MRI study
Cited by: 2
Author(s): Jie Ma, Jiajia Wu, Xu‐Yun Hua, Mou‐Xiong Zheng, Bei‐Bei Huo, Xiang‐Xin Xing, Sheng-Yi Feng, Bo Li, Jian‐Guang Xu
Software Mentions: 1
Published: over 2 years ago
10.7717/peerj.7957
Allelic variant in SLC6A3 rs393795 affects cerebral regional homogeneity and gait dysfunction in patients with Parkinson’s disease
Cited by: 1
Author(s): Lina Wang, Yongsheng Yuan, Jianwei Wang, Yu‐Ting Shen, Yi Zhi, Junyi Li, Min Wang, Kezhong Zhang
Software Mentions: 1
Published: over 4 years ago