Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: ROC

https://packages.ecosyste.ms/registries/bioconductor.org/packages/ROC

utilities for ROC, with microarray focus
2 versions
Latest release: about 1 year ago
5 dependent packages
229,043 downloads total

Papers Mentioning ROC 123

10.1186/1748-7188-4-7
Ranking differentially expressed genes from Affymetrix gene expression data: methods with reproducibility, sensitivity, and specificity
Cited by: 71
Author(s): Koji Kadota, Yuji Nakai, Kentaro Shimizu
Software Mentions: 13
Published: over 15 years ago
10.1371/journal.pone.0251323
The role of multiple metabolic genes in predicting the overall survival of colorectal cancer: A study based on TCGA and GEO databases
Cited by: 2
Author(s): Weijun Shi, Xincan Li, Shuai Xu, Hexin Wen, Tianwen Chen, Huazhang Wu, Mulin Liu
Software Mentions: 12
Published: over 3 years ago
10.1038/s41598-021-96236-4
A novel prognostic signature of immune-related lncRNA pairs in lung adenocarcinoma
Cited by: 5
Author(s): Yang Liu, Qiuhong Wu, Xuejiao Fan, Wen Li, Yong Li, Hui Zhu, Qinghua Zhou, Jinming Yu
Software Mentions: 10
Published: over 3 years ago
10.1186/s12575-018-0067-8
Silhouette Scores for Arbitrary Defined Groups in Gene Expression Data and Insights into Differential Expression Results
Cited by: 23
Author(s): Shitao Zhao, Jianqiang Sun, Kentaro Shimizu, Koji Kadota
Software Mentions: 10
Published: over 6 years ago
10.3390/cancers13040917
Novel Gene Signatures Predictive of Patient Recurrence-Free Survival and Castration Resistance in Prostate Cancer
Cited by: 18
Author(s): Jun Ai, Baotong Zhang, Zhiqian Zhang, Hailiang Hu, Jiangtao Dong
Software Mentions: 9
Published: almost 4 years ago
10.3389/fonc.2021.698856
A Novel Ferroptosis-Related Gene Model for Overall Survival Predictions of Bladder Urothelial Carcinoma Patients
Cited by: 9
Author(s): Min Zhang, Xin Zhang, Minghang Yu, Wei Zhang, Di Zhang, Song Zeng, Xi Wang, Xiaosong Hu
Software Mentions: 9
Published: over 3 years ago
10.1186/1471-2105-14-219
TCC: an R package for comparing tag count data with robust normalization strategies
Cited by: 394
Author(s): Jianqiang Sun, Tomoaki Nishiyama, Kentaro Shimizu, Koji Kadota
Software Mentions: 8
Published: over 11 years ago
10.1186/s12864-016-2848-2
ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences
Cited by: 21
Author(s): Wentao Yang, Philip Rosenstiel, Hinrich Schulenburg
Software Mentions: 8
Published: over 8 years ago
10.1186/s13071-018-3280-z
Probability of dengue transmission and propagation in a non-endemic temperate area: conceptual model and decision risk levels for early alert, prevention and control
Cited by: 13
Author(s): Cecilia Marques-Toledo, Maria Mercedes de Almeida Bendati, Cláudia Torres Codeço, Mauro Martins Teixeira
Software Mentions: 8
Published: almost 6 years ago
10.1155/2017/5310198
Robust Significance Analysis of Microarrays by Minimum <i>β</i>-Divergence Method
Cited by: 10
Author(s): Shahjaman, Nishith Kumar, Md. Manir Hossain Mollah, Shakil Ahmed, Anjuman Ara Begum, S. M. Shahinul Islam, Md. Nurul Haque Mollah
Software Mentions: 7
Published: almost 8 years ago
10.3389/fonc.2020.01409
Development and Validation of a Tumor Mutation Burden–Related Immune Prognostic Model for Lower-Grade Glioma
Cited by: 43
Author(s): Yin Wu, Xingjun Jiang, Jun Tan, Zhaoqi Xin, Quanwei Zhou, Chaohong Zhan, Xianyong Fu, Zhaoping Wu, Youwei Guo, Zhipeng Jiang, Chao Ren, Guihua Tang
Software Mentions: 7
Published: over 4 years ago
10.18632/aging.104116
Integrated analysis of a competing endogenous RNA network reveals an 11-lncRNA prognostic signature in ovarian cancer
Cited by: 3
Author(s): Yongjian Zhang, Hu Zhou, Mei‐Yin Zhang, Linan Xing, Chang Yang, Bairong Xia, Ge Lou
Software Mentions: 7
Published: about 4 years ago
10.3389/fonc.2021.681946
Prognostic Biomarkers on a Competitive Endogenous RNA Network Reveals Overall Survival in Triple-Negative Breast Cancer
Cited by: 3
Author(s): Wenxing Qin, Qi Feng, Jia Li, Ping Li, Yuan‐Sheng Zang
Software Mentions: 7
Published: over 3 years ago
10.3389/fgene.2021.638458
Expression Profile Analysis Identifies a Novel Seven Immune-Related Gene Signature to Improve Prognosis Prediction of Glioblastoma
Cited by: 5
Author(s): Li Hu, Zhibin Han, Xingbo Cheng, Sida Wang, Yumeng Feng, Zhiguo Lin
Software Mentions: 6
Published: over 3 years ago
10.3389/fonc.2021.657002
Prognostic Value of Eight-Gene Signature in Head and Neck Squamous Carcinoma
Cited by: 20
Author(s): Baoling Liu, Qiang Su, Jianhua Ma, Cheng Chen, Limin Wang, Fengyuan Che, Xueyuan Heng
Software Mentions: 6
Published: over 3 years ago
10.1136/jitc-2020-001942
Cell-free DNA copy number variations predict efficacy of immune checkpoint inhibitor-based therapy in hepatobiliary cancers
Cited by: 17
Author(s): Yang Xu, Ying Hu, Keyan Yang, Dongxu Wang, Jianzhen Lin, Junyu Long, Fucun Xie, Jianshan Mao, Jin Bian, Mei Guan, Jie Pan, Li Huo, Ke Hu, Xiaobo Yang, Yilei Mao, Xinting Sang, Jiao Zhang, Xi Wang, Henghui Zhang, Haitao Zhao
Software Mentions: 6
Published: over 3 years ago
10.3389/fcell.2021.682002
Identification of CDK2-Related Immune Forecast Model and ceRNA in Lung Adenocarcinoma, a Pan-Cancer Analysis
Cited by: 34
Author(s): Tingting Liu, Rui Li, Huo Chen, Jianping Li, Jie Yao, Xiu-Li Ji, Yi-Qing Qu
Software Mentions: 6
Published: over 3 years ago
10.1016/j.dib.2021.107264
Personalized prediction of repetitive transcranial magnetic stimulation clinical response in medication-refractory depression data
Cited by: 1
Author(s): Helene Hopman, Sandra S. M. Chan, Winnie Chiu Wing Chu, Hanna Lu, Chun‐Yu Tse, Steven Wai Ho Chau, Linda Chiu Wa Lam, Arthur F.T. Mak, Sebastiaan F. W. Neggers
Software Mentions: 6
Published: over 3 years ago
10.3390/genes11080868
Identification of circRNA-lncRNA-miRNA-mRNA Competitive Endogenous RNA Network as Novel Prognostic Markers for Acute Myeloid Leukemia
Cited by: 52
Author(s): Yuanrong Cheng, Yangfeng Su, Shoubi Wang, Yurun Liu, Lin Jin, Qi Wan, Ying Liu, Chaoyang Li, Xuan Sang, Yang Liu, Chang Liu, Zhichong Wang
Software Mentions: 5
Published: over 4 years ago
10.3389/fgene.2021.649270
Elevated GAS2L3 Expression Correlates With Poor Prognosis in Patients With Glioma: A Study Based on Bioinformatics and Immunohistochemical Analysis
Cited by: 3
Author(s): Yan Zhou, Limin Zhang, Sirong Song, Lixia Xu, Yan Yan, Haiyang Wu, Xiaoguang Tong, Hua Yan
Software Mentions: 5
Published: over 3 years ago
10.3389/fcell.2021.673295
Overexpression of PLXDC2 in Stromal Cell-Associated M2 Macrophages Is Related to EMT and the Progression of Gastric Cancer
Cited by: 15
Author(s): Yihan Guan, Yuzhang Du, Guanzheng Wang, Hongquan Gou, Yuezhen Xue, Jingsong Xu, Enhao Li, David W. Chan, Di Wu, Peiqing Xu, Peihong Ni, Dakang Xu, Yiqun Hu
Software Mentions: 5
Published: over 3 years ago
10.1042/BSR20211451
Identification of a glycolysis-related lncRNA prognostic signature for clear cell renal cell carcinoma
Cited by: 7
Author(s): Wei Ma, Manli Zhong, Xiaowu Liu
Software Mentions: 5
Published: over 3 years ago
10.1038/s41597-019-0337-6
Machine learning for the detection of early immunological markers as predictors of multi-organ dysfunction
Cited by: 16
Author(s): Laura Bravo-Merodio, Animesh Acharjee, Jon Hazeldine, Conor Bentley, Mark Foster, Georgios V. Gkoutos, Janet M. Lord
Software Mentions: 5
Published: almost 5 years ago
10.1155/2020/7082408
Identification and Validation of an Individualized EMT-Related Prognostic Risk Score Formula in Gastric Adenocarcinoma Patients
Cited by: 13
Author(s): Deyu Zhang, Siran Zhou, Bing-Rong Liu
Software Mentions: 5
Published: over 4 years ago
10.3389/fgene.2020.522831
Systematic Analyses of the Differentially Expressed Alternative Splicing Events in Gastric Cancer and Its Clinical Significance
Cited by: 2
Author(s): Changwei Lin, Bowen Yu, Mao Zhang, Yifei Chen, Liang Li, Delong Zhao
Software Mentions: 5
Published: about 4 years ago
10.3390/diagnostics9030079
Rethinking ME/CFS Diagnostic Reference Intervals via Machine Learning, and the Utility of Activin B for Defining Symptom Severity
Cited by: 7
Author(s): Brett A. Lidbury, Badia Kita, Alice Richardson, Donald P. Lewis, Edwina Privitera, Susan Hayward, David de Kretser, Mark P. Hedger
Software Mentions: 4
Published: over 5 years ago
10.1155/2021/6680066
A Prognostic Model for Brain Glioma Patients Based on 9 Signature Glycolytic Genes
Cited by: 8
Author(s): Bing-xiang Xiao, Panxing Wu, Feng Lu, Yan Xiuyou, Chao Ding
Software Mentions: 4
Published: over 3 years ago
10.1038/s42003-019-0506-3
The role of GRHL2 and epigenetic remodeling in epithelial–mesenchymal plasticity in ovarian cancer cells
Cited by: 55
Author(s): Vin Yee Chung, Tuan Zea Tan, Jieru Ye, Rui Huang, Hung Cheng Lai, Dennis Kappei, Heike Wollmann, Ernesto Guccione, Ruby Yun‐Ju Huang
Software Mentions: 4
Published: over 5 years ago
10.3389/fgene.2021.732376
CENPN Acts as a Novel Biomarker that Correlates With the Malignant Phenotypes of Glioma Cells
Cited by: 10
Author(s): Hailong Wu, Yan Zhou, Haiyang Wu, Lixia Xu, Yan Yan, Xiaoguang Tong, Hua Yan
Software Mentions: 4
Published: about 3 years ago
10.1186/1471-2105-7-359
Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data
Cited by: 321
Author(s): Ian B. Jeffery, Desmond G. Higgins, Aedín C. Culhane
Software Mentions: 4
Published: over 18 years ago
10.3389/fgene.2020.00796
Genome-Wide Profiling of Alternative Splicing Signature Reveals Prognostic Predictor for Esophageal Carcinoma
Cited by: 5
Author(s): Jian-Rong Sun, Chen-Fan Kong, Yanni Lou, Ran Yu, Xiang-Ke Qu, Liqun Jia
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pone.0165267
Plasma Metabolites Predict Severity of Depression and Suicidal Ideation in Psychiatric Patients-A Multicenter Pilot Analysis
Cited by: 87
Author(s): Daiki Setoyama, Takahiro A. Kato, Ryota Hashimoto, Hiroshi Kunugi, Kotaro Hattori, Kohei Hayakawa, Mina Sato-Kasai, Norihiro Shimokawa, Sachie Kaneko, Sumiko Yoshida, Yu Ichi Goto, Yuka Yasuda, Hidenaga Yamamori, Masahiro Ohgidani, Noriyuki Sagata, Daisuke Miura, Dongchon Kang, Shigenobu Kanba
Software Mentions: 4
Published: almost 8 years ago
10.1186/s12935-021-01915-x
Establishment and validation of a prognostic signature for lung adenocarcinoma based on metabolism‐related genes
Cited by: 26
Author(s): Wenwen Wang, Kidane Siele Embaye, Qing Yang, Lingzhi Qin, Chao Zhang, Liwei Liu, Xiaoqian Zhan, Fengdi Zhang, Xi Wang, Shenghui Qin
Software Mentions: 4
Published: over 3 years ago
10.1002/emmm.201201823
Functional genomics identifies five distinct molecular subtypes with clinical relevance and pathways for growth control in epithelial ovarian cancer
Cited by: 172
Author(s): Tuan Zea Tan, Qing Hao Miow, Ruby Yun‐Ju Huang, Ming Keong Wong, Jieru Ye, Jieying Amelia Lau, Meng Wu, Luqman Hakim Bin Abdul Hadi, Richie Soong, Mahesh Choolani, Ben Davidson, Jahn M. Nesland, Ling Zhi Wang, Noriomi Matsumura, Masaki Mandai, Ikuo Konishi, Boon Cher Goh, Jeffrey T. Chang, Jean Paul Thiery, Seiichi Mori
Software Mentions: 4
Published: over 11 years ago
10.1371/journal.pone.0073478
Virtual Screening Models for Prediction of HIV-1 RT Associated RNase H Inhibition
Cited by: 25
Author(s): Vasanthanathan Poongavanam, Jacob Kongsted
Software Mentions: 3
Published: about 11 years ago
10.18632/aging.202958
Identification of a novel glycolysis-related gene signature for predicting the prognosis of osteosarcoma patients
Cited by: 16
Author(s): Mengkai Yang, Xiao‐Jun Ma, Zhuoying Wang, Tao Zhang, Yingqi Hua, Zhengdong Cai
Software Mentions: 3
Published: over 3 years ago
10.1186/s12885-020-07298-y
HPV infection related immune infiltration gene associated therapeutic strategy and clinical outcome in HNSCC
Cited by: 8
Author(s): Hao Zeng, Xindi Song, Jianrui Ji, Linyan Chen, Qimeng Liao, Xuelei Ma
Software Mentions: 3
Published: over 4 years ago
10.1186/s12920-021-00892-4
Identification of biomarkers and pathogenesis in severe asthma by coexpression network analysis
Cited by: 7
Author(s): Zeyi Zhang, Jingjing Wang, Ou Chen
Software Mentions: 3
Published: almost 4 years ago
10.1155/2013/236850
Exploring Different Virtual Screening Strategies for Acetylcholinesterase Inhibitors
Cited by: 11
Author(s): Neha Mishra, Arijit Basu
Software Mentions: 3
Published: almost 12 years ago
10.1186/s12957-020-01921-9
Prediction and identification of immune genes related to the prognosis of patients with colon adenocarcinoma and its mechanisms
Cited by: 8
Author(s): Sihan Chen, Guodong Cao, Wei Wu, Yida Lu, Xueling He, Lei Yang, Ke Chen, Bo Chen, Mao Ming Xiong
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0015688
High-Definition Mapping of Retroviral Integration Sites Defines the Fate of Allogeneic T Cells After Donor Lymphocyte Infusion
Cited by: 40
Author(s): Claudia Cattoglio, Giulietta Maruggi, Cynthia C. Bartholomae, Nirav Malani, Danilo Pellin, Fabienne Cocchiarella, Zulma Magnani, Fabio Ciceri, Alessandro Ambrosi, Christof von Kalle, Frederic D. Bushman, Chiara Bonini, Manfred Schmidt, Fulvio Mavilio, Alessandra Recchia
Software Mentions: 3
Published: almost 14 years ago
10.1371/journal.pone.0075670
Multiplex Microsphere Immunoassays for the Detection of IgM and IgG to Arboviral Diseases
Cited by: 40
Author(s): Alison Jane Basile, Kalanthe Horiuchi, Amanda J. Panella, Janeen Laven, Olga Kosoy, Robert S. Lanciotti, Neeraja Venkateswaran, Brad J. Biggerstaff
Software Mentions: 3
Published: about 11 years ago
10.1155/2021/8839747
A 5-lncRNA Signature Associated with Smoking Predicts the Overall Survival of Patients with Muscle-Invasive Bladder Cancer
Cited by: 2
Author(s): Haoyue Sheng, Guiming Zhang, Yao Qi Huang, Lili Sun, Guohai Shi, Dingwei Ye
Software Mentions: 3
Published: almost 4 years ago
10.3389/fcvm.2020.622236
Characteristics of Blood Metabolic Profile in Coronary Heart Disease, Dilated Cardiomyopathy and Valvular Heart Disease Induced Heart Failure
Cited by: 9
Author(s): Chang Liu, Ruihua Li, Yang Liu, Zhenguo Li, Yanan Sun, Peiyuan Yin, Rihong Huang
Software Mentions: 3
Published: almost 4 years ago
10.3389/fonc.2021.690298
Effects of Inflammation on the Immune Microenvironment in Gastric Cancer
Cited by: 10
Author(s): Wenjie Zhao, Mingqing Liu, Mingyue Zhang, Yachen Wang, Yingli Zhang, Shiji Wang, Nan Zhang
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-020-71764-7
Cu and Zn isotope ratio variations in plasma for survival prediction in hematological malignancy cases
Cited by: 25
Author(s): Agustina A. M. B. Hastuti, Marta Costas‐Rodríguez, Akira Matsunaga, Takayuki Ichinose, Shotaro Hagiwara, Mari Shimura, Frank Vanhaecke
Software Mentions: 3
Published: about 4 years ago
10.1371/journal.pntd.0002577
Ecology and Geography of Transmission of Two Bat-Borne Rabies Lineages in Chile
Cited by: 38
Author(s): Luis E. Escobar, A. Townsend Peterson, Myriam Favi, Verónica Yung, Daniel J. Pons, Gonzalo Medina-Vogel
Software Mentions: 2
Published: almost 11 years ago
10.1371/journal.pone.0015573
Discovery and Preclinical Validation of Salivary Transcriptomic and Proteomic Biomarkers for the Non-Invasive Detection of Breast Cancer
Cited by: 222
Author(s): Lei Zhang, Hua Xiao, Scott Karlan, Hui Zhou, Jenny Gross, David Elashoff, David Akin, Xinmin Yan, David Chia, Beth Y. Karlan, David T. Wong
Software Mentions: 2
Published: almost 14 years ago
10.1155/2021/5536330
The Function and Prognostic Value of RNA-Binding Proteins in Colorectal Adenocarcinoma Were Analyzed Based on Bioinformatics of Smart Medical Big Data
Cited by: 1
Author(s): Haoran Zhao, Peng Wang, Haishi Liu, Yueyang Li, Qian Luo, Man Li, Yubao Zhang, Zengfu Song
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0081408
Circulating MicroRNAs in Relation to EGFR Status and Survival of Lung Adenocarcinoma in Female Non-Smokers
Cited by: 42
Author(s): Huan Zhang, Yue Su, Fanghua Xu, Jinyu Kong, Herbert Yu, Biyun Qian
Software Mentions: 2
Published: almost 11 years ago
10.1371/journal.pone.0250239
Identification of ubiquitination-related genes in human glioma as indicators of patient prognosis
Cited by: 7
Author(s): Lei Wang, Yuelin Liu, Chengmin Xuan, Yong Liu, Hengliang Shi, Yong Gao
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0000576
Loss of NOTCH2 Positively Predicts Survival in Subgroups of Human Glial Brain Tumors
Cited by: 61
Author(s): Jean-Louis Boulay, André R. Miserez, Christian Zweifel, Balasubramanian Sivasankaran, Veronika Kana, Anthony Ghaffari, Cordelia Luyken, Michael Sabel, Abdessamad Zerrouqi, Morten Wasner, Erwin G. Van Meir, Markus Tolnay, Guido Reifenberger, Adrian Merlo
Software Mentions: 2
Published: over 17 years ago
10.1371/journal.pone.0227703
High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management
Cited by: 27
Author(s): Jing Li, Siyun Liu, Ying Qin, Yan Zhang, Ning Wang, Huaijun Liu
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0106476
A Global View of Transcriptome Dynamics during Sporisorium scitamineum Challenge in Sugarcane by RNA-seq
Cited by: 99
Author(s): Youxiong Que, Yachun Su, Jinlong Guo, Qibin Wu, Liping Xu
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0217413
Topological data analysis of high resolution diabetic retinopathy images
Cited by: 27
Author(s): Kathryn Garside, Robin Henderson, Irina Makarenko, Cristina Masoller
Software Mentions: 2
Published: over 5 years ago
10.18632/oncotarget.17764
Identification and validation of a prognostic 9-genes expression signature for gastric cancer
Cited by: 35
Author(s): Zhiqiang Wang, Gongxing Chen, Qilong Wang, Wei Lü, Meiqing Xu
Software Mentions: 2
Published: over 7 years ago
10.1186/s12903-020-01125-3
Gingival bleeding and calculus among 12-year-old Chinese adolescents: a multilevel analysis
Cited by: 12
Author(s): Hong Chen, Rui Zhang, Ran Cheng, Ting Xu, Tao Zhang, Hong Xiao, Xing Zhao, Yunyun Wu, Li Cheng, Tao Hu
Software Mentions: 2
Published: over 4 years ago
10.3389/fmed.2021.670141
A Novel RNA-Binding Protein Signature to Predict Clinical Outcomes and Guide Clinical Therapy in Gastric Cancer
Cited by: 2
Author(s): Zhigang Qiu, Haitao Jiang, Kun Ju, Xichun Liu
Software Mentions: 2
Published: over 3 years ago
10.3389/fmed.2020.601602
Toward Machine-Learning-Based Decision Support in Diabetes Care: A Risk Stratification Study on Diabetic Foot Ulcer and Amputation
Cited by: 18
Author(s): Zeinab Schäfer, Andreas Mathisen, Kristina Bacher Svendsen, Susanne Engberg, Trine Rolighed Thomsen, Klaus Kirketerp‐Møller
Software Mentions: 2
Published: almost 4 years ago
10.3389/fonc.2020.01142
Identification of 9-Core Immune-Related Genes in Bladder Urothelial Carcinoma Prognosis
Cited by: 14
Author(s): Na Lei, Yu Bai, Yu Sun, Zhuo Wang, Wei Wang, Yuan Lin, Chenghai Zhao
Software Mentions: 2
Published: over 4 years ago
10.1186/1471-2105-8-415
Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets
Cited by: 26
Author(s): Michael Gormley, William Dampier, Adam Ertel, B. Karaçali, Aydın Tözeren
Software Mentions: 2
Published: about 17 years ago
10.3389/fonc.2020.633142
Discovery of New Catalytic Topoisomerase II Inhibitors for Anticancer Therapeutics
Cited by: 17
Author(s): Victor M. Matias-Barrios, Mariia Radaeva, Yi Song, Zaccary Alperstein, Ahn R. Lee, Veronika Schmitt, Joseph Lee, Fuqiang Ban, Ning Xie, Jianfei Qi, Nada Lallous, Martin Gleave, Artem Cherkasov, Xuesen Dong
Software Mentions: 2
Published: almost 4 years ago
10.1186/ar3819
Interferon type I signature may predict non response upon rituximab in rheumatoid arthritis patients
Cited by: 144
Author(s): Hennie G. Raterman, Saskia Vosslamber, Sander de Ridder, Michael T. Nurmohamed, Willem F. Lems, Maarten Boers, Mark A. van de Wiel, Ben A. C. Dijkmans, Cornelis L. Verweij, Alexandre E. Voskuyl
Software Mentions: 2
Published: almost 13 years ago
10.7150/jca.41193
Prognostic values of m6A RNA methylation regulators in differentiated Thyroid Carcinoma
Cited by: 14
Author(s): Nizhen Xu, Jian Chen, Guannan He, Li Gao, Deguang Zhang
Software Mentions: 2
Published: almost 5 years ago
10.1111/jcmm.16494
Construction of an immune‐related LncRNA signature with prognostic significance for bladder cancer
Cited by: 15
Author(s): Wenjie Luo, Xi Tian, Wenhao Xu, Yuanyuan Qu, Wenkai Zhu, Jie Wu, Chao Ma, Hai-Liang Zhang, Dingwei Ye, Yiping Zhu
Software Mentions: 2
Published: over 3 years ago
10.36660/abc.20190206
Os Escores HEART, TIMI e GRACE para Predição de Eventos Cardiovasculares Adversos Maiores no Período de 30 Dias na Era de Troponina I de Alta Sensibilidade
Cited by: 1
Author(s): Felipe Torralba, Alberto Navarro, Juan Castellanos-de la Hoz, Carlos Ortíz, Alberth Botero, Freddy Alarcón, Nicolás Isaza, Daniel Isaza
Software Mentions: 2
Published: almost 5 years ago
10.18632/aging.101753
A novel alternative splicing-based prediction model for uteri corpus endometrial carcinoma
Cited by: 12
Author(s): Gao Li, Gang Chen, Jin‐Shu Pang, Tiantian Li
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-021-97368-3
Exploration of the structural requirements of Aurora Kinase B inhibitors by a combined QSAR, modelling and molecular simulation approach
Cited by: 6
Author(s): Sajda Ashraf, Kara E. Ranaghan, Christopher Woods, Adrian J. Mulholland, Zaheer Ul-Haq
Software Mentions: 2
Published: about 3 years ago
10.1128/mSystems.00390-19
Simultaneous Tracking of Pseudomonas aeruginosa Motility in Liquid and at the Solid-Liquid Interface Reveals Differential Roles for the Flagellar Stators
Cited by: 13
Author(s): Andrew L. Hook, James L. Flewellen, Jean‐Frédéric Dubern, Alessandro M. Carabelli, Irwin M. Zaid, Richard M. Berry, Ricky D. Wildman, Noah A. Russell, Paul Williams, Morgan R. Alexander
Software Mentions: 2
Published: about 5 years ago
10.7717/peerj-cs.515
A deep learning approach to predict blood-brain barrier permeability
Cited by: 9
Author(s): Shrooq Alsenan, Isra Al-Turaiki, Alaaeldin M. Hafez
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pcbi.1001008
Deciphering the Code for Retroviral Integration Target Site Selection
Cited by: 44
Author(s): Federico Santoni, Oliver Hartley, Jeremy Luban
Software Mentions: 2
Published: almost 14 years ago
10.1002/advs.202100104
A Noninvasive Multianalytical Approach for Lung Cancer Diagnosis of Patients with Pulmonary Nodules
Cited by: 7
Author(s): Quan‐Xing Liu, Dong Zhou, Tiancheng Han, Lü Xiao, Bing Han, Man-Yuan Li, Guixue Yang, Qingyuan Li, Zhihua Pei, Yuanyuan Hong, Yaxi Zhang, Weizhi Chen, Hong Zheng, Ji He, Ji‐Gang Dai
Software Mentions: 2
Published: over 3 years ago
10.1186/s12889-017-4456-8
Factors associated with the occurrence of injuries requiring hospital transfer among older and working-age pedestrians in Kurume, Japan
Cited by: 2
Author(s): Takashi Nagata, Takeru Abe, Ayako Takamori, Yurika Kimura, Akihito Hagihara
Software Mentions: 1
Published: over 7 years ago
10.3390/e20080561
Statistical Significance of Earth’s Electric and Magnetic Field Variations Preceding Earthquakes in Greece and Japan Revisited
Cited by: 25
Author(s): N. V. Sarlis
Software Mentions: 1
Published: over 6 years ago
10.1002/2211-5463.12593
A six‐micro <scp>RNA</scp> signature to predict outcomes of patients with gastric cancer
Cited by: 5
Author(s): Jian Chen, Bing Hu, Wei Wang, Xiaojun Qian, Baoen Shan, Yong He
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13049-015-0112-4
The number of prehospital defibrillation shocks and 1-month survival in patients with out-of-hospital cardiac arrest
Cited by: 28
Author(s): Manabu Hasegawa, Takeru Abe, Takashi Nagata, Daisuke Onozuka, Akihito Hagihara
Software Mentions: 1
Published: over 9 years ago
10.1186/1753-6561-7-S7-S3
A new approach to enhance the performance of decision tree for classifying gene expression data
Cited by: 2
Author(s): Rafiul Hassan, Kotagiri Ramamohanarao
Software Mentions: 1
Published: almost 11 years ago
10.1186/s13024-019-0338-0
Neurofilament light chain is a promising serum biomarker in spinocerebellar ataxia type 3
Cited by: 58
Author(s): Quan‐Fu Li, Yi Dong, Lu Yang, Juan‐Juan Xie, Ming Yin, Yi‐Chu Du, Haixia Cheng, Ni Wang, Zhi‐Ying Wu
Software Mentions: 1
Published: about 5 years ago
10.3389/fcimb.2021.665406
Prediction of Gut Microbial Community Structure and Function in Polycystic Ovary Syndrome With High Low-Density Lipoprotein Cholesterol
Cited by: 13
Author(s): Xiaoying Zhu, Yanyu Li, Yuhang Jiang, Jisheng Zhang, Ru Duan, Lin Liu, Chao Liu, Xingyan Xu, Lu‐Gang Yu, Qian Wang, Fan Xiong, Cheng-Ming Ni, Lan Xu, Qing He
Software Mentions: 1
Published: over 3 years ago
10.1186/1471-2202-14-S1-P280
Trial by trial decoding of decisions in monkey MT cortex from small neuronal populations
Cited by: 0
Author(s): Ramon Nogueira, Jan Drugowitsch, Jordi Navarra, Rubén Moreno‐Bote
Software Mentions: 1
Published: over 11 years ago
10.1186/1471-2288-14-88
Latent class bivariate model for the meta-analysis of diagnostic test accuracy studies
Cited by: 12
Author(s): Paolo Eusebi, Johannes B. Reitsma, Jeroen K. Vermunt
Software Mentions: 1
Published: over 10 years ago
10.1186/1472-6947-14-75
Prediction of adverse cardiac events in emergency department patients with chest pain using machine learning for variable selection
Cited by: 60
Author(s): Nan Liu, Zhi Xiong Koh, Julian Park Nam Goh, Zhiping Lin, Benjamin Haaland, Boon Ping Ting, Marcus Eng Hock Ong
Software Mentions: 1
Published: over 10 years ago
10.1186/1741-7015-10-20
Is inhibition of kinase activity the only therapeutic strategy for LRRK2-associated Parkinson's disease?
Cited by: 56
Author(s): Iakov N. Rudenko, Ruth Chia, Mark Cookson
Software Mentions: 1
Published: over 12 years ago
10.1186/1471-2334-13-255
Establishment and application of real-time quantitative PCR for diagnosing invasive Aspergillosis via the blood in hematological patients: targeting a specific sequence of Aspergillus 28S-ITS2
Cited by: 21
Author(s): Yan Li, Liquan Gao, Yi Ding, Yuanyuan Xu, Min‐Hang Zhou, Wenrong Huang, Jing Yu, Honghua Li, Lili Wang, Li Yu
Software Mentions: 1
Published: over 11 years ago
10.1038/s41598-017-08314-1
Sphingomyelin as a myelin biomarker in CSF of acquired demyelinating neuropathies
Cited by: 22
Author(s): Giovanna Capodivento, Davide Visigalli, Martina Garnero, Roberto Fancellu, Michela Ferrara, Abdul Basit, Zeeshan Hamid, Vito Paolo Pastore, Silvano Garibaldi, Andrea Armirotti, Gianluigi Mancardi, Carlo Serrati, Elisabetta Capello, Angelo Schenone, Lucilla Nobbio
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-020-67038-x
A longitudinal observational retrospective study on risk factors and predictive model of PICC associated thrombosis in cancer patients
Cited by: 10
Author(s): Xiaomin Song, Hong Lu, Fang Chen, Zuowei Bao, LI Shan-quan, Siqin Li, Yinghua Peng, Qiao Li, Xiaohui Chen, Jingzhen Li, Weimin Zhang
Software Mentions: 1
Published: over 4 years ago
10.3389/fnbot.2013.00009
An intrinsic value system for developing multiple invariant representations with incremental slowness learning
Cited by: 23
Author(s): Matthew Luciw, Varun Raj Kompella, Sohrob Kazerounian, Jürgen Schmidhuber
Software Mentions: 1
Published: almost 12 years ago
10.1186/s12967-020-02655-8
Risk factors for severe COVID-19 in middle-aged patients without comorbidities: a multicentre retrospective study
Cited by: 25
Author(s): Peng Wang, Jing Sha, Mei Meng, Cuiyan Wang, Qingchun Yao, Zhongfa Zhang, Wenqing Sun, Xing‐Guang Wang, Guoqiang Qie, Xi Bai, Keke Liu, Yufeng Chu
Software Mentions: 1
Published: almost 4 years ago
10.1038/s41598-020-71150-3
Identification of 12 immune-related lncRNAs and molecular subtypes for the clear cell renal cell carcinoma based on RNA sequencing data
Cited by: 8
Author(s): Weimin Zhong, Bin Chen, Hongbin Zhong, Chaoqun Huang, Jianqiong Lin, Maoshu Zhu, Miaoxuan Chen, Yu Lin, Yao Lin, Jian Huang
Software Mentions: 1
Published: about 4 years ago
10.1186/1471-2105-7-175
LS-NMF: A modified non-negative matrix factorization algorithm utilizing uncertainty estimates
Cited by: 97
Author(s): Guoli Wang, Andrew V. Kossenkov, Michael F. Ochs
Software Mentions: 1
Published: over 18 years ago
10.3390/nu13072275
Diagnostic Power of Circulatory Metabolic Biomarkers as Metabolic Syndrome Risk Predictors in Community-Dwelling Older Adults in Northwest of England (A Feasibility Study)
Cited by: 7
Author(s): Razieh Hassannejad, Hamsa Sharrouf, Fahimeh Haghighatdoost, Ben Kirk, Farzad Amirabdollahian
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pgen.1003624
Gene Set Signature of Reversal Reaction Type I in Leprosy Patients
Cited by: 33
Author(s): Marianna Orlova, Aurélie Cobat, Nguyễn Thu Hương, Nguyen Ngoc Ba, Nguyen Van Thuc, John S. Spencer, Yohann Nédélec, Luis B. Barreiro, Vu Hong Thai, Laurent Abel, Alexandre Alcaïs, Erwin Schurr
Software Mentions: 1
Published: over 11 years ago
10.1186/1471-2105-14-83
HuntMi: an efficient and taxon-specific approach in pre-miRNA identification
Cited by: 68
Author(s): Adam Gudyś, Michał Wojciech Szcześniak, Marek Sikora, Izabela Makałowska
Software Mentions: 1
Published: over 11 years ago
10.1097/MD.0000000000024118
A panel of eight mRNA signatures improves prognosis prediction of osteosarcoma patients
Cited by: 2
Author(s): Bo Wu, Wang Zhan, Nong Lin, Xiaobo Yan, Zhangchun Lv, Zhimin Ying, Zhaoming Ye
Software Mentions: 1
Published: over 3 years ago
10.3389/fped.2020.00232
Predictive Model for Ambulatory Hypertension Based on Office Blood Pressure in Obese Children
Cited by: 5
Author(s): Girish Chandra Bhatt, Abhijit Pakhare, Priya Gogia, Shikha Jain, Neeta Gupta, Sudhir K. Goel, Rajesh Malik
Software Mentions: 1
Published: over 4 years ago
10.1186/ar4289
Clinical correlations with Porphyromonas gingivalis antibody responses in patients with early rheumatoid arthritis
Cited by: 62
Author(s): Sheila L. Arvikar, Dean S. Collier, Mark Fisher, Sebastian Unizony, George L. Cohen, Gail McHugh, Toshihisa Kawai, Klemen Strle, Allen C. Steere
Software Mentions: 1
Published: almost 12 years ago
10.3390/s120606978
Use of Finite Elements Analysis for a Weigh-in-Motion Sensor Design
Cited by: 7
Author(s): R Opitz, Viorel Goanță, P. Cârlescu, P D Bârsănescu, Nicolae Țăranu, Oana Mihaela Banu
Software Mentions: 1
Published: over 12 years ago
10.7150/jca.50274
Prognostic implication of glycolysis related gene signature in non-small cell lung cancer
Cited by: 6
Author(s): Jie Yao, Rui Li, Xiao Liu, Xi-Jia Zhou, Jianping Li, Tingting Liu, Huo Chen, Yi-Qing Qu
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0219467
Genome-wide investigation of the clinical significance and prospective molecular mechanism of minichromosome maintenance protein family genes in patients with Lung Adenocarcinoma
Cited by: 13
Author(s): Kang Liu, Min Kang, Xiwen Liao, Rensheng Wang
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0223322
Alcohol use and its association with sexual risk behaviors in the Armed Forces of the Republic of the Congo
Cited by: 1
Author(s): Bonnie Robin Tran, Nicole Glass, Osika Tripathi, Olivier Kalombo, Pascal Ibata, Romain Bagamboula Mpassi
Software Mentions: 1
Published: about 5 years ago