bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.1038/s42003-019-0521-4

Multi-omic analysis in transgenic mice implicates omega-6/omega-3 fatty acid imbalance as a risk factor for chronic disease
Cited by: 49
Author(s): Kanakaraju Kaliannan, Xiangyong Li, Bin Wang, Qian Pan, Chih-Yu Chen, Lei Hao, Shanfu Xie, Jing Kang
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0206492

Morphological allometry constrains symmetric shape variation, but not asymmetry, of Halimeda tuna (Bryopsidales, Ulvophyceae) segments
Cited by: 6
Author(s): Jiří Neustupa, Yvonne‬ Němcová
Software Mentions: 4
Published: almost 7 years ago

10.3390/cells9071745

Ribosomal Protein uL11 as a Regulator of Metabolic Circuits Related to Aging and Cell Cycle
Cited by: 7
Author(s): Mateusz Mołoń, Eliza Molestak, Monika Kula-Maximenko, Przemysław Grela, Marek Tchórzewski
Software Mentions: 4
Published: about 5 years ago

10.1002/mbo3.1217

Deciphering Trifolium pratense L. holobiont reveals a microbiome resilient to future climate changes
Cited by: 4
Author(s): Sara Fareed Mohamed Wahdan, Benjawan Tanunchai, Yuting Wu, Chakriya Sansupa, Martin Schädler, Turki M. Dawoud, François Buscot, Witoon Purahong
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0257961

Bacterial community structure of early-stage biofilms is dictated by temporal succession rather than substrate types in the southern coastal seawater of India
Cited by: 15
Author(s): T.J. Sushmitha, Meora Rajeev, P. Sriyutha Murthy, Sangita Ganesh, Subba Rao Toleti, Shunmugiah Karutha Pandian
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0136018

Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient
Cited by: 14
Author(s): Rodrigo Leonel Lozano Orihuela, Carlos A. Peres, Gabriel Mendes, João André Jarenkow, Marcelo Tabarelli
Software Mentions: 4
Published: almost 10 years ago

10.1371/journal.pone.0227724

Gut-derived Flavonifractor species variants are differentially enriched during in vitro incubation with quercetin
Cited by: 6
Author(s): Gina Paola Rodriguez-Castaño, Federico E. Rey, Alejandro Caro‐Quintero, Alejandro Acosta-González
Software Mentions: 4
Published: over 4 years ago

10.3390/microorganisms7090341

DNA- and RNA- Derived Fungal Communities in Subsurface Aquifers Only Partly Overlap but React Similarly to Environmental Factors
Cited by: 14
Author(s): Ali Nawaz, Witoon Purahong, Martina Herrmann, Kirsten Küsel, François Buscot, Tesfaye Wubet
Software Mentions: 4
Published: almost 6 years ago

10.1007/s00253-018-8932-6

Insights into microbial communities mediating the bioremediation of hydrocarbon-contaminated soil from an Alpine former military site
Cited by: 63
Author(s): J.A. Siles, Rosa Margesin
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0069741

Morphological and Genetic Evidence for Multiple Evolutionary Distinct Lineages in the Endangered and Commercially Exploited Red Lined Torpedo Barbs Endemic to the Western Ghats of India
Cited by: 11
Author(s): Lijo John, Siby Philip, Neelesh Dahanukar, P. H. Anvar Ali, Josin Tharian, Rajeev Raghavan, Agostinho Antunes
Software Mentions: 4
Published: about 12 years ago

10.1186/s40168-016-0178-x

Variable responses of human microbiomes to dietary supplementation with resistant starch
Cited by: 257
Author(s): Arvind Venkataraman, Jessica R. Sieber, Alex W. Schmidt, Clive Waldron, Kevin R. Theis, Thomas M. Schmidt
Software Mentions: 4
Published: about 9 years ago

10.1186/s40168-018-0518-0

Bacterial microbiota protect an invasive bark beetle from a pine defensive compound
Cited by: 47
Author(s): Chihang Cheng, Jacob D. Wickham, Li Chen, Dandan Xu, Min Lü, Jianghua Sun
Software Mentions: 4
Published: about 7 years ago

10.1371/journal.pone.0199132

Effects of low dose silver nanoparticle treatment on the structure and community composition of bacterial freshwater biofilms
Cited by: 23
Author(s): Alexandra Grün, Constantin Benjamin App, Andreas Breidenbach, Jutta Meier, George Metreveli, Gabriele E. Schaumann, Werner Manz
Software Mentions: 4
Published: about 7 years ago

10.3390/microorganisms9081673

Variation in Sodic Soil Bacterial Communities Associated with Different Alkali Vegetation Types
Cited by: 2
Author(s): Andrea K. Borsodi, Márton Mucsi, Gergely Krett, Attila Szabó, Tamás Felföldi, Tibor Szili‐Kovács
Software Mentions: 4
Published: almost 4 years ago

10.1002/ece3.7158

Among‐individual diet variation within a lake trout ecotype: Lack of stability of niche use
Cited by: 4
Author(s): Louise Chavarie, Kimberly L. Howland, Les N. Harris, Colin P. Gallagher, Michael J. Hansen, William M. Tonn, Andrew M. Muir, Charles C. Krueger
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0177145

Microbiomes associated with infective stages of root-knot and lesion nematodes in soil
Cited by: 74
Author(s): Ahmed Elhady, Ariadna Giné, Olivera Topalović, Samuel Jacquiod, Søren J. Sørensen, Francisco Javier Sorribas, Holger Heuer
Software Mentions: 4
Published: about 8 years ago

10.1186/s40168-018-0610-5

The bacterial community significantly promotes cast iron corrosion in reclaimed wastewater distribution systems
Cited by: 30
Author(s): Guijuan Zhang, Bing Li, Jie Liu, Mingqiang Luan, Yao Long, Xiaotao Jiang, Ke Yu, Yuntao Guan
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0157442

Dung Beetles along a Tropical Altitudinal Gradient: Environmental Filtering on Taxonomic and Functional Diversity
Cited by: 90
Author(s): Cássio Alencar Nunes, Rodrigo Fagundes Braga, José Eugênio Côrtes Figueira, Frederico S. Neves, G. Wilson Fernandes
Software Mentions: 4
Published: about 9 years ago

10.3390/nu12072147

A Comprehensive Evaluation of the Impact of Bovine Milk Containing Different Beta-Casein Profiles on Gut Health of Ageing Mice
Cited by: 22
Author(s): Barbara Guantario, Marzia Giribaldi, Chiara Devirgiliis, Alberto Finamore, Elena Colombino, Maria Teresa Capucchio, Rocchina Evangelista, Vincenzo Motta, Paola Zinno, Simona Cirrincione, Sara Antoniazzi, Laura Cavallarin, Marianna Roselli
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0076070

Lineage-Specific Responses of Tooth Shape in Murine Rodents (Murinae, Rodentia) to Late Miocene Dietary Change in the Siwaliks of Pakistan
Cited by: 24
Author(s): Yuri Kimura, Louis L. Jacobs, Lawrence J. Flynn
Software Mentions: 4
Published: almost 12 years ago

10.3390/microorganisms9051038

Microbial Hotspots in Lithic Microhabitats Inferred from DNA Fractionation and Metagenomics in the Atacama Desert
Cited by: 15
Author(s): Dirk Schulze‐Makuch, Daniel Lipus, Felix L. Arens, Mickaël Baqué, Till L. V. Bornemann, Jean Pierre Paul de Vera, Markus Flury, Jan Frösler, Jacob Heinz, Yunha Hwang, Samuel P. Kounaves, Kai Mangelsdorf, Rainer U. Meckenstock, Mark Pannekens, Alexander J. Probst, Johan S. Sáenz, Janosch Schirmack, Michael Schloter, Philippe Schmitt‐Kopplin, Bernd Uwe Schneider, Jenny Uhl, Gisle Vestergaard, Bernardita Valenzuela, Pedro Zamorano, Dirk Wagner
Software Mentions: 4
Published: about 4 years ago

10.3390/ijms21176067

Long-Term Impact of Chemical and Alternative Fungicides Applied to Grapevine cv Nebbiolo on Berry Transcriptome
Cited by: 7
Author(s): Raffaella Balestrini, Stefano Ghignone, Gabriela Quiroga, Valentina Fiorilli, Irene Romano, Giorgio Gambino
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0192172

The influence of speed and size on avian terrestrial locomotor biomechanics: Predicting locomotion in extinct theropod dinosaurs
Cited by: 29
Author(s): Peter J. Bishop, David F. Graham, L. P. Lamas, John R. Hutchinson, Jonas Rubenson, Jennifer Ann Hancock, Robbie S. Wilson, Scott Hocknull, Rod Barrett, David G. Lloyd, Christofer J. Clemente
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0236595

Interactions of Segmented Filamentous Bacteria (Candidatus Savagella) and bacterial drivers in colitis-associated colorectal cancer development
Cited by: 4
Author(s): Annie E. Wolfe, Jacob E. Moskowitz, Craig L. Franklin, Timothy Wiemken, Aaron C. Ericsson
Software Mentions: 4
Published: about 5 years ago

10.1038/s41396-018-0059-3

Suppression of the activity of arbuscular mycorrhizal fungi by the soil microbiota
Cited by: 105
Author(s): Nanna Bygvraa Svenningsen, Stephanie J. Watts‐Williams, Erik J. Joner, Fabio Battini, Aikaterini Efthymiou, Carla Cruz-Paredes, Ole Nybroe, Iver Jakobsen
Software Mentions: 4
Published: over 7 years ago

10.3390/v11111041

Viruses in the Invasive Hornet Vespa velutina
Cited by: 36
Author(s): Anne Dalmon, Philippe Gayral, Damien Decante, Christophe Klopp, Diane Bigot, Maxime Thomasson, Elisabeth A. Herniou, Cédric Alaux, Yves Le Conte
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-018-33162-y

Influence of water quality on diversity and composition of fungal communities in a tropical river
Cited by: 22
Author(s): Mabel Ortiz-Vera, Luiz Ricardo Olchanheski, Eliane Gonçalves da Silva, Felipe Rezende de Lima, Lina Rocío del Pilar Rada Martinez, Maria Inês Zanoli Sato, Rodolfo Jaffé, Ronnie Alves, Simone Ichiwaki, Gabriel Padilla, Welington Luiz Araújo
Software Mentions: 4
Published: almost 7 years ago

10.1038/s41598-018-20347-8

Characterization of soil bacterial, archaeal and fungal communities inhabiting archaeological human-impacted layers at Monte Iato settlement (Sicily, Italy)
Cited by: 20
Author(s): J.A. Siles, Birgit Öhlinger, Tomáš Cajthaml, Erich Kistler, Rosa Margesin
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0256637

Beta diversity differs among hydrothermal vent systems: Implications for conservation
Cited by: 7
Author(s): Thomas Giguère, Verena Tunnicliffe
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-019-40080-0

Morphological, genetic and epigenetic aspects of homoploid hybridization between Salvia officinalis L. and Salvia fruticosa Mill.
Cited by: 15
Author(s): Ivan Radosavljević, Sandro Bogdanović, Ferhat Celep, Maja Filipović, Zlatko Šatović, Boštjan Surina, Zlatko Liber
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-017-01126-3

Bioinformatic Approaches Including Predictive Metagenomic Profiling Reveal Characteristics of Bacterial Response to Petroleum Hydrocarbon Contamination in Diverse Environments
Cited by: 106
Author(s): Arghya Mukherjee, Bobby Chettri, James S. Langpoklakpam, Pijush Basak, Aravind Prasad, Ashis K. Mukherjee, Maitree Bhattacharyya, Arvind Singh, Dhrubajyoti Chattopadhyay
Software Mentions: 4
Published: over 8 years ago

10.3390/genes11121503

Seascape Genomics of the Sugar Kelp Saccharina latissima along the North Eastern Atlantic Latitudinal Gradient
Cited by: 14
Author(s): Jaromir Guzinski, Paolo Ruggeri, Marion Ballenghien, Stéphane Mauger, Bertrand Jacquemin, Chloé Jollivet, Jérôme Coudret, Lucie Jaugeon, Christophe Destombe, Myriam Valéro
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-017-12265-y

Nutrient quality of vertebrate dung as a diet for dung beetles
Cited by: 46
Author(s): Kevin Frank, Adrian Brückner, Andrea Hilpert, Michael Heethoff, Nico Blüthgen
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pone.0092148

Phylogeography of the Tropical Planktonic Foraminifera Lineage Globigerinella Reveals Isolation Inconsistent with Passive Dispersal by Ocean Currents
Cited by: 40
Author(s): Agnes Weiner, Manuel F. G. Weinkauf, Atsushi Kurasawa, Kate Darling, Michal Kučera, Guido W. Grimm
Software Mentions: 4
Published: over 11 years ago

10.3389/fpls.2020.00817

Morphological and Genetic Variation in Monocultures, Forestry Systems and Wild Populations of Agave maximiliana of Western Mexico: Implications for Its Conservation
Cited by: 17
Author(s): Dánae Cabrera-Toledo, Ofelia Vargas‐Ponce, Sabina Ascencio-Ramírez, Luis Mario Valadez-Sandoval, Jessica Pérez‐Alquicira, Judith Morales-Saavedra, Oassis F. Huerta-Galván
Software Mentions: 4
Published: about 5 years ago

10.3389/fpsyg.2020.488871

Formal Syntax and Deep History
Cited by: 11
Author(s): Andrea Ceolin, Cristina Guardiano, Monica Alexandrina Irimia, Giuseppe Longobardi
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pntd.0008881

Status and forecast of leprosy in the still endemic province of Formosa in northern Argentina
Cited by: 2
Author(s): María Rosa Arnaiz, Hernán A. Iuri, José I. Franco, Lucila Arzamendia, María Soledad Santini, Hugo C. Recalde
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2019.00169

Biogeographic Patterns and Assembly Mechanisms of Bacterial Communities Differ Between Habitat Generalists and Specialists Across Elevational Gradients
Cited by: 43
Author(s): Luo Zhengming, Jinxian Liu, Pengyu Zhao, Tong Jia, Cui Li, Bo Chai
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2020.00198

Under the Christmas Tree: Belowground Bacterial Associations With Abies nordmanniana Across Production Systems and Plant Development
Cited by: 7
Author(s): Adriana M. García-Lemos, Alex Gobbi, Mette Haubjerg Nicolaisen, Lars Hansen, Thomas Roitsch, Bjarke Veierskov, Ole Nybroe
Software Mentions: 4
Published: over 5 years ago

10.3390/plants10030558

Comparison of Genomic Prediction Methods for Yellow, Stem, and Leaf Rust Resistance in Wheat Landraces from Afghanistan
Cited by: 11
Author(s): Muhammad Massub Tehseen, Zakaria Kehel, Carolina Sansaloni, Marta S. Lopes, Ahmed Amri, Ezgi Kurtulus, K. Nazari
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0047879

Simultaneous Amplicon Sequencing to Explore Co-Occurrence Patterns of Bacterial, Archaeal and Eukaryotic Microorganisms in Rumen Microbial Communities
Cited by: 281
Author(s): Sandra Kittelmann, Henning Seedorf, William A. Walters, José C. Clemente, Rob Knight, Jeffrey I. Gordon, Peter H. Janssen
Software Mentions: 4
Published: over 12 years ago

10.3389/fmicb.2016.02067

Fine Spatial Scale Variation of Soil Microbial Communities under European Beech and Norway Spruce
Cited by: 72
Author(s): Heiko Nacke, Kezia Goldmann, Ingo Schöning, Birgit Pfeiffer, Kristin Kaiser, Genis Castillo-Villamizar, Marion Schrumpf, François Buscot, Rolf Daniel, Tesfaye Wubet
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2020.00993

The Core Gut Microbiome of Black Soldier Fly (Hermetia illucens) Larvae Raised on Low-Bioburden Diets
Cited by: 71
Author(s): Thomas Klammsteiner, Andreas Walter, Tajda Bogataj, Carina Desirée Heussler, Blaž Stres, Florian M. Steiner, Birgit C. Schlick‐Steiner, Wolfgang Arthofer, Heribert Insam
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2018.02590

Two Populations of Mites (Tyrophagus putrescentiae) Differ in Response to Feeding on Feces-Containing Diets
Cited by: 18
Author(s): Jan Hubert, Marta Nešvorná, B. Sopko, Jaroslav Smrž, Pavel B. Klimov, Tomáš Erban
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2015.01478

Potential Activity, Size, and Structure of Sulfate-Reducing Microbial Communities in an Exposed, Grazed and a Sheltered, Non-Grazed Mangrove Stand at the Red Sea Coast
Cited by: 7
Author(s): Melike Balk, Joost A. Keuskamp, Hendrikus J. Laanbroek
Software Mentions: 4
Published: over 9 years ago

10.3389/fmicb.2019.01407

Predominance of Cand. Patescibacteria in Groundwater Is Caused by Their Preferential Mobilization From Soils and Flourishing Under Oligotrophic Conditions
Cited by: 143
Author(s): Martina Herrmann, Carl‐Eric Wegner, Martin Taubert, Patricia Geesink, Katharina Lehmann, Lijuan Yan, Robert Lehmann, Kai Uwe Totsche, Kirsten Küsel
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2019.00006

Fungal Biodiversity of the Most Common Types of Polish Soil in a Long-Term Microplot Experiment
Cited by: 38
Author(s): Jarosław Grządziel, Anna Gałązka
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0209887

Seabird and pinniped shape soil bacterial communities of their settlements in Cape Shirreff, Antarctica
Cited by: 6
Author(s): Lía Ramírez-Fernández, Nicole Trefault, Margarita Carú, Julieta Orlando
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0200709

Highly diverse Bronze Age population dynamics in Central-Southern Europe and their response to regional climatic patterns
Cited by: 17
Author(s): Giacomo Capuzzo, Marco Zanon, Marta Dal Corso, Wiebke Kirleis, Juan Antonio Barceló
Software Mentions: 4
Published: almost 7 years ago

10.3389/fmicb.2021.647921

Higher Abundance of Sediment Methanogens and Methanotrophs Do Not Predict the Atmospheric Methane and Carbon Dioxide Flows in Eutrophic Tropical Freshwater Reservoirs
Cited by: 11
Author(s): Gabrielle Maria Fonseca Pierangeli, Mércia Regina Domingues, Tatiane Araújo de Jesus, Lúcia Helena Gomes Coelho, Werner Siegfried Hanisch, Marcelo Luiz Martins Pompêo, Flávia Talarico Saia, Gustavo Bueno Gregoracci, Roseli Frederigi Benassi
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2017.02499

Comparative Metagenomics Reveals the Distinctive Adaptive Features of the Spongia officinalis Endosymbiotic Consortium
Cited by: 36
Author(s): Elham Karimi, Maria João Ramos, Jorge M. S. Gonçalves, Joana R. Xavier, Margarida Reis, Rodrigo Costa
Software Mentions: 4
Published: over 7 years ago

10.1098/rspb.2020.3150

Evolutionary versatility of the avian neck
Cited by: 9
Author(s): Ryan D. Marek, Peter L. Falkingham, Roger Benson, James Gardiner, Thomas W. Maddox, Karl T. Bates
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2015.00573

Revealing the unexplored fungal communities in deep groundwater of crystalline bedrock fracture zones in Olkiluoto, Finland
Cited by: 63
Author(s): Elina Sohlberg, Malin Bomberg, Hanna Miettinen, Mari Nyyssönen, Heikki Salavirta, Minna Vikman, Merja Itävaara
Software Mentions: 4
Published: about 10 years ago

10.1111/1462-2920.14808

Volatile‐mediated antagonism of soil bacterial communities against fungi
Cited by: 39
Author(s): Yong Li, Paolina Garbeva, Xiaojiao Liu, Paulien J. A. Klein Gunnewiek, Anna Clocchiatti, Maria P. J. Hundscheid, Xingxiang Wang, Wietse de Boer
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-021-83747-3

Testing for phylogenetic signal in claws suggests great influence of ecology on Caribbean intertidal arthropods (Acari, Oribatida)
Cited by: 8
Author(s): Michaela Kerschbaumer, Tobias Pfingstl
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-021-89002-z

Mechanical biofilm disruption causes microbial and immunological shifts in periodontitis patients
Cited by: 24
Author(s): William Johnston, Bob T. Rosier, Alejandro Artacho, Michael Paterson, Krystyna Piela, Christopher Delaney, Jason L. Brown, Gordon Ramage, Álex Mira, Shauna Culshaw
Software Mentions: 4
Published: about 4 years ago

10.1038/s41598-021-83417-4

Soil mite communities (Acari: Mesostigmata) as indicators of urban ecosystems in Bucharest, Romania
Cited by: 9
Author(s): Minodora Manu, Raluca Ioana Băncilă, Constantin-Ciprian Bîrsan, Owen Mountford, Marilena Onete
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2016.00582

Development of Ruminal and Fecal Microbiomes Are Affected by Weaning But Not Weaning Strategy in Dairy Calves
Cited by: 123
Author(s): S. J. Meale, Shucong Li, Paula Azevedo, Hooman Derakhshani, J.C. Plaizier, Ehsan Khafipour, M.A. Steele
Software Mentions: 4
Published: about 9 years ago

10.1038/s41598-021-86406-9

Extreme philopatry and genetic diversification at unprecedented scales in a seabird
Cited by: 6
Author(s): D. K. Danckwerts, Laurence Humeau, Patrick Pinet, Christopher D. McQuaid, Matthieu Le Corre
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-020-68136-6

Effects of substratum and depth on benthic harmful dinoflagellate assemblages
Cited by: 13
Author(s): Li Keat Lee, Zhen Fei Lim, Haifeng Gu, Leo Lai Chan, R. Wayne Litaker, Patricia A. Tester, Chui Pin Leaw, Po Teen Lim
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-020-65571-3

Assessing distribution shifts and ecophysiological characteristics of the only Antarctic winged midge under climate change scenarios
Cited by: 22
Author(s): Tamara Contador, Melisa Gañán, Gustavo Bizama, Guillermo Fuentes-Jaque, Luis Morales, Javier Rendoll-Cárcamo, Felipe Lorenz Simões, James H. Kennedy, Ricardo Rozzi, Peter Convey
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-020-62570-2

Scavenging crustacean fauna in the Chilean Patagonian Sea
Cited by: 3
Author(s): Guillermo Figueroa-Muñoz, Marco A. Retamal, Patricio R. De Los Ríos, Carlos Esse, Jorge Pérez-Schultheiss, Rolando Vega-Aguayo, Luz Boyero, Francisco Correa‐Araneda
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-020-61569-z

Microbial community structure and functional properties in permanently and seasonally flooded areas in Poyang Lake
Cited by: 11
Author(s): Yang Liu, Ze Ren, Xiaodong Qu, Min Zhang, Yang Yu, Yuhang Zhang, Wenqi Peng
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-019-46330-5

Geometric morphometrics for the study of facial expressions in non-human animals, using the domestic cat as an exemplar
Cited by: 34
Author(s): Lauren Finka, Stélio Pacca Loureiro Luna, Juliana Tabarelli Brondani, Yorgos Tzimiropoulos, John McDonagh, Mark J. Farnworth, Marcello Ruta, Daniel S. Mills
Software Mentions: 4
Published: about 6 years ago

10.1098/rsos.202265

The impacts of past, present and future ocean chemistry on predatory planktonic snails
Cited by: 4
Author(s): Deborah Wall-Palmer, Lisette Mekkes, Paula Ramos-Silva, Linda K. Dämmer, Erica Goetze, Karel Bakker, Elza Duijm, Katja T. C. A. Peijnenburg
Software Mentions: 4
Published: almost 4 years ago

10.1038/srep16807

Application of density gradient for the isolation of the fecal microbial stool component and the potential use thereof
Cited by: 40
Author(s): Arancha Hevia, Susana Delgado, Abelardo Margollés, Borja Sánchez
Software Mentions: 4
Published: over 9 years ago

10.1038/s41598-020-67631-0

Soil as an extended composite phenotype of the microbial metagenome
Cited by: 37
Author(s): Andrew L. Neal, Aurélie Bacq-Labreuil, Xiaoxian Zhang, Ian M. Clark, Kevin Coleman, Sacha J. Mooney, Karl Ritz, John W. Crawford
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-020-78934-7

DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
Cited by: 30
Author(s): Luiz Henrique Rosa, Thamar Holanda da Silva, Mayara Baptistucci Ogaki, Otávio Henrique Bezerra Pinto, Michael Stech, Peter Convey, Micheline Carvalho‐Silva, Carlos A. Rosa, Paulo Eduardo Aguiar Saraiva Câmara
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-020-58587-2

Microbial Diversity and Metabolite Profiles of Palm Wine Produced From Three Different Palm Tree Species in Côte d’Ivoire
Cited by: 26
Author(s): Théodore N. Djeni, Karen H. Kouame, Francine D. M. Ake, Laurent S. T. Amoikon, Marcellin Koffi Djè, Kumaraswamy Jeyaram
Software Mentions: 3
Published: over 5 years ago

10.1007/s11356-018-3765-5

Inter-species and inter-colony differences in elemental concentrations in eggshells of sympatrically nesting great cormorants Phalacrocorax carbo and grey herons Ardea cinerea
Cited by: 2
Author(s): Dariusz Jakubas, Ignacy Kitowski, Dariusz Wiącek, Szymon Bzoma
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2021.593023

Rhizodegradation of Pyrene by a Non-pathogenic Klebsiella pneumoniae Isolate Applied With Tagetes erecta L. and Changes in the Rhizobacterial Community
Cited by: 11
Author(s): Jina Rajkumari, Yashmin Choudhury, Kasturi Bhattacharjee, Piyush Pandey
Software Mentions: 3
Published: over 4 years ago

10.1002/ece3.7846

Female and male Eurasian lynx have distinct spatial tactics at different life‐history stages in a high‐density population
Cited by: 3
Author(s): Deniz Mengüllüoğlu, Sarah Edwards, Heribert Hofer, Anne Berger
Software Mentions: 3
Published: about 4 years ago

10.1002/ece3.2942

Little association of biological trait values with environmental variables in invasive alien round goby (Neogobius melanostomus)
Cited by: 12
Author(s): Alexander F. Cerwenka, Alfredo Pagnotta, Carolin Elisabeth Böker, Joerg Brandner, Juergen Geist, Ulrich K. Schliewen
Software Mentions: 3
Published: over 8 years ago

10.3390/insects12020127

Biocontrol of Melolontha spp. Grubs in Organic Strawberry Plantations by Entomopathogenic Fungi as Affected by Environmental and Metabolic Factors and the Interaction with Soil Microbial Biodiversity
Cited by: 8
Author(s): Małgorzata Tartanus, Ewa M. Furmanczyk, Loredana Canfora, Flavia Pinzari, C. Tkaczuk, A. Majchrowska-Safaryan, Eligio Malusà
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-021-91452-4

Host specific endophytic microbiome diversity and associated functions in three varieties of scented black rice are dependent on growth stage
Cited by: 29
Author(s): Kunal Singha, Brahmanand Singh, Piyush Pandey
Software Mentions: 3
Published: about 4 years ago

10.1038/s41598-021-87162-6

Limnological response from high-altitude wetlands to the water supply in the Andean Altiplano
Cited by: 2
Author(s): Ignacio García-Sanz, Inger Heine-Fuster, José A. Luque, H. Pizarro, Rodrigo Castillo, Matías Pailahual, Manuel Prieto, Pablo Pérez-Portilla, Adriana Aránguiz-Acuña
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-021-96842-2

Genomic comparisons and phylogenetic analysis of mastitis-related staphylococci with a focus on adhesion, biofilm, and related regulatory genes
Cited by: 6
Author(s): Lucas José Luduverio Pizauro, Camila Chioda de Almeida, Saura R. Silva, Janet I. MacInnes, Andrew M. Kropinski, L. F. Zafalon, Fernando Antônio de Ávila, Alessandro de Mello Varani
Software Mentions: 3
Published: almost 4 years ago

10.1002/ece3.3138

Snails in the desert: Species diversification of Theba (Gastropoda: Helicidae) along the Atlantic coast of <scp>NW</scp> Africa
Cited by: 7
Author(s): Carola Greve, Martín Haase, Rainer Hutterer, Dennis Rödder, Flora Ihlow, Bernhard Misof
Software Mentions: 3
Published: about 8 years ago

10.3389/fmicb.2017.00431

Reactivation of Deep Subsurface Microbial Community in Response to Methane or Methanol Amendment
Cited by: 22
Author(s): Pauliina Rajala, Malin Bomberg
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2016.00284

Biogeochemical and Microbial Variation across 5500 km of Antarctic Surface Sediment Implicates Organic Matter as a Driver of Benthic Community Structure
Cited by: 42
Author(s): Deric R. Learman, Michael W. Henson, J. Cameron Thrash, Ben Temperton, Pamela M. Brannock, Scott R. Santos, Andrew R. Mahon, Kenneth M. Halanych
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-020-73540-z

Stable isotope evidence for dietary diversification in the pre-Columbian Amazon
Cited by: 12
Author(s): André Carlo Colonese, Rachel Winter, Rafael Brandi, Thiago Fossile, Ricardo Fernandes, Silvia Soncin, Krista McGrath, Matthew von Tersch, Arkley Marques Bandeira
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-020-65031-y

Metagenomic analysis of an urban resistome before and after wastewater treatment
Cited by: 50
Author(s): Felipe Lira, Ivone Vaz‐Moreira, Javier Tamames, Célia M. Manaia, José Luis Martínez
Software Mentions: 3
Published: about 5 years ago

10.1093/femsec/fiaa163

Bacterial community assembly in Atlantic cod larvae (Gadus morhua): contributions of ecological processes and metacommunity structure
Cited by: 19
Author(s): Ragnhild Inderberg Vestrum, Kari J.K. Attramadal, Ôlav Vadstein, Madeleine S. Gundersen, Ingrid Bakke
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-020-61420-5

Eosinophil accumulation in postnatal lung is specific to the primary septation phase of development
Cited by: 17
Author(s): Lucas F. Loffredo, Mackenzie E. Coden, Brian M. Jeong, Matthew T. Walker, Kishore R. Anekalla, Ton C. Doan, Raul I. Rodriguez, M.J. Browning, Ki-Won Nam, James J. Lee, Hiam Abdala‐Valencia, Sergejs Berdnikovs
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-51321-7

Holocene vegetation patterns in southern Lithuania indicate astronomical forcing on the millennial and centennial time scales
Cited by: 10
Author(s): Andrej Spiridonov, Lauras Balakauskas, Robertas Stankevič, Gražyna Kluczynska, Laura Gedminienė, Miglė Stančikaitė
Software Mentions: 3
Published: almost 6 years ago

10.1038/srep18563

Gut bacterial diversity of the tribes of India and comparison with the worldwide data
Cited by: 106
Author(s): Madhusmita Dehingia, Kanchal Thangjam devi, Narayan Chandra Talukdar, Rupjyoti Talukdar, Nageshwar Reddy, Sharmila S. Mande, Manab Deka, Mojibur R. Khan
Software Mentions: 3
Published: over 9 years ago

10.3389/fmicb.2017.00232

Response of Deep Subsurface Microbial Community to Different Carbon Sources and Electron Acceptors during ∼2 months Incubation in Microcosms
Cited by: 30
Author(s): Lotta Purkamo, Malin Bomberg, Mari Nyyssönen, Lasse Ahonen, Ilmo Kukkonen, Merja Itävaara
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-020-67512-6

Impact of habitat alteration on amphibian diversity and species composition in a lowland tropical rainforest in Northeastern Leyte, Philippines
Cited by: 8
Author(s): Syrus Cesar Decena, Carlo Aguirre Avorque, Ian Christopher Pacle Decena, Pol Delbert Asis, Bryan Pacle
Software Mentions: 3
Published: about 5 years ago

10.1098/rsos.181317

Mechanical significance of morphological variation in diprotodont incisors
Cited by: 3
Author(s): Philip James Rencher Morris, Philip G. Cox, Samuel N. Cobb
Software Mentions: 3
Published: over 6 years ago

10.1038/srep16350

Sample storage conditions significantly influence faecal microbiome profiles
Cited by: 329
Author(s): Jocelyn M. Choo, Lex E. X. Leong, Geraint B. Rogers
Software Mentions: 3
Published: over 9 years ago

10.1038/srep12872

Geochemical influences and mercury methylation of a dental wastewater microbiome
Cited by: 17
Author(s): Asha Rani, Karl J. Rockne, James L. Drummond, Muntasar Al-Hinai, Ravi Ranjan
Software Mentions: 3
Published: almost 10 years ago

10.1098/rsos.170899

Still slow, but even steadier: an update on the evolution of turtle cranial disparity interpolating shapes along branches
Cited by: 8
Author(s): Christian Foth, Eduardo Ascarrunz, Walter G. Joyce
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-019-49097-x

Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting
Cited by: 16
Author(s): Martina Grdiša, Ivan Radosavljević, Zlatko Liber, Gjoshe Stefkov, Parthenopi Ralli, Paschalina Chatzopoulou, Klaudija Carović‐Stanko, Zlatko Šatović
Software Mentions: 3
Published: almost 6 years ago

10.1098/rspb.2014.2114

Cranial biomechanics underpins high sauropod diversity in resource-poor environments
Cited by: 57
Author(s): David Button, Emily J. Rayfield, Paul M. Barrett
Software Mentions: 3
Published: over 10 years ago

10.1098/rspb.2019.0296

Network modularity influences plant reproduction in a mosaic tropical agroecosystem
Cited by: 19
Author(s): Manu E. Saunders, Romina Rader
Software Mentions: 3
Published: over 6 years ago

10.1098/rspb.2013.1865

The radiation of cynodonts and the ground plan of mammalian morphological diversity
Cited by: 90
Author(s): Marcello Ruta, Jennifer Botha‐Brink, Stephen Α. Mitchell, Michael J. Benton
Software Mentions: 3
Published: almost 12 years ago

10.1038/s41598-019-52395-z

Environmental and ecological factors mediate taxonomic composition and body size of polyplacophoran assemblages along the Peruvian Province
Cited by: 6
Author(s): Christian M. Ibáñez, Melany Waldisperg, Felipe I. Torres, Sergio A. Carrasco, Javier Sellanes, M. Cecilia Pardo‐Gandarillas, Julia D. Sigwart
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-50624-z

Diversity, Co-occurrence and Implications of Fungal Communities in Wastewater Treatment Plants
Cited by: 66
Author(s): Hailemariam Abrha Assress, Ramganesh Selvarajan, Hlengilizwe Nyoni, Khayalethu Ntushelo, Bhekie B. Mamba, Titus A.M. Msagati
Software Mentions: 3
Published: almost 6 years ago

10.1038/srep12179

Resilience and receptivity worked in tandem to sustain a geothermal mat community amidst erratic environmental conditions
Cited by: 18
Author(s): Wriddhiman Ghosh, Chayan Roy, Ranjit Roy, Pravin Nilawe, Amartya Mukherjee, Prabir Kumar Haldar, Neeraj Chauhan, Sabyasachi Bhattacharya, Atima Agarwal, Ashish George, Prosenjit Pyne, Sanjay K. Mandal, Moidu Jameela Rameez, Goutam Bala
Software Mentions: 3
Published: about 10 years ago

10.3389/fmicb.2015.00674

Functional gene pyrosequencing reveals core proteobacterial denitrifiers in boreal lakes
Cited by: 45
Author(s): Jatta Saarenheimo, Marja Tiirola, Antti J. Rissanen
Software Mentions: 3
Published: about 10 years ago

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