Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: PAST

https://packages.ecosyste.ms/registries/bioconductor.org/packages/PAST

Pathway Association Study Tool (PAST)
1 version
Latest release: 7 months ago
4,613 downloads total

Papers Mentioning PAST 2,336

10.1590/1678-4685-GMB-2017-0175
Genetic and phenotypic variability of iris color in Buenos Aires population
Cited by: 10
Author(s): Diana María Hohl, Brenda Bezus, Julia Ratowiecki, Cecilia Inés Catanesi
Software Mentions: 1
Published: about 6 years ago
10.1186/gb-2012-13-6-r41
The multiplicity of divergence mechanisms in a single evolving population
Cited by: 51
Author(s): Ram Maharjan, Thomas Ferenci, Peter R. Reeves, Yang Li, Bin Liu, Lei Wang
Software Mentions: 1
Published: over 12 years ago
10.1186/gm520
Asthmatics with exacerbation during acute respiratory illness exhibit unique transcriptional signatures within the nasal mucosa
Cited by: 27
Author(s): Peter McErlean, Sergejs Berdnikovs, Sílvio Favoreto, Junqing Shen, Assel Biyasheva, Rebecca Barbeau, Christopher J. Eisley, Andrea J. Barczak, Theresa A. Ward, Robert P. Schleimer, David J. Erle, Homer A. Boushey, Pedro C. Avila
Software Mentions: 1
Published: over 10 years ago
10.1002/2016GC006299
Orbitally paced phosphogenesis in <scp>M</scp> editerranean shallow marine carbonates during the middle <scp>M</scp> iocene <scp>M</scp> onterey event
Cited by: 15
Author(s): Gerald Auer, Christoph Hauzenberger, Markus Reuter, Werner E. Piller
Software Mentions: 1
Published: about 8 years ago
10.1186/s13099-019-0292-y
Diagnosing and tracing the pathogens of infantile infectious diarrhea by amplicon sequencing
Cited by: 5
Author(s): Haiyan Liu, Mingzhang Guo, Yuanchunzi Jiang, Yanhua Cao, Qi Qian, Xiaoyun He, Kunlun Huang, Jianwei Zhang, Wentao Xu
Software Mentions: 1
Published: about 5 years ago
10.1016/j.heliyon.2021.e05994
Intraspecific variation of trace elements in the kelp gull (Larus dominicanus): influence of age, sex and location
Cited by: 4
Author(s): Jorge Henrique Pedrobom, Amauri Antônio Menegário, Hendryk Gemeiner, Everton Tiago Sulato, Lucas Pellegrini Elias, Patrícia Pereira Serafini, Claudinei José Rodrigues, André S. Barreto, Marcus Antônio Gonçalves de Araújo Júnior
Software Mentions: 1
Published: over 3 years ago
10.1016/j.heliyon.2020.e04093
The effect of resting morphological lip shape during lip movement: A three-dimensional motion analysis study
Cited by: 1
Author(s): Siti Hajjar Nasir, Hashmat Popat, Stephen Richmond
Software Mentions: 1
Published: almost 4 years ago
10.1016/j.heliyon.2021.e06764
Assessing the WEPP model performance for predicting daily runoff in three terrestrial ecosystems in western Syria
Cited by: 3
Author(s): Safwan Mohammed, Mais Hussien, Karam Alsafadi, Ali Mokhtar, Guido Rianna, Issa Kbibo, Mona Barkat, Swapan Talukdar, Szilárd Szabó, Endre Harsányi
Software Mentions: 1
Published: about 3 years ago
10.1016/j.heliyon.2019.e02719
The effect of rosemary Extract and cold plasma treatments on bacterial community diversity in poultry ground meats
Cited by: 10
Author(s): Hung‐Yueh Yeh, J. Eric Line, Arthur Hinton, Yue Gao, Hong Zhuang
Software Mentions: 1
Published: over 4 years ago
10.1007/s10745-015-9790-9
Wild Edible Plants Used by the Polish Community in Misiones, Argentina
Cited by: 36
Author(s): Monika Kujawska, Łukasz Łuczaj
Software Mentions: 1
Published: over 8 years ago
10.3402/iee.v3i0.19946
Fish and amphibians as potential reservoirs of<i>Mycobacterium ulcerans</i>, the causative agent of Buruli ulcer disease
Cited by: 22
Author(s): Sarah J. Willson, Michael G. Kaufman, Richard W. Merritt, Heather R. Williamson, David M. Malakauskas, M. Eric Benbow
Software Mentions: 1
Published: over 11 years ago
10.1038/srep26495
Decoupled form and function in disparate herbivorous dinosaur clades
Cited by: 55
Author(s): Stephan Lautenschlager, Charlotte A. Brassey, David Button, Paul M. Barrett
Software Mentions: 1
Published: about 8 years ago
10.1038/srep28205
Southern Right Whale (Eubalaena australis) Reproductive Success is Influenced by Krill (Euphausia superba) Density and Climate
Cited by: 86
Author(s): Elisa Seyboth, Karina R. Groch, Luciano Dalla Rosa, Keith Reid, Paulo A. C. Flores, Eduardo R. Secchi
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep29478
Tracing the sources and spatial distribution of organic carbon in subsoils using a multi-biomarker approach
Cited by: 68
Author(s): Gerrit Angst, Stephan John, Carsten W. Mueller, Ingrid Kögel‐Knabner, Janet Rethemeyer
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep30834
The role of vision for navigation in the crown-of-thorns seastar, Acanthaster planci
Cited by: 13
Author(s): Robert Sigl, Sebastian Steibl, Christian Laforsch
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep31083
MtDNA analysis reveals enriched pathogenic mutations in Tibetan highlanders
Cited by: 20
Author(s): Longli Kang, Hou-Feng Zheng, Menghan Zhang, Shi Yan, Lei Li, Lijun Liu, Kai Liu, Houyang Kang, Feng Chen, Lifeng Ma, Zhaoyu Qin, Yi Wang, Xiaofeng Wang, Jin Li
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep25695
Transmission of biology and culture among post-contact Native Americans on the western Great Plains
Cited by: 6
Author(s): Stephen J. Lycett, Noreen von Cramon‐Taubadel
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep33667
Thermal stress depletes energy reserves in Drosophila
Cited by: 83
Author(s): Peter Klepsatel, Martina Gáliková, Yanjun Xu, Ronald P. Kühnlein
Software Mentions: 1
Published: over 7 years ago
10.1038/srep34155
Quantifying the biases in metagenome mining for realistic assessment of microbial ecology of naturally fermented foods
Cited by: 29
Author(s): Santosh Keisam, Wahengbam Romi, Giasuddin Ahmed, Kumaraswamy Jeyaram
Software Mentions: 1
Published: over 7 years ago
10.1038/srep36178
Responses of bacterial community structure and denitrifying bacteria in biofilm to submerged macrophytes and nitrate
Cited by: 65
Author(s): Songhe Zhang, Si Pang, Peifang Wang, Wang Chao, Chuling Guo, Felix Gyawu Addo, Yang Li
Software Mentions: 1
Published: over 7 years ago
10.1038/srep36506
Ultra-low activities of a common radioisotope for permission-free tracking of a drosophilid fly in its natural habitat
Cited by: 4
Author(s): Wolfgang Arthofer, Clemens Decristoforo, Birgit C. Schlick-Steiner, Florian M. Steiner
Software Mentions: 1
Published: over 7 years ago
10.1038/srep37551
The Mediterranean Plastic Soup: synthetic polymers in Mediterranean surface waters
Cited by: 490
Author(s): Giuseppe Suaria, Carlo Giacomo Avio, Annabella Mineo, Gwendolyn L. Lattin, Marcello G. Magaldi, Genuario Belmonte, Charles J. Moore, Francesco Regoli, Stefano Aliani
Software Mentions: 1
Published: over 7 years ago
10.1038/srep38781
Nutrient availability shapes the microbial community structure in sugarcane bagasse compost-derived consortia
Cited by: 48
Author(s): Bruno Luan Mello, Anna Alessi, Simon J. McQueen‐Mason, Neil C. Bruce, Igor Polikarpov
Software Mentions: 1
Published: over 7 years ago
10.1038/srep42083
Clay mineralogical and geochemical proxies of the East Asian summer monsoon evolution in the South China Sea during Late Quaternary
Cited by: 26
Author(s): Quan Chen, Zhifei Liu, Catherine Kissel
Software Mentions: 1
Published: over 7 years ago
10.1038/srep43640
Altered intestinal microbiota in patients with chronic pancreatitis: implications in diabetes and metabolic abnormalities
Cited by: 81
Author(s): Sai Manasa Jandhyala, A. Madhulika, G. Deepika, G. V. Rao, D. Nageshwar Reddy, Chakrapani Subramanyam, Mitnala Sasikala, Rupjyoti Talukdar
Software Mentions: 1
Published: about 7 years ago
10.1038/srep09844
Unlocking nature’s treasure-chest: screening for oleaginous algae
Cited by: 86
Author(s): Stephen P. Slocombe, Qianyi Zhang, Michael E. Ross, Avril Anderson, Naomi J. Thomas, Ángela Lapresa, Cecilia Rad‐Menéndez, Christine Campbell, Kenneth D. Black, Michele S. Stanley, John Day
Software Mentions: 1
Published: almost 9 years ago
10.1038/s41598-017-00701-y
Eastern Mediterranean Mobility in the Bronze and Early Iron Ages: Inferences from Ancient DNA of Pigs and Cattle
Cited by: 22
Author(s): Meirav Meiri, Philipp W. Stockhammer, Nimrod Marom, Guy Bar-Oz, Lidar Sapir‐Hen, Peggy Morgenstern, Stella Macheridis, Baruch Rosen, Dorothée Huchon, Joseph Maran, Israel Finkelstein
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-02295-x
Bioturbation as a key driver behind the dominance of Bacteria over Archaea in near-surface sediment
Cited by: 61
Author(s): Xihan Chen, Thorbjørn Joest Andersen, Yuki Morono, Fumio Inagaki, Bo Barker Jørgensen, Mark A. Lever
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-03636-6
Bioinspired nanocoatings for biofouling prevention by photocatalytic redox reactions
Cited by: 55
Author(s): Priyanka Sathe, Karthik Laxman, Myo Tay Zar Myint, Sergey Dobretsov, Jutta Richter, Joydeep Dutta
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-03933-0
Diversity of endophytic mycobiota of tropical tree Tectona grandis Linn.f.: Spatiotemporal and tissue type effects
Cited by: 32
Author(s): Dheeraj K. Singh, Vijay Kumar Sharma, Jitendra Kumar, Ashish Mishra, Shiv Kumar Verma, Thomas N. Sieber, Ravindra N. Kharwar
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-04245-z
A high resolution melting method for the molecular identification of the potentially toxic diatom Pseudo-nitzschia spp. in the Mediterranean Sea
Cited by: 15
Author(s): Laura Pugliese, Silvia Casabianca, Federico Perini, Francesca Andreoni, Antonella Penna
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-05332-x
A repeat length variation in myo-inositol monophosphatase gene contributes to seed size trait in chickpea
Cited by: 14
Author(s): Vikas Dwivedi, Swarup K. Parida, Debasis Chattopadhyay
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-05992-9
Mapping resistance responses to Sclerotinia infestation in introgression lines of Brassica juncea carrying genomic segments from wild Brassicaceae B. fruticulosa
Cited by: 47
Author(s): Kusum Rana, Chhaya Atri, Manik Gupta, Javed Akhatar, P. Sandhu, Nitin Kumar, Ravinder K. Jaswal, Martin J. Barbetti, S. S. Banga
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-06282-0
Stoichiometry of natural bacterial assemblages from lakes located across an elevational gradient
Cited by: 10
Author(s): Birgit Stenzel, Carina Rofner, María Teresa Pérez, Rubén Sommaruga
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-06273-1
Spatial and temporal changes of parasitic chytrids of cyanobacteria
Cited by: 29
Author(s): Mélanie Gerphagnon, Jonathan Colombet, Delphine Latour, Télesphore Sime-Ngando
Software Mentions: 1
Published: almost 7 years ago