Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12575-018-0067-8
https://doi.org/10.1186/s12575-018-0067-8
Silhouette Scores for Arbitrary Defined Groups in Gene Expression Data and Insights into Differential Expression Results
Cited by: 23
Author(s): Shitao Zhao, Jianqiang Sun, Kentaro Shimizu, Koji Kadota
Published: almost 7 years ago
Software Mentions 10
bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSetPapers that mentioned: 1,962
bioconductor: baySeq
Empirical Bayesian analysis of patterns of differential expression in count dataPapers that mentioned: 139
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: TCC
TCC: Differential expression analysis for tag count data with robust normalization strategiesPapers that mentioned: 67
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.Papers that mentioned: 416
cran: RobLoxBioC
Infinitesimally Robust Estimators for Preprocessing -Omics DataPapers that mentioned: 3