bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.3390/cells9071745

Ribosomal Protein uL11 as a Regulator of Metabolic Circuits Related to Aging and Cell Cycle
Cited by: 7
Author(s): Mateusz Mołoń, Eliza Molestak, Monika Kula-Maximenko, Przemysław Grela, Marek Tchórzewski
Software Mentions: 4
Published: almost 6 years ago

10.1002/ece3.7158

Among‐individual diet variation within a lake trout ecotype: Lack of stability of niche use
Cited by: 4
Author(s): Louise Chavarie, Kimberly L. Howland, Les N. Harris, Colin P. Gallagher, Michael J. Hansen, William M. Tonn, Andrew M. Muir, Charles C. Krueger
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0136018

Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient
Cited by: 14
Author(s): Rodrigo Leonel Lozano Orihuela, Carlos A. Peres, Gabriel Mendes, João André Jarenkow, Marcelo Tabarelli
Software Mentions: 4
Published: almost 11 years ago

10.1371/journal.pone.0199132

Effects of low dose silver nanoparticle treatment on the structure and community composition of bacterial freshwater biofilms
Cited by: 23
Author(s): Alexandra Grün, Constantin Benjamin App, Andreas Breidenbach, Jutta Meier, George Metreveli, Gabriele E. Schaumann, Werner Manz
Software Mentions: 4
Published: almost 8 years ago

10.3390/microorganisms7090341

DNA- and RNA- Derived Fungal Communities in Subsurface Aquifers Only Partly Overlap but React Similarly to Environmental Factors
Cited by: 14
Author(s): Ali Nawaz, Witoon Purahong, Martina Herrmann, Kirsten Küsel, François Buscot, Tesfaye Wubet
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0192172

The influence of speed and size on avian terrestrial locomotor biomechanics: Predicting locomotion in extinct theropod dinosaurs
Cited by: 29
Author(s): Peter J. Bishop, David F. Graham, L. P. Lamas, John R. Hutchinson, Jonas Rubenson, Jennifer Ann Hancock, Robbie S. Wilson, Scott Hocknull, Rod Barrett, David G. Lloyd, Christofer J. Clemente
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0227724

Gut-derived Flavonifractor species variants are differentially enriched during in vitro incubation with quercetin
Cited by: 6
Author(s): Gina Paola Rodriguez-Castaño, Federico E. Rey, Alejandro Caro‐Quintero, Alejandro Acosta-González
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0069741

Morphological and Genetic Evidence for Multiple Evolutionary Distinct Lineages in the Endangered and Commercially Exploited Red Lined Torpedo Barbs Endemic to the Western Ghats of India
Cited by: 11
Author(s): Lijo John, Siby Philip, Neelesh Dahanukar, P. H. Anvar Ali, Josin Tharian, Rajeev Raghavan, Agostinho Antunes
Software Mentions: 4
Published: almost 13 years ago

10.1186/s40168-016-0178-x

Variable responses of human microbiomes to dietary supplementation with resistant starch
Cited by: 257
Author(s): Arvind Venkataraman, Jessica R. Sieber, Alex W. Schmidt, Clive Waldron, Kevin R. Theis, Thomas M. Schmidt
Software Mentions: 4
Published: almost 10 years ago

10.1186/s40168-018-0518-0

Bacterial microbiota protect an invasive bark beetle from a pine defensive compound
Cited by: 47
Author(s): Chihang Cheng, Jacob D. Wickham, Li Chen, Dandan Xu, Min Lü, Jianghua Sun
Software Mentions: 4
Published: almost 8 years ago

10.3390/microorganisms9081673

Variation in Sodic Soil Bacterial Communities Associated with Different Alkali Vegetation Types
Cited by: 2
Author(s): Andrea K. Borsodi, Márton Mucsi, Gergely Krett, Attila Szabó, Tamás Felföldi, Tibor Szili‐Kovács
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0257961

Bacterial community structure of early-stage biofilms is dictated by temporal succession rather than substrate types in the southern coastal seawater of India
Cited by: 15
Author(s): T.J. Sushmitha, Meora Rajeev, P. Sriyutha Murthy, Sangita Ganesh, Subba Rao Toleti, Shunmugiah Karutha Pandian
Software Mentions: 4
Published: over 4 years ago

10.1007/s00253-018-8932-6

Insights into microbial communities mediating the bioremediation of hydrocarbon-contaminated soil from an Alpine former military site
Cited by: 63
Author(s): J.A. Siles, Rosa Margesin
Software Mentions: 4
Published: about 8 years ago

10.1186/s40168-018-0610-5

The bacterial community significantly promotes cast iron corrosion in reclaimed wastewater distribution systems
Cited by: 30
Author(s): Guijuan Zhang, Bing Li, Jie Liu, Mingqiang Luan, Yao Long, Xiaotao Jiang, Ke Yu, Yuntao Guan
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0157442

Dung Beetles along a Tropical Altitudinal Gradient: Environmental Filtering on Taxonomic and Functional Diversity
Cited by: 90
Author(s): Cássio Alencar Nunes, Rodrigo Fagundes Braga, José Eugênio Côrtes Figueira, Frederico S. Neves, G. Wilson Fernandes
Software Mentions: 4
Published: almost 10 years ago

10.1371/journal.pone.0076070

Lineage-Specific Responses of Tooth Shape in Murine Rodents (Murinae, Rodentia) to Late Miocene Dietary Change in the Siwaliks of Pakistan
Cited by: 24
Author(s): Yuri Kimura, Louis L. Jacobs, Lawrence J. Flynn
Software Mentions: 4
Published: over 12 years ago

10.3390/microorganisms9051038

Microbial Hotspots in Lithic Microhabitats Inferred from DNA Fractionation and Metagenomics in the Atacama Desert
Cited by: 15
Author(s): Dirk Schulze‐Makuch, Daniel Lipus, Felix L. Arens, Mickaël Baqué, Till L. V. Bornemann, Jean Pierre Paul de Vera, Markus Flury, Jan Frösler, Jacob Heinz, Yunha Hwang, Samuel P. Kounaves, Kai Mangelsdorf, Rainer U. Meckenstock, Mark Pannekens, Alexander J. Probst, Johan S. Sáenz, Janosch Schirmack, Michael Schloter, Philippe Schmitt‐Kopplin, Bernd Uwe Schneider, Jenny Uhl, Gisle Vestergaard, Bernardita Valenzuela, Pedro Zamorano, Dirk Wagner
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0177145

Microbiomes associated with infective stages of root-knot and lesion nematodes in soil
Cited by: 74
Author(s): Ahmed Elhady, Ariadna Giné, Olivera Topalović, Samuel Jacquiod, Søren J. Sørensen, Francisco Javier Sorribas, Holger Heuer
Software Mentions: 4
Published: about 9 years ago

10.1038/s41598-021-86406-9

Extreme philopatry and genetic diversification at unprecedented scales in a seabird
Cited by: 6
Author(s): D. K. Danckwerts, Laurence Humeau, Patrick Pinet, Christopher D. McQuaid, Matthieu Le Corre
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.4268

Spatiotemporal and demographic variation in the diet of New Zealand lesser short‐tailed bats (<i>Mystacina tuberculata</i>)
Cited by: 19
Author(s): Zenon J. Czenze, Jennifer L. Tucker, Elizabeth L. Clare, Joanne E. Littlefair, David Hemprich‐Bennett, Hernani Oliveira, R. Mark Brigham, Anthony J. R. Hickey, Stuart Parsons
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pone.0236595

Interactions of Segmented Filamentous Bacteria (Candidatus Savagella) and bacterial drivers in colitis-associated colorectal cancer development
Cited by: 4
Author(s): Annie E. Wolfe, Jacob E. Moskowitz, Craig L. Franklin, Timothy Wiemken, Aaron C. Ericsson
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-021-89002-z

Mechanical biofilm disruption causes microbial and immunological shifts in periodontitis patients
Cited by: 24
Author(s): William Johnston, Bob T. Rosier, Alejandro Artacho, Michael Paterson, Krystyna Piela, Christopher Delaney, Jason L. Brown, Gordon Ramage, Álex Mira, Shauna Culshaw
Software Mentions: 4
Published: about 5 years ago

10.1002/mbo3.1190

Age‐associated variation in the gut microbiota of chinstrap penguins (<i>Pygoscelis antarctica</i>) reveals differences in food metabolism
Cited by: 4
Author(s): Jing Tian, Jing Du, Shengjiu Zhang, Yanqiu Li, Xiaoyuan Gao, Jingfeng Han, Zengkui Lu
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0256637

Beta diversity differs among hydrothermal vent systems: Implications for conservation
Cited by: 7
Author(s): Thomas Giguère, Verena Tunnicliffe
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41598-021-83417-4

Soil mite communities (Acari: Mesostigmata) as indicators of urban ecosystems in Bucharest, Romania
Cited by: 9
Author(s): Minodora Manu, Raluca Ioana Băncilă, Constantin-Ciprian Bîrsan, Owen Mountford, Marilena Onete
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-021-83747-3

Testing for phylogenetic signal in claws suggests great influence of ecology on Caribbean intertidal arthropods (Acari, Oribatida)
Cited by: 8
Author(s): Michaela Kerschbaumer, Tobias Pfingstl
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-020-68136-6

Effects of substratum and depth on benthic harmful dinoflagellate assemblages
Cited by: 13
Author(s): Li Keat Lee, Zhen Fei Lim, Haifeng Gu, Leo Lai Chan, R. Wayne Litaker, Patricia A. Tester, Chui Pin Leaw, Po Teen Lim
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-020-61569-z

Microbial community structure and functional properties in permanently and seasonally flooded areas in Poyang Lake
Cited by: 11
Author(s): Yang Liu, Ze Ren, Xiaodong Qu, Min Zhang, Yang Yu, Yuhang Zhang, Wenqi Peng
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-019-46330-5

Geometric morphometrics for the study of facial expressions in non-human animals, using the domestic cat as an exemplar
Cited by: 34
Author(s): Lauren Finka, Stélio Pacca Loureiro Luna, Juliana Tabarelli Brondani, Yorgos Tzimiropoulos, John McDonagh, Mark J. Farnworth, Marcello Ruta, Daniel S. Mills
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0092148

Phylogeography of the Tropical Planktonic Foraminifera Lineage Globigerinella Reveals Isolation Inconsistent with Passive Dispersal by Ocean Currents
Cited by: 40
Author(s): Agnes Weiner, Manuel F. G. Weinkauf, Atsushi Kurasawa, Kate Darling, Michal Kučera, Guido W. Grimm
Software Mentions: 4
Published: about 12 years ago

10.1038/srep16807

Application of density gradient for the isolation of the fecal microbial stool component and the potential use thereof
Cited by: 40
Author(s): Arancha Hevia, Susana Delgado, Abelardo Margollés, Borja Sánchez
Software Mentions: 4
Published: over 10 years ago

10.1098/rsos.202265

The impacts of past, present and future ocean chemistry on predatory planktonic snails
Cited by: 4
Author(s): Deborah Wall-Palmer, Lisette Mekkes, Paula Ramos-Silva, Linda K. Dämmer, Erica Goetze, Karel Bakker, Elza Duijm, Katja T. C. A. Peijnenburg
Software Mentions: 4
Published: almost 5 years ago

10.3390/genes11121503

Seascape Genomics of the Sugar Kelp Saccharina latissima along the North Eastern Atlantic Latitudinal Gradient
Cited by: 14
Author(s): Jaromir Guzinski, Paolo Ruggeri, Marion Ballenghien, Stéphane Mauger, Bertrand Jacquemin, Chloé Jollivet, Jérôme Coudret, Lucie Jaugeon, Christophe Destombe, Myriam Valéro
Software Mentions: 4
Published: over 5 years ago

10.3389/fpsyg.2020.488871

Formal Syntax and Deep History
Cited by: 11
Author(s): Andrea Ceolin, Cristina Guardiano, Monica Alexandrina Irimia, Giuseppe Longobardi
Software Mentions: 4
Published: over 5 years ago

10.3389/fpls.2020.00817

Morphological and Genetic Variation in Monocultures, Forestry Systems and Wild Populations of Agave maximiliana of Western Mexico: Implications for Its Conservation
Cited by: 17
Author(s): Dánae Cabrera-Toledo, Ofelia Vargas‐Ponce, Sabina Ascencio-Ramírez, Luis Mario Valadez-Sandoval, Jessica Pérez‐Alquicira, Judith Morales-Saavedra, Oassis F. Huerta-Galván
Software Mentions: 4
Published: almost 6 years ago

10.3390/plants10030558

Comparison of Genomic Prediction Methods for Yellow, Stem, and Leaf Rust Resistance in Wheat Landraces from Afghanistan
Cited by: 11
Author(s): Muhammad Massub Tehseen, Zakaria Kehel, Carolina Sansaloni, Marta S. Lopes, Ahmed Amri, Ezgi Kurtulus, K. Nazari
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0047879

Simultaneous Amplicon Sequencing to Explore Co-Occurrence Patterns of Bacterial, Archaeal and Eukaryotic Microorganisms in Rumen Microbial Communities
Cited by: 281
Author(s): Sandra Kittelmann, Henning Seedorf, William A. Walters, José C. Clemente, Rob Knight, Jeffrey I. Gordon, Peter H. Janssen
Software Mentions: 4
Published: over 13 years ago

10.3389/fmicb.2018.02590

Two Populations of Mites (Tyrophagus putrescentiae) Differ in Response to Feeding on Feces-Containing Diets
Cited by: 18
Author(s): Jan Hubert, Marta Nešvorná, B. Sopko, Jaroslav Smrž, Pavel B. Klimov, Tomáš Erban
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2020.00198

Under the Christmas Tree: Belowground Bacterial Associations With Abies nordmanniana Across Production Systems and Plant Development
Cited by: 7
Author(s): Adriana M. García-Lemos, Alex Gobbi, Mette Haubjerg Nicolaisen, Lars Hansen, Thomas Roitsch, Bjarke Veierskov, Ole Nybroe
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0209887

Seabird and pinniped shape soil bacterial communities of their settlements in Cape Shirreff, Antarctica
Cited by: 6
Author(s): Lía Ramírez-Fernández, Nicole Trefault, Margarita Carú, Julieta Orlando
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2015.00573

Revealing the unexplored fungal communities in deep groundwater of crystalline bedrock fracture zones in Olkiluoto, Finland
Cited by: 63
Author(s): Elina Sohlberg, Malin Bomberg, Hanna Miettinen, Mari Nyyssönen, Heikki Salavirta, Minna Vikman, Merja Itävaara
Software Mentions: 4
Published: almost 11 years ago

10.1371/journal.pone.0200709

Highly diverse Bronze Age population dynamics in Central-Southern Europe and their response to regional climatic patterns
Cited by: 17
Author(s): Giacomo Capuzzo, Marco Zanon, Marta Dal Corso, Wiebke Kirleis, Juan Antonio Barceló
Software Mentions: 4
Published: almost 8 years ago

10.1098/rspb.2020.3150

Evolutionary versatility of the avian neck
Cited by: 9
Author(s): Ryan D. Marek, Peter L. Falkingham, Roger Benson, James Gardiner, Thomas W. Maddox, Karl T. Bates
Software Mentions: 4
Published: over 5 years ago

10.1038/s41396-018-0059-3

Suppression of the activity of arbuscular mycorrhizal fungi by the soil microbiota
Cited by: 105
Author(s): Nanna Bygvraa Svenningsen, Stephanie J. Watts‐Williams, Erik J. Joner, Fabio Battini, Aikaterini Efthymiou, Carla Cruz-Paredes, Ole Nybroe, Iver Jakobsen
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2018.00149

Bacterial Preferences for Specific Soil Particle Size Fractions Revealed by Community Analyses
Cited by: 81
Author(s): Michael Hemkemeyer, Anja B. Dohrmann, Bent T. Christensen, Christoph C. Tebbe
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2016.02067

Fine Spatial Scale Variation of Soil Microbial Communities under European Beech and Norway Spruce
Cited by: 72
Author(s): Heiko Nacke, Kezia Goldmann, Ingo Schöning, Birgit Pfeiffer, Kristin Kaiser, Genis Castillo-Villamizar, Marion Schrumpf, François Buscot, Rolf Daniel, Tesfaye Wubet
Software Mentions: 4
Published: over 9 years ago

10.3389/fmicb.2020.00650

Fine Resolution Analysis of Microbial Communities Provides Insights Into the Variability of Cocoa Bean Fermentation
Cited by: 21
Author(s): Mauricio Pacheco-Montealegre, Lizeth Lorena Dávila-Mora, Lina Marcela Botero-Rute, Alejandro Reyes, Alejandro Caro‐Quintero
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2019.00006

Fungal Biodiversity of the Most Common Types of Polish Soil in a Long-Term Microplot Experiment
Cited by: 38
Author(s): Jarosław Grządziel, Anna Gałązka
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2016.00820

Microbial Inventory of Deeply Buried Oceanic Crust from a Young Ridge Flank
Cited by: 36
Author(s): Steffen Leth Jørgensen, Rui Zhao
Software Mentions: 4
Published: about 10 years ago

10.1038/s41598-019-40080-0

Morphological, genetic and epigenetic aspects of homoploid hybridization between Salvia officinalis L. and Salvia fruticosa Mill.
Cited by: 15
Author(s): Ivan Radosavljević, Sandro Bogdanović, Ferhat Celep, Maja Filipović, Zlatko Šatović, Boštjan Surina, Zlatko Liber
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2020.00993

The Core Gut Microbiome of Black Soldier Fly (Hermetia illucens) Larvae Raised on Low-Bioburden Diets
Cited by: 71
Author(s): Thomas Klammsteiner, Andreas Walter, Tajda Bogataj, Carina Desirée Heussler, Blaž Stres, Florian M. Steiner, Birgit C. Schlick‐Steiner, Wolfgang Arthofer, Heribert Insam
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2020.562546

Bacterial Communities Are More Sensitive to Water Addition Than Fungal Communities Due to Higher Soil K and Na in a Degraded Karst Ecosystem of Southwestern China
Cited by: 4
Author(s): Muhammad Umair, Ning Sun, Hongmei Du, Nan Hui, Muhammad Altaf, Baoming Du, Shan Yin, Chunjiang Liu
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2015.01478

Potential Activity, Size, and Structure of Sulfate-Reducing Microbial Communities in an Exposed, Grazed and a Sheltered, Non-Grazed Mangrove Stand at the Red Sea Coast
Cited by: 7
Author(s): Melike Balk, Joost A. Keuskamp, Hendrikus J. Laanbroek
Software Mentions: 4
Published: over 10 years ago

10.3390/nu12072147

A Comprehensive Evaluation of the Impact of Bovine Milk Containing Different Beta-Casein Profiles on Gut Health of Ageing Mice
Cited by: 22
Author(s): Barbara Guantario, Marzia Giribaldi, Chiara Devirgiliis, Alberto Finamore, Elena Colombino, Maria Teresa Capucchio, Rocchina Evangelista, Vincenzo Motta, Paola Zinno, Simona Cirrincione, Sara Antoniazzi, Laura Cavallarin, Marianna Roselli
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-018-33162-y

Influence of water quality on diversity and composition of fungal communities in a tropical river
Cited by: 22
Author(s): Mabel Ortiz-Vera, Luiz Ricardo Olchanheski, Eliane Gonçalves da Silva, Felipe Rezende de Lima, Lina Rocío del Pilar Rada Martinez, Maria Inês Zanoli Sato, Rodolfo Jaffé, Ronnie Alves, Simone Ichiwaki, Gabriel Padilla, Welington Luiz Araújo
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-018-20347-8

Characterization of soil bacterial, archaeal and fungal communities inhabiting archaeological human-impacted layers at Monte Iato settlement (Sicily, Italy)
Cited by: 20
Author(s): J.A. Siles, Birgit Öhlinger, Tomáš Cajthaml, Erich Kistler, Rosa Margesin
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2019.02474

Enhanced Microbial Interactions and Deterministic Successions During Anoxic Decomposition of Microcystis Biomass in Lake Sediment
Cited by: 7
Author(s): Yufan Wu, Peng Xing, Shuang‐Jiang Liu, Qinglong L. Wu
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2021.647921

Higher Abundance of Sediment Methanogens and Methanotrophs Do Not Predict the Atmospheric Methane and Carbon Dioxide Flows in Eutrophic Tropical Freshwater Reservoirs
Cited by: 11
Author(s): Gabrielle Maria Fonseca Pierangeli, Mércia Regina Domingues, Tatiane Araújo de Jesus, Lúcia Helena Gomes Coelho, Werner Siegfried Hanisch, Marcelo Luiz Martins Pompêo, Flávia Talarico Saia, Gustavo Bueno Gregoracci, Roseli Frederigi Benassi
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2017.02499

Comparative Metagenomics Reveals the Distinctive Adaptive Features of the Spongia officinalis Endosymbiotic Consortium
Cited by: 36
Author(s): Elham Karimi, Maria João Ramos, Jorge M. S. Gonçalves, Joana R. Xavier, Margarida Reis, Rodrigo Costa
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-017-01126-3

Bioinformatic Approaches Including Predictive Metagenomic Profiling Reveal Characteristics of Bacterial Response to Petroleum Hydrocarbon Contamination in Diverse Environments
Cited by: 106
Author(s): Arghya Mukherjee, Bobby Chettri, James S. Langpoklakpam, Pijush Basak, Aravind Prasad, Ashis K. Mukherjee, Maitree Bhattacharyya, Arvind Singh, Dhrubajyoti Chattopadhyay
Software Mentions: 4
Published: about 9 years ago

10.3389/fmicb.2019.00635

Denitrifying Bacteria Active in Woodchip Bioreactors at Low-Temperature Conditions
Cited by: 31
Author(s): Jeonghwan Jang, Emily L. Anderson, Rodney T. Venterea, Michael J. Sadowsky, Carl J. Rosen, Gary W. Feyereisen, Satoshi Ishii
Software Mentions: 4
Published: about 7 years ago

10.3390/ijms21176067

Long-Term Impact of Chemical and Alternative Fungicides Applied to Grapevine cv Nebbiolo on Berry Transcriptome
Cited by: 7
Author(s): Raffaella Balestrini, Stefano Ghignone, Gabriela Quiroga, Valentina Fiorilli, Irene Romano, Giorgio Gambino
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-017-12265-y

Nutrient quality of vertebrate dung as a diet for dung beetles
Cited by: 46
Author(s): Kevin Frank, Adrian Brückner, Andrea Hilpert, Michael Heethoff, Nico Blüthgen
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2019.01407

Predominance of Cand. Patescibacteria in Groundwater Is Caused by Their Preferential Mobilization From Soils and Flourishing Under Oligotrophic Conditions
Cited by: 143
Author(s): Martina Herrmann, Carl‐Eric Wegner, Martin Taubert, Patricia Geesink, Katharina Lehmann, Lijuan Yan, Robert Lehmann, Kai Uwe Totsche, Kirsten Küsel
Software Mentions: 4
Published: almost 7 years ago

10.3389/fmicb.2019.00473

Variability in the Composition of Pacific Oyster Microbiomes Across Oyster Families Exhibiting Different Levels of Susceptibility to OsHV-1 μvar Disease
Cited by: 44
Author(s): William L. King, Nachshon Siboni, Nathan L. R. Williams, Tim Kahlke, Khue Viet Nguyen, Cheryl Jenkins, Michael Dove, Wayne A. O’Connor, Justin R. Seymour, Maurizio Labbate
Software Mentions: 4
Published: about 7 years ago

10.3389/fmicb.2019.00169

Biogeographic Patterns and Assembly Mechanisms of Bacterial Communities Differ Between Habitat Generalists and Specialists Across Elevational Gradients
Cited by: 43
Author(s): Luo Zhengming, Jinxian Liu, Pengyu Zhao, Tong Jia, Cui Li, Bo Chai
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2019.00908

Bacterioplankton Community Composition Along Environmental Gradients in Lakes From Byers Peninsula (Maritime Antarctica) as Determined by Next-Generation Sequencing
Cited by: 25
Author(s): Antonio Picazo, Carlos Rochera, Juan Antonio Villaescusa, Javier Miralles‐Lorenzo, David Velázquez, Antonio Quesada, Antonio Camacho
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2015.01300

Forest Management Type Influences Diversity and Community Composition of Soil Fungi across Temperate Forest Ecosystems
Cited by: 117
Author(s): Kezia Goldmann, Ingo Schöning, François Buscot, Tesfaye Wubet
Software Mentions: 3
Published: over 10 years ago

10.3389/fmicb.2016.00440

Rhizosphere Microbiomes of European + Seagrasses Are Selected by the Plant, But Are Not Species Specific
Cited by: 113
Author(s): Catarina Cúcio, Aschwin H. Engelen, Rodrigo Costa, Gerard Muyzer
Software Mentions: 3
Published: about 10 years ago

10.3389/fmicb.2021.629169

Targeting the Active Rhizosphere Microbiome of Trifolium pratense in Grassland Evidences a Stronger-Than-Expected Belowground Biodiversity-Ecosystem Functioning Link
Cited by: 15
Author(s): Sara Fareed Mohamed Wahdan, Anna Heintz‐Buschart, Chakriya Sansupa, Benjawan Tanunchai, Yuting Wu, Martin Schädler, Matthias Noll, Witoon Purahong, François Buscot
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-017-15624-x

Influences of anthropogenic land use on microbial community structure and functional potentials of stream benthic biofilms
Cited by: 31
Author(s): Xiaodong Qu, Ze Ren, Haiping Zhang, Min Zhang, Yuhang Zhang, Xiaobo Liu, Wenqi Peng
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2019.00594

High-Throughput Illumina MiSeq Amplicon Sequencing of Yeast Communities Associated With Indigenous Dairy Products From Republics of Benin and Niger
Cited by: 14
Author(s): Philippe Sessou, Santosh Keisam, Ngangyola Tuikhar, Mariama Gagara, Souaïbou Farougou, Kumaraswamy Jeyaram
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2016.00462

Carrageenan Gum and Adherent Invasive Escherichia coli in a Piglet Model of Inflammatory Bowel Disease: Impact on Intestinal Mucosa-associated Microbiota
Cited by: 41
Author(s): Peris M. Munyaka, Shadi Sepehri, Jean–Eric Ghia, Ehsan Khafipour
Software Mentions: 3
Published: about 10 years ago

10.3389/fmicb.2018.01664

Microbial Community Changes in a Chlorinated Solvents Polluted Aquifer Over the Field Scale Treatment With Poly-3-Hydroxybutyrate as Amendment
Cited by: 26
Author(s): Bruna Matturro, Lucia Pierro, Emanuela Frascadore, Marco Petrangeli Papini, Simona Rossetti
Software Mentions: 3
Published: almost 8 years ago

10.3389/fmicb.2018.00002

Transcriptome Analysis of a Bloom-Forming Cyanobacterium Microcystis aeruginosa during Ma-LMM01 Phage Infection
Cited by: 25
Author(s): Daichi Morimoto, Shigeko Kimura, Yoshihiko Sako, Takashi Yoshida
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-26713-w

Effect of different types of olive oil pomace dietary supplementation on the rumen microbial community profile in Comisana ewes
Cited by: 41
Author(s): Federica Mannelli, Alice Cappucci, Francesco Pini, Roberta Pastorelli, Francesca Decorosi, Luciana Giovannetti, Marcello Mele, Sara Minieri, Giuseppe Conte, Mariano Pauselli, Stefano Rapaccini, Carlo Viti, Arianna Buccioni
Software Mentions: 3
Published: about 8 years ago

10.1038/s41598-018-27705-6

Need for focus on microbial species following ice melt and changing freshwater regimes in a Janus Arctic Gateway
Cited by: 17
Author(s): Nathalie Joli, Michel Gosselin, Mathieu Ardyna, Marcel Babin, Deo Florence L. Onda, Jean‐Éric Tremblay, Connie Lovejoy
Software Mentions: 3
Published: almost 8 years ago

10.3389/fmicb.2020.00285

The Distribution of Bathyarchaeota in Surface Sediments of the Pearl River Estuary Along Salinity Gradient
Cited by: 27
Author(s): Dayu Zou, Jie Pan, Zongbao Liu, Chuanlun Zhang, Hongbin Liu, Meng Li
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-018-29307-8

Mineralogical and textural characteristics of nest building geomaterials used by three sympatric mud-nesting hirundine species
Cited by: 9
Author(s): Dimitrios Papoulis, Olga Tzortzakaki, Pavlos Avramidis, Panagiotis Mentis, Paraskevi Lampropoulou, George Iliopoulos
Software Mentions: 3
Published: almost 8 years ago

10.3389/fmicb.2017.02511

Succession of Bacterial Communities in a Seasonally Stratified Lake with an Anoxic and Sulfidic Hypolimnion
Cited by: 42
Author(s): Muhe Diao, Ruben Sinnige, Karsten Kalbitz, Jef Huisman, Gerard Muyzer
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2018.02120

Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
Cited by: 39
Author(s): Witoon Purahong, Tesfaye Wubet, Guillaume Lentendu, Björn Hoppe, Katalee Jariyavidyanont, Tobias Arnstadt, Kristin Baber, Peter Otto, Harald Kellner, Martin Hofrichter, Jürgen Bauhus, Wolfgang W. Weisser, Dirk Krüger, Ernst Detlef Schulze, Tiemo Kahl, François Buscot
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-018-33007-8

Local confinement of disease-related microbiome facilitates recovery of gorgonian sea fans from necrotic-patch disease
Cited by: 14
Author(s): Elena Quintanilla, Catalina Ramírez‐Portilla, Boahemaa Adu-Oppong, Gretchen Walljasper, Stefanie P. Glaeser, Thomas Wilke, Alejandro Reyes, Juan A. Sánchez
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-018-33634-1

Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
Cited by: 24
Author(s): Hongyi Yang, Xingyu Zhao, Changli Liu, Long Bai, Min Zhao, Lili Li
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2018.00076

Fungal Genetics and Functional Diversity of Microbial Communities in the Soil under Long-Term Monoculture of Maize Using Different Cultivation Techniques
Cited by: 29
Author(s): Anna Gałązka, Jarosław Grządziel
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2018.00578

Benthic Algal Community Structures and Their Response to Geographic Distance and Environmental Variables in the Qinghai-Tibetan Lakes With Different Salinity
Cited by: 23
Author(s): Jian Yang, Hongchen Jiang, Wen Liu, Beichen Wang
Software Mentions: 3
Published: about 8 years ago

10.1038/s41598-019-38993-x

Regime shift in fish assemblage structure in the Yangtze River following construction of the Three Gorges Dam
Cited by: 24
Author(s): Xin Gao, Masami Fujiwara, Kirk O. Winemiller, Pengcheng Lin, Mingzheng Li, Huanzhang Liu
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2013.00253

Plant soil interactions alter carbon cycling in an upland grassland soil
Cited by: 22
Author(s): Bruce C. Thomson, Nicholas J. Ostle, Niall P. McNamara, Simon Oakley, Andrew S. Whiteley, Mark Bailey, Robert I. Griffiths
Software Mentions: 3
Published: over 13 years ago

10.3389/fmicb.2017.00715

Relative Abundance and Diversity of Bacterial Methanotrophs at the Oxic–Anoxic Interface of the Congo Deep-Sea Fan
Cited by: 11
Author(s): Sandrine Bessette, Yann Moalic, Sébastien Gautey, Françoise Lesongeur, Anne Godfroy, Laurent Toffin
Software Mentions: 3
Published: about 9 years ago

10.1038/s41598-019-42207-9

Parallel sequencing of porA reveals a complex pattern of Campylobacter genotypes that differs between broiler and broiler breeder chickens
Cited by: 12
Author(s): Frances M. Colles, Stephen G. Preston, Kenneth Klingenberg Barfod, Patrik G. Flammer, Maiden Mcj., Adrian L. Smith
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2017.02319

Taxonomic and Functional Differences between Microbial Communities in Qinghai Lake and Its Input Streams
Cited by: 50
Author(s): Ze Ren, Fang Wang, Xiaodong Qu, James J. Elser, Yang Liu, Limin Chu
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2015.01297

Particle-Associated Differ from Free-Living Bacteria in Surface Waters of the Baltic Sea
Cited by: 132
Author(s): Angelika Rieck, Daniel P. R. Herlemann, Klaus Jürgens, Hans‐Peter Grossart
Software Mentions: 3
Published: over 10 years ago

10.3389/fmicb.2019.02271

Distinct Successions of Common and Rare Bacteria in Soil Under Humic Acid Amendment – A Microcosm Study
Cited by: 30
Author(s): Pengfa Li, Jia Liu, Chunyu Jiang, Meng Wu, Ming Liu, Zhongpei Li
Software Mentions: 3
Published: over 6 years ago

10.3390/ijms21113870

Time-course Transcriptome of Parageobacillus thermoglucosidasius DSM 6285 Grown in the Presence of Carbon Monoxide and Air
Cited by: 5
Author(s): Habibu Aliyu, Teresa Mohr, Don A. Cowan, Pieter De Maayer, Anke Neumann
Software Mentions: 3
Published: about 6 years ago

10.3390/ijms21134634

New Insight into the Composition of Wheat Seed Microbiota
Cited by: 33
Author(s): Agnieszka Kuźniar, Kinga Włodarczyk, Jarosław Grządziel, Małgorzata Woźniak, Karolina Furtak, Anna Gałązka, Ewa Dziadczyk, Ewa Skórzyńska-Polit, Agnieszka Woliñska
Software Mentions: 3
Published: almost 6 years ago

10.1038/srep35507

Historical dimensions of population structure in a continuously distributed marine species: The case of the endemic Chilean dolphin
Cited by: 8
Author(s): María José Pérez‐Álvarez, Carlos Olavarría, Rodrigo Moraga, C. Scott Baker, Rebecca M. Hamner, Élie Poulin
Software Mentions: 3
Published: over 9 years ago

10.3389/fmicb.2019.02907

A New High Throughput Sequencing Assay for Characterizing the Diversity of Natural Vibrio Communities and Its Application to a Pacific Oyster Mortality Event
Cited by: 22
Author(s): William L. King, Nachshon Siboni, Tim Kahlke, Timothy Green, Maurizio Labbate, Justin R. Seymour
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2018.01251

Gut Bacterial Communities of Dendroctonus valens and Monoterpenes and Carbohydrates of Pinus tabuliformis at Different Attack Densities to Host Pines
Cited by: 7
Author(s): Dandan Xu, Letian Xu, Fangyuan Zhou, Bo Wang, Shanshan Wang, Min Lü, Jianghua Sun
Software Mentions: 3
Published: almost 8 years ago

10.3389/fmicb.2016.00426

The Features of Fecal and Ileal Mucosa-Associated Microbiota in Dairy Calves during Early Infection with Mycobacterium avium Subspecies paratuberculosis
Cited by: 42
Author(s): Hooman Derakhshani, Jeroen De Buck, Rienske A.R. Mortier, Herman W. Barkema, Denis O. Krause, Ehsan Khafipour
Software Mentions: 3
Published: about 10 years ago

10.1002/fsn3.2377

Bacterial composition and function during fermentation of Mongolia koumiss
Cited by: 8
Author(s): Yue Wu, Yu Liu, Qimu Gesudu, Juntao Zhang, Zhihong Sun, Halatu Haobisi, Bilige Menghe, Wenjun Liu
Software Mentions: 3
Published: almost 5 years ago

10.1093/aobpla/plaa046

Pollinators drive floral evolution in an Atlantic Forest genus
Cited by: 9
Author(s): Beatriz Neves, Igor Musauer Kessous, Ricardo Loyola de Moura, Dayvid Rodrigues Couto, Camila Martini Zanella, Alexandre Antonelli, Christine D. Bacon, Fabiano Salgueiro, Andrea Costa
Software Mentions: 3
Published: almost 6 years ago

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