bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.1038/s41598-021-81688-5

Fungal diversity and community structure from coastal and barrier island beaches in the United States Gulf of Mexico
Cited by: 14
Author(s): Allison K. Walker, Brent M. Robicheau
Software Mentions: 16
Published: almost 4 years ago

10.1038/s42003-021-01757-3

Jaw shape and mechanical advantage are indicative of diet in Mesozoic mammals
Cited by: 20
Author(s): Nuria Melisa Morales-García, Pamela G. Gill, Christine M. Janis, Emily J. Rayfield
Software Mentions: 16
Published: over 3 years ago

10.3389/fpls.2021.651936

Unraveling the Relationship Between Seed Yield and Yield-Related Traits in a Diversity Panel of Brassica juncea Using Multi-Traits Mixed Model
Cited by: 13
Author(s): Ranjit Saroj, S. L. Soumya, S. P. Singh, Surya Sankar, Rajat Chaudhary, . Yashpal, Neeru Saini, Sujata Vasudev, Devendra K. Yadava
Software Mentions: 12
Published: over 3 years ago

10.3390/microorganisms8101619

Salt Marsh Elevation Drives Root Microbial Composition of the Native Invasive Grass Elytrigia atherica
Cited by: 6
Author(s): Edisa García Hernández, Elena Baraza, Christian Smit, Matty P. Berg, Joana Falcão Salles
Software Mentions: 11
Published: about 4 years ago

10.1186/s12866-020-02075-0

Environmental parameters and microbial community profiles as indication towards microbial activities and diversity in aquaponic system compartments
Cited by: 11
Author(s): Zala Schmautz, Carlos Espinal, Andrea M. Bohny, Fabio Rezzonico, Ranka Junge, Emmanuel Frossard, Theo H. M. Smits
Software Mentions: 11
Published: almost 4 years ago

10.3389/fmicb.2018.02711

Land-Use Intensity Rather Than Plant Functional Identity Shapes Bacterial and Fungal Rhizosphere Communities
Cited by: 45
Author(s): Ricardo Schöps, Kezia Goldmann, Katharina Herz, Guillaume Lentendu, Ingo Schöning, Helge Bruelheide, Tesfaye Wubet, François Buscot
Software Mentions: 9
Published: about 6 years ago

10.1111/evo.13072

Niche divergence facilitated by fine‐scale ecological partitioning in a recent cichlid fish adaptive radiation
Cited by: 37
Author(s): Antonia G. P. Ford, Lukas Rüber, Jason Newton, Kanchon K. Dasmahapatra, J.D. Balarin, Kristoffer Bruun, Julia J. Day
Software Mentions: 9
Published: about 8 years ago

10.1186/s12983-016-0162-0

Evolution of body morphology and beak shape revealed by a morphometric analysis of 14 Paridae species
Cited by: 28
Author(s): Shimiao Shao, Quan Qing, Tianlong Cai, Gang Song, Yanhua Qu, Fumin Lei
Software Mentions: 9
Published: over 8 years ago

10.1002/ece3.5927

Islands in the desert for cavity‐nesting bees and wasps: Ecology, patterns of diversity, and conservation at oases of Baja California Peninsula
Cited by: 4
Author(s): Armando Falcón‐Brindis, María Luisa Jiménez, Ricardo Rodríguez‐Estrella
Software Mentions: 9
Published: almost 5 years ago

10.1038/s41598-017-04141-6

The Microbiome of Endophytic, Wood Colonizing Bacteria from Pine Trees as Affected by Pine Wilt Disease
Cited by: 53
Author(s): Diogo Neves Proença, Romeu Francisco, Susanne Kublik, Anne Schöler, Gisle Vestergaard, Michael Schloter, Paula V. Morais
Software Mentions: 9
Published: over 7 years ago

10.1002/ece3.6335

High dispersal capacity and biogeographic breaks shape the genetic diversity of a globally distributed reef‐dwelling calcifier
Cited by: 16
Author(s): Martina Prazeres, Raphaël Morard, Thomas E. Roberts, Steve S. Doo, Jamaluddin Jompa, Christiane Schmidt, Marleen Stuhr, Willem Renema, Michal Kučera
Software Mentions: 9
Published: over 4 years ago

10.1038/s41598-019-55706-6

Tailings microbial community profile and prediction of its functionality in basins of tungsten mine
Cited by: 26
Author(s): Ana Paula Chung, Carina Coimbra, Pedro Farias, Romeu Francisco, Rita Branco, Francisco Veiga Simão, Érico Rodrigues Gomes, Alcides Pereira, Maria Cristina Vila, António Fiúza, Martin Steen Mortensen, Søren J. Sørensen, Paula V. Morais
Software Mentions: 8
Published: almost 5 years ago

10.7717/peerj.6263

Variation in wild pea (Pisum sativumsubsp.elatius) seed dormancy and its relationship to the environment and seed coat traits
Cited by: 32
Author(s): Iveta Hradilová, Martin Duchoslav, Jan Brus, Vilém Pechanec, Miroslav Hýbl, Pavel Kopecký, Lucie Smržová, Nikola Štefelová, Tadeáš Vaclávek, Michael Bariotakis, Jitka Machalová, Karel Hron, Stergios Pirintsos, Petr Smýkal
Software Mentions: 8
Published: almost 6 years ago

10.1038/s41598-020-80840-x

Distinct bacterial community structure and composition along different cowpea producing ecoregions in Northeastern Brazil
Cited by: 7
Author(s): Luciana de Sousa Lopes, Lucas William Mendes, Jadson Emanuel Lopes Antunes, Louise Melo de Souza Oliveira, Vânia Maria Maciel Melo, Arthur Prudêncio de Araújo Pereira, Antônio Félix da Costa, José de Paula Oliveira, Cosme Rafael Martínez, Márcia do Vale Barreto Figueiredo, Ademir Sérgio Ferreira de Araújo
Software Mentions: 8
Published: almost 4 years ago

10.3390/microorganisms7120662

Grapevine Phyllosphere Community Analysis in Response to Elicitor Application against Powdery Mildew
Cited by: 17
Author(s): Luca Nerva, Chiara Pagliarani, Massimo Pugliese, M. Monchiero, Solène Gonthier, M. L. Gullino, Giorgio Gambino, Walter Chitarra
Software Mentions: 8
Published: almost 5 years ago

10.1098/rspb.2017.0905

The evolution of dual meat and milk cattle husbandry in Linearbandkeramik societies
Cited by: 43
Author(s): Rosalind Gillis, Lenka Kovačíková, Stéphanie Bréhard, Émilie Guthmann, Ivana Vostrovská, Hana Nohálová, Rose‐Marie Arbogast, László Domboróczki, Joachim Pechtl, Alexander Anders, Arkadiusz Marciniak, Anne Tresset, Jean‐Denis Vigne
Software Mentions: 8
Published: over 7 years ago

10.1128/AEM.02755-17

Microbial Diversity and Putative Opportunistic Pathogens in Dishwasher Biofilm Communities
Cited by: 45
Author(s): Prem K. Raghupathi, Jerneja Zupančič, Asker Brejnrod, Samuel Jacquiod, Kurt Houf, Mette Burmølle, Nina Gunde‐Cimerman, Søren J. Sørensen
Software Mentions: 8
Published: over 6 years ago

10.1371/journal.pone.0196488

Symbols in motion: Flexible cultural boundaries and the fast spread of the Neolithic in the western Mediterranean
Cited by: 31
Author(s): Solange Rigaud, Claire Manen, Íñigo García-Martínez de Lagrán
Software Mentions: 7
Published: over 6 years ago

10.1038/s41396-018-0159-0

Distinct patterns and processes of abundant and rare eukaryotic plankton communities following a reservoir cyanobacterial bloom
Cited by: 346
Author(s): Yuanyuan Xue, Huihuang Chen, Jun Yang, Min Liu, Bangqin Huang, Jun Yang
Software Mentions: 7
Published: over 6 years ago

10.3390/microorganisms9030609

Microbial Succession under Freeze–Thaw Events and Its Potential for Hydrocarbon Degradation in Nutrient-Amended Antarctic Soil
Cited by: 3
Author(s): Hugo Emiliano de Jesus, Renato S. Carreira, Simone S.M. Paiva, Carlos German Massone, Alex Enrich‐Prast, Raquel S. Peixoto, Jorge L. M. Rodrigues, Charles K. Lee, S. Craig Cary, Alexandre Soares Rosado
Software Mentions: 7
Published: over 3 years ago

10.7717/peerj.6197

Carabid community structure in northern China grassland ecosystems: Effects of local habitat on species richness, species composition and functional diversity
Cited by: 24
Author(s): Noëlline Tsafack, François Rebaudo, Hui Wang, D Nagy, Yi Xie, Xinpu Wang, Simone Fattorini
Software Mentions: 7
Published: almost 6 years ago

10.1002/ece3.4009

Adaptive phenotypic plasticity in a clonal invader
Cited by: 29
Author(s): Gerlien Verhaegen, Kyle E. McElroy, Laura Bankers, Maurine Neiman, Martín Haase
Software Mentions: 7
Published: over 6 years ago

10.3389/fmicb.2017.01011

Diversity and Composition of Sulfate-Reducing Microbial Communities Based on Genomic DNA and RNA Transcription in Production Water of High Temperature and Corrosive Oil Reservoir
Cited by: 45
Author(s): Xiaoxiao Li, Jinfeng Liu, Lei Zhou, Serge Maurice Mbadinga, Shi‐Zhong Yang, Ji‐Dong Gu, Bo‐Zhong Mu
Software Mentions: 6
Published: over 7 years ago

10.1038/s42003-019-0610-4

Above-below surface interactions mediate effects of seagrass disturbance on meiobenthic diversity, nematode and polychaete trophic structure
Cited by: 4
Author(s): Francisco J. A. Nascimento, Martin Dahl, Diana Deyanova, Liberatus D. Lyimo, Holly M. Bik, Taruna Schuelke, Tiago José Pereira, Mats Björk, Simon Creer, Martin Gullström
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0162325

Striking Phenotypic Variation yet Low Genetic Differentiation in Sympatric Lake Trout (Salvelinus namaycush)
Cited by: 18
Author(s): Kia Marin, Andrew Coon, Robert Spencer Carson, Paul V. Debes, Dylan J. Fraser
Software Mentions: 6
Published: about 8 years ago

10.3389/fpls.2021.662298

Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics
Cited by: 10
Author(s): Francisca E Gálvez, Mónica Saldarriaga‐Córdoba, Pirjo Huovinen, Andrea X. Silva, Iván Gómez
Software Mentions: 6
Published: over 3 years ago

10.3389/fmicb.2015.01013

Evolutionary history influences the salinity preference of bacterial taxa in wetland soils
Cited by: 65
Author(s): Ember M. Morrissey, Rima B. Franklin
Software Mentions: 6
Published: about 9 years ago

10.1038/s41598-018-20515-w

Exploring coral microbiome assemblages in the South China Sea
Cited by: 24
Author(s): Chunye Lin, Ren Mao Tian, Guowei Zhou, Haoya Tong, Yue Him Wong, Weipeng Zhang, Apple Pui Yi Chui, James Y. Xie, Jian‐Wen Qiu, Put O. Ang, Sheng Liu, Hui Huang, Pei‐Yuan Qian
Software Mentions: 6
Published: almost 7 years ago

10.1038/s41598-019-56049-y

Availability of orchid mycorrhizal fungi on roadside trees in a tropical urban landscape
Cited by: 17
Author(s): Muhammad Izuddin, Amrita Srivathsan, Ai‐Lan Lee, Tim Wing Yam, Edward L. Webb
Software Mentions: 6
Published: almost 5 years ago

10.1186/s40168-021-01031-y

Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
Cited by: 25
Author(s): Tina Keller‐Costa, Asunción Lago‐Lestón, J. Saraiva, Rodolfo Brizola Toscan, Sandra Godinho Silva, Jorge M. S. Gonçalves, Cymon J. Cox, Nikos C. Kyrpides, Ulisses Nunes da Rocha, Rodrigo Costa
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-019-47921-y

Metataxonomic analyses reveal differences in aquifer bacterial community as a function of creosote contamination and its potential for contaminant remediation
Cited by: 9
Author(s): Aline Daniela Lopes Júlio, Ubiana de Cássia Mourão Silva, Julliane Dutra Medeiros, Daniel Morais, Vera Lúcia dos Santos
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-021-81150-6

Welwitschia: Phylogeography of a living fossil, diversified within a desert refuge
Cited by: 10
Author(s): Norbert Jürgens, Imke Oncken, Jens Oldeland, Felicitas Gunter, Barbara Rudolph
Software Mentions: 6
Published: almost 4 years ago

10.3390/microorganisms8121978

Not That Close to Mommy: Horizontal Transmission Seeds the Microbiome Associated with the Marine Sponge Plakina cyanorosea
Cited by: 8
Author(s): Bruno Francesco Rodrigues de Oliveira, Isabelle Rodrigues Lopes, Anna Luiza Bauer Canellas, Guilherme Muricy, Alan D. W. Dobson, Marinella Silva Laport
Software Mentions: 6
Published: almost 4 years ago

10.3390/microorganisms9040699

Configuration of Gut Microbiota Structure and Potential Functionality in Two Teleosts under the Influence of Dietary Insect Meals
Cited by: 26
Author(s): Nikolas Panteli, Maria Mastoraki, Maria Lazarina, Stavros Chatzifotis, Eleni Mente, Konstantinos Ar. Kormas, Efthimia Antonopoulou
Software Mentions: 6
Published: over 3 years ago

10.1186/s12864-019-5797-8

Concurrent and long-term associations between the endometrial microbiota and endometrial transcriptome in postpartum dairy cows
Cited by: 13
Author(s): S.G. Moore, Aaron C. Ericsson, Susanta K. Behura, W. R. Lamberson, Timothy J. Evans, Matthew S. McCabe, S.E. Poock, M.C. Lucy
Software Mentions: 6
Published: over 5 years ago

10.3389/fmicb.2020.594890

Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
Cited by: 6
Author(s): Zhihui Yang, Qing Yao, Honghui Zhu
Software Mentions: 6
Published: about 4 years ago

10.7717/peerj.5467

Unveiling community patterns and trophic niches of tropical and temperate ants using an integrative framework of field data, stable isotopes and fatty acids
Cited by: 17
Author(s): Félix Baumgarten Rosumek, Nico Blüthgen, Adrian Brückner, Florian Menzel, Gerhard Gebauer, Michael Heethoff
Software Mentions: 6
Published: over 6 years ago

10.3389/fmicb.2018.00294

Drought Legacy Effects on the Composition of Soil Fungal and Prokaryote Communities
Cited by: 108
Author(s): Annelein Meisner, Samuel Jacquiod, L. Basten Snoek, Freddy C. ten Hooven, Wim H. van der Putten
Software Mentions: 6
Published: over 6 years ago

10.3389/fmicb.2020.00390

Response of Tomato Rhizosphere Bacteria to Root-Knot Nematodes, Fenamiphos and Sampling Time Shows Differential Effects on Low Level Taxa
Cited by: 3
Author(s): Mariantonietta Colagiero, Laura Cristina Rosso, Domenico Catalano, Leonardo Schena, Aurelio Ciancio
Software Mentions: 6
Published: over 4 years ago

10.1128/mSystems.00550-21

Competitiveness for Nodule Colonization in Sinorhizobium meliloti: Combined In Vitro -Tagged Strain Competition and Genome-Wide Association Analysis
Cited by: 5
Author(s): Agnese Bellabarba, Giovanni Bacci, Francesca Decorosi, Erki Aun, Elisa Azzarello, Maido Remm, Luciana Giovannetti, Carlo Viti, Alessio Mengoni, Francesco Pini
Software Mentions: 6
Published: about 3 years ago

10.1371/journal.pone.0025630

Leaf Morphology, Taxonomy and Geometric Morphometrics: A Simplified Protocol for Beginners
Cited by: 284
Author(s): Vincenzo Viscosi, Andrea Cardini
Software Mentions: 6
Published: about 13 years ago

10.3389/fmicb.2019.00618

Metagenomic Insights Into a Cellulose-Rich Niche Reveal Microbial Cooperation in Cellulose Degradation
Cited by: 32
Author(s): Jin-Ming Cui, Guoqin Mai, Zuowei Wang, Quan Liu, Yan Zhou, Yingfei Ma, Chenli Liu
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-021-85829-8

Nitrogen has a greater influence than phosphorus on the diazotrophic community in two successive crop seasons in Northeast China
Cited by: 4
Author(s): Jing Zhou, Mingchao Ma, Dawei Guan, Xin Jiang, Nianxin Zhang, Fengyue Shu, Yong Kong, Jun Li
Software Mentions: 6
Published: over 3 years ago

10.3389/fmicb.2020.01405

Denosumab Regulates Gut Microbiota Composition and Cytokines in Dinitrobenzene Sulfonic Acid (DNBS)-Experimental Colitis
Cited by: 7
Author(s): Azin Khafipour, Nour Eissa, Peris M. Munyaka, Mohammad Fazle Rabbi, Kunal Kapoor, Laëtitia Kermarrec, Ehsan Khafipour, Çharles N. Bernstein, Jean–Eric Ghia
Software Mentions: 6
Published: over 4 years ago

10.7717/peerj.997

Deep sequencing of the viralphoHgene reveals temporal variation, depth-specific composition, and persistent dominance of the same viralphoHgenes in the Sargasso Sea
Cited by: 34
Author(s): Dawn B. Goldsmith, Rachel Parsons, Damitu Beyene, Peter Salamon, Mya Breitbart
Software Mentions: 6
Published: over 9 years ago

10.12688/f1000research.10232.1

Approaches to R education in Canadian universities
Cited by: 2
Author(s): M. A. Carson, Nathan Basiliko
Software Mentions: 6
Published: almost 8 years ago

10.1038/s41598-020-57798-x

Impact of the early-life skin microbiota on the development of canine atopic dermatitis in a high-risk breed birth cohort
Cited by: 8
Author(s): Sabrina Rodriguez‐Campos, Ana Rostaher, Lena Zwickl, Nina Fischer, Isabelle Brodard, Sara Vidal, Bernd W. Brandt, Claude Favrot, Vincent Perreten
Software Mentions: 5
Published: almost 5 years ago

10.1038/srep22343

Microspatial variability in community structure and photophysiology of calcified macroalgal microbiomes revealed by coupling of hyperspectral and high-resolution fluorescence imaging
Cited by: 22
Author(s): Rupert Perkins, Christopher Williamson, Juliet Brodie, Laurent Barillé, Patrick Launeau, Johann Lavaud, Marian L. Yallop, Bruno Jesus
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pntd.0007361

Host species and site of collection shape the microbiota of Rift Valley fever vectors in Kenya
Cited by: 3
Author(s): David P. Tchouassi, Ephantus J. Muturi, Samwel O. Arum, Chang‐Hyun Kim, Christopher J. Fields, Baldwyn Torto
Software Mentions: 5
Published: over 5 years ago

10.3389/fmicb.2019.02587

Complementary DNA/RNA-Based Profiling: Characterization of Corrosive Microbial Communities and Their Functional Profiles in an Oil Production Facility
Cited by: 15
Author(s): Silvia J. Salgar-Chaparro, Laura L. Machuca
Software Mentions: 5
Published: about 5 years ago

10.3390/insects10110391

Do Host Plant and Associated Ant Species Affect Microbial Communities in Myrmecophytes?
Cited by: 5
Author(s): Mario X. Ruiz-González, Céline Leroy, Alain Déjean, Hervé Gryta, Patricia Jargeat, Angelo D. Armijos Carrión, Jérôme Orivel
Software Mentions: 5
Published: about 5 years ago

10.3389/fmicb.2021.569020

Distribution of Hydrogen-Producing Bacteria in Tibetan Hot Springs, China
Cited by: 3
Author(s): Li Ma, Geng Wu, Jian Yang, Liuqin Huang, Dorji Phurbu, Wenjun Li, Hongchen Jiang
Software Mentions: 5
Published: over 3 years ago

10.7717/peerj.10463

Diversity of microbes colonizing forages of varying lignocellulose properties in the sheep rumen
Cited by: 13
Author(s): Mohammad Farhad Vahidi, Javad Gharechahi, Mehrdad Behmanesh, Xuezhi Ding, Jianlin Han, Ghasem Hosseini Salekdeh
Software Mentions: 5
Published: almost 4 years ago

10.3389/fbioe.2020.604838

Response of Microbial Community to Induced Failure of Anaerobic Digesters Through Overloading With Propionic Acid Followed by Process Recovery
Cited by: 15
Author(s): Azin Khafipour, Elsie M. Jordaan, Daniel Flores-Orozco, Ehsan Khafipour, David B. Levin, Richard Sparling
Software Mentions: 5
Published: almost 4 years ago

10.3389/fmicb.2016.02143

Linking Peripartal Dynamics of Ruminal Microbiota to Dietary Changes and Production Parameters
Cited by: 37
Author(s): Hooman Derakhshani, Hein Min Tun, F.C. Cardoso, J.C. Plaizier, Ehsan Khafipour, Juan J. Loor
Software Mentions: 5
Published: almost 8 years ago

10.1186/s12866-016-0885-2

The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories
Cited by: 41
Author(s): François-Joël Gatesoupe, Christine Huelvan, Nicolas Le Bayon, Hervé Le Delliou, Lauriane Madec, Olivier Mouchel, Patrick Quazuguel, David Mazurais, José‐Luis Zambonino-Infante
Software Mentions: 5
Published: about 8 years ago

10.3390/microorganisms9020262

Bacterial Diversity and Community Composition Distribution in Cold-Desert Habitats of Qinghai–Tibet Plateau, China
Cited by: 7
Author(s): Wei Zhang, Ali Bahadur, Wasim Sajjad, Gaosen Zhang, Fahad Nasir, Binglin Zhang, Xiukun Wu, Guangxiu Lu, Tuo Chen
Software Mentions: 5
Published: almost 4 years ago

10.3389/fmicb.2019.03138

Rare Species Shift the Structure of Bacterial Communities Across Sphagnum Compartments in a Subalpine Peatland
Cited by: 13
Author(s): Wen Tian, Xiang Xiao, Liyuan Ma, Stephanie Evers, Ruicheng Wang, Xuan Qiu, Hongmei Wang
Software Mentions: 5
Published: almost 5 years ago

10.3389/fmicb.2016.01703

Alteration of Fecal Microbiota Profiles in Juvenile Idiopathic Arthritis. Associations with HLA-B27 Allele and Disease Status
Cited by: 53
Author(s): Monica Di Paola, Duccio Cavalieri, Davide Albanese, M. Sordo, Massimo Pindo, Claudio Donati, Ilaria Pagnini, Teresa Giani, Gabriele Simonini, Alessia Paladini, Paolo Lionetti, Carlotta De Filippo, Rolando Cimaz
Software Mentions: 5
Published: about 8 years ago

10.1186/1471-2148-13-233

True lemurs…true species - species delimitation using multiple data sources in the brown lemur complex
Cited by: 31
Author(s): Matthias Markolf, Hanitriniaina Rakotonirina, Claudia Fichtel, Phillip von Grumbkow, Markus Brameier, Peter M. Kappeler
Software Mentions: 5
Published: almost 12 years ago

10.1128/AEM.02969-19

Different Effects of Soil Fertilization on Bacterial Community Composition in the Penicillium canescens Hyphosphere and in Bulk Soil
Cited by: 12
Author(s): Yuan Zhang, Xiuli Hao, Adriana M. García-Lemos, Inês Nunes, Mette Haubjerg Nicolaisen, Ole Nybroe
Software Mentions: 5
Published: over 4 years ago

10.3389/fmicb.2017.01120

The Arbuscular Mycorrhizal Fungus Funneliformis mosseae Alters Bacterial Communities in Subtropical Forest Soils during Litter Decomposition
Cited by: 31
Author(s): Heng Gui, Witoon Purahong, Kevin D. Hyde, Jianchu Xu, Peter E. Mortimer
Software Mentions: 5
Published: over 7 years ago

10.1038/s41396-019-0518-5

Density-dependent oxylipin production in natural diatom communities: possible implications for plankton dynamics
Cited by: 18
Author(s): Ennio Russo, Giuliana d’Ippolito, Angelo Fontana, Diana Sarno, Domenico D’Alelio, Greta Busseni, Adrianna Ianora, Eric von Elert, Ylenia Carotenuto
Software Mentions: 5
Published: about 5 years ago

10.7554/eLife.64317

Evolutionary shifts in taste coding in the fruit pest Drosophila suzukii
Cited by: 33
Author(s): Hany K.M. Dweck, Gaëlle J.S. Talross, Wanyue Wang, John R. Carlson
Software Mentions: 5
Published: almost 4 years ago

10.1371/journal.pone.0243446

Genomic and morphological evidence of distinct populations in the endemic common (weedy) seadragon Phyllopteryx taeniolatus (Syngnathidae) along the east coast of Australia
Cited by: 9
Author(s): O. Selma Klanten, Michelle R. Gaither, Samuel E. Greaves, Kade Mills, Kristine O’Keeffe, John Turnbull, Rob McKinnon, David J. Booth
Software Mentions: 5
Published: almost 4 years ago

10.1186/s40168-018-0430-7

Seasonal and algal diet-driven patterns of the digestive microbiota of the European abalone Haliotis tuberculata, a generalist marine herbivore
Cited by: 41
Author(s): Angélique Gobet, Laëtitia Mest, Morgan Perennou, Simon M. Dittami, Claire Caralp, Céline Coulombet, Sylvain Huchette, Sabine Roussel, Gurvan Michel, Catherine Leblanc
Software Mentions: 5
Published: over 6 years ago

10.3390/ani10122317

Traditional Usage of Wild Fauna among the Local Inhabitants of Ladakh, Trans-Himalayan Region
Cited by: 16
Author(s): Shiekh Marifatul Haq, Eduardo Soares Calixto, Umer Yaqoob, Riyaz Ahmed, Ahmed Hossam Mahmoud, Rainer W. Bussmann, Osama B. Mohammed, Khalid Ahmad, Arshad Mehmood Abbasi
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-020-80829-6

Empirical evidence for concerted evolution in the 18S rDNA region of the planktonic diatom genus Chaetoceros
Cited by: 5
Author(s): Danièle De Luca, Wiebe H. C. F. Kooistra, Diana Sarno, Elio Biffali, Roberta Piredda
Software Mentions: 5
Published: almost 4 years ago

10.1371/journal.pone.0147004

A Pine Is a Pine and a Spruce Is a Spruce – The Effect of Tree Species and Stand Age on Epiphytic Lichen Communities
Cited by: 27
Author(s): Sofia Bäcklund, Mari Jönsson, Joachim Strengbom, Andreas Frisch, Göran Thor
Software Mentions: 5
Published: almost 9 years ago

10.1371/journal.pone.0239485

Does behavioral thermal tolerance predict distribution pattern and habitat use in two sympatric Neotropical frogs?
Cited by: 9
Author(s): Juan C. Díaz‐Ricaurte, Filipe C. Serrano, Estefany Carolíne Guevara-Molina, Cybele de Oliveira Araújo, Marcio Roberto Martins
Software Mentions: 5
Published: about 4 years ago

10.1128/mSphere.00005-17

Divergent Relationships between Fecal Microbiota and Metabolome following Distinct Antibiotic-Induced Disruptions
Cited by: 28
Author(s): Jocelyn M. Choo, Tokuwa Kanno, Nur Masirah M. Zain, Lex E. X. Leong, Guy C. J. Abell, Julie Keeble, Kenneth D. Bruce, A. James Mason, Geraint B. Rogers
Software Mentions: 5
Published: almost 8 years ago

10.3389/fmicb.2018.02096

Abundant and Rare Microbial Biospheres Respond Differently to Environmental and Spatial Factors in Tibetan Hot Springs
Cited by: 32
Author(s): Yanmin Zhang, Geng Wu, Hongchen Jiang, Jian Yang, Weiyu She, Inayat Mustafa Khan, Wenjun Li
Software Mentions: 5
Published: about 6 years ago

10.1002/ece3.1015

Crater lake cichlids individually specialize along the benthic–limnetic axis
Cited by: 39
Author(s): Henrik Kusche, Hans Recknagel, Axel Meyer
Software Mentions: 5
Published: over 10 years ago

10.1002/ece3.2454

Root exudate cocktails: the link between plant diversity and soil microorganisms?
Cited by: 154
Author(s): Katja Steinauer, Antonis Chatzinotas, Nico Eisenhauer
Software Mentions: 5
Published: about 8 years ago

10.1038/s42003-020-0914-4

Birds have peramorphic skulls, too: anatomical network analyses reveal oppositional heterochronies in avian skull evolution
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Author(s): Olivia Plateau, Christian Foth
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0098536

The Evolution of Morphospace in Phytophagous Scarab Chafers: No Competition - No Divergence?
Cited by: 21
Author(s): Jonas Eberle, Renier Myburgh, Dirk Ahrens
Software Mentions: 5
Published: over 10 years ago

10.3390/genes10110905

MicroRNAs in Vitis vinifera cv. Chardonnay Are Differentially Expressed in Response to Diaporthe Species
Cited by: 5
Author(s): Aleš Eichmeier, Tomáš Kiss, Eliška Peňázová, Jakub Pečenka, Akila Berraf-Tebbal, Miroslav Baránek, Robert Pokluda, Jana Čechová, David Gramaje, Dariusz Grzebelus
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pone.0255290

High-density DArT-based SilicoDArT and SNP markers for genetic diversity and population structure studies in cassava (Manihot esculenta Crantz)
Cited by: 7
Author(s): Bright Gyamfi Adu, R. Akromah, Stephen Amoah, Daniel Nyadanu, Alex Yeboah, L. M. Aboagye, R. Adu Amoah, Eva Gyamfuaa Owusu
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-017-00223-7

Weaning age influences the severity of gastrointestinal microbiome shifts in dairy calves
Cited by: 78
Author(s): S. J. Meale, S. C. Li, Paula Azevedo, Hooman Derakhshani, T.J. DeVries, J.C. Plaizier, M.A. Steele, Ehsan Khafipour
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-017-16375-5

Comparative metagenomics of hydrocarbon and methane seeps of the Gulf of Mexico
Cited by: 45
Author(s): Adrien Vigneron, Eric Alsop, Perrine Cruaud, Gwenaelle Philibert, Benjamin L. King, Leslie Baksmaty, D. A. Lavallée, Bart P. Lomans, Nikos C. Kyrpides, Ian M. Head, Nicolas Tsesmetzis
Software Mentions: 5
Published: about 7 years ago

10.3389/fmicb.2019.00798

Soil Bacterial Function Associated With Stylo (Legume) and Bahiagrass (Grass) Is Affected More Strongly by Soil Chemical Property Than by Bacterial Community Composition
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Author(s): Zhihui Yang, Yongqiang Qin, Xiaodi Liu, Feng Zhang, Honghui Zhu, Qing Yao
Software Mentions: 5
Published: over 5 years ago

10.1002/ece3.7466

Turning to the dark side: LED light at night alters the activity and species composition of a foraging bat assemblage in the northeastern United States
Cited by: 5
Author(s): Chad L. Seewagen, Amanda M. Adams
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.4268

Spatiotemporal and demographic variation in the diet of New Zealand lesser short‐tailed bats (Mystacina tuberculata)
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Author(s): Zenon J. Czenze, Jennifer L. Tucker, Elizabeth L. Clare, Joanne E. Littlefair, David Hemprich‐Bennett, Hernani Oliveira, R. Mark Brigham, Anthony J. R. Hickey, Stuart Parsons
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.7168

Rise and fall of †Pycnodontiformes: Diversity, competition and extinction of a successful fish clade
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Author(s): John Joseph Cawley, Giuseppe Marramà, Giorgio Carnevale, Jaime A. Villafaña, Faviel A. López‐Romero, Jürgen Kriwet
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-019-40080-0

Morphological, genetic and epigenetic aspects of homoploid hybridization between Salvia officinalis L. and Salvia fruticosa Mill.
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Author(s): Ivan Radosavljević, Sandro Bogdanović, Ferhat Celep, Maja Filipović, Zlatko Šatović, Boštjan Surina, Zlatko Liber
Software Mentions: 4
Published: over 5 years ago

10.3390/nu12072147

A Comprehensive Evaluation of the Impact of Bovine Milk Containing Different Beta-Casein Profiles on Gut Health of Ageing Mice
Cited by: 22
Author(s): Barbara Guantario, Marzia Giribaldi, Chiara Devirgiliis, Alberto Finamore, Elena Colombino, Maria Teresa Capucchio, Rocchina Evangelista, Vincenzo Motta, Paola Zinno, Simona Cirrincione, Sara Antoniazzi, Laura Cavallarin, Marianna Roselli
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-018-33162-y

Influence of water quality on diversity and composition of fungal communities in a tropical river
Cited by: 22
Author(s): Mabel Ortiz-Vera, Luiz Ricardo Olchanheski, Eliane Gonçalves da Silva, Felipe Rezende de Lima, Lina Rocío del Pilar Rada Martinez, Maria Inês Zanoli Sato, Rodolfo Jaffé, Ronnie Alves, Simone Ichiwaki, Gabriel Padilla, Welington Luiz Araújo
Software Mentions: 4
Published: about 6 years ago

10.3390/ijms21176067

Long-Term Impact of Chemical and Alternative Fungicides Applied to Grapevine cv Nebbiolo on Berry Transcriptome
Cited by: 7
Author(s): Raffaella Balestrini, Stefano Ghignone, Gabriela Quiroga, Valentina Fiorilli, Irene Romano, Giorgio Gambino
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2020.00198

Under the Christmas Tree: Belowground Bacterial Associations With Abies nordmanniana Across Production Systems and Plant Development
Cited by: 7
Author(s): Adriana M. García-Lemos, Alex Gobbi, Mette Haubjerg Nicolaisen, Lars Hansen, Thomas Roitsch, Bjarke Veierskov, Ole Nybroe
Software Mentions: 4
Published: over 4 years ago

10.1002/ece3.7760

Balancing selection, genetic drift, and human‐mediated introgression interplay to shape MHC (functional) diversity in Mediterranean brown trout
Cited by: 6
Author(s): Lorenzo Talarico, Silvio Marta, Anna Rita Rossi, Simone Di Crescenzo, Gerardo Petrosino, Marco Martinoli, Lorenzo Tancioni
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.7158

Among‐individual diet variation within a lake trout ecotype: Lack of stability of niche use
Cited by: 4
Author(s): Louise Chavarie, Kimberly L. Howland, Les N. Harris, Colin P. Gallagher, Michael J. Hansen, William M. Tonn, Andrew M. Muir, Charles C. Krueger
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-017-01126-3

Bioinformatic Approaches Including Predictive Metagenomic Profiling Reveal Characteristics of Bacterial Response to Petroleum Hydrocarbon Contamination in Diverse Environments
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Author(s): Arghya Mukherjee, Bobby Chettri, James S. Langpoklakpam, Pijush Basak, Aravind Prasad, Ashis K. Mukherjee, Maitree Bhattacharyya, Arvind Singh, Dhrubajyoti Chattopadhyay
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0092148

Phylogeography of the Tropical Planktonic Foraminifera Lineage Globigerinella Reveals Isolation Inconsistent with Passive Dispersal by Ocean Currents
Cited by: 40
Author(s): Agnes Weiner, Manuel F. G. Weinkauf, Atsushi Kurasawa, Kate Darling, Michal Kučera, Guido W. Grimm
Software Mentions: 4
Published: over 10 years ago

10.1038/s41598-018-20347-8

Characterization of soil bacterial, archaeal and fungal communities inhabiting archaeological human-impacted layers at Monte Iato settlement (Sicily, Italy)
Cited by: 20
Author(s): J.A. Siles, Birgit Öhlinger, Tomáš Cajthaml, Erich Kistler, Rosa Margesin
Software Mentions: 4
Published: almost 7 years ago

10.3390/genes11121503

Seascape Genomics of the Sugar Kelp Saccharina latissima along the North Eastern Atlantic Latitudinal Gradient
Cited by: 14
Author(s): Jaromir Guzinski, Paolo Ruggeri, Marion Ballenghien, Stéphane Mauger, Bertrand Jacquemin, Chloé Jollivet, Jérôme Coudret, Lucie Jaugeon, Christophe Destombe, Myriam Valéro
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0199132

Effects of low dose silver nanoparticle treatment on the structure and community composition of bacterial freshwater biofilms
Cited by: 23
Author(s): Alexandra Grün, Constantin Benjamin App, Andreas Breidenbach, Jutta Meier, George Metreveli, Gabriele E. Schaumann, Werner Manz
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0257961

Bacterial community structure of early-stage biofilms is dictated by temporal succession rather than substrate types in the southern coastal seawater of India
Cited by: 15
Author(s): T.J. Sushmitha, Meora Rajeev, P. Sriyutha Murthy, Sangita Ganesh, Subba Rao Toleti, Shunmugiah Karutha Pandian
Software Mentions: 4
Published: about 3 years ago

10.3389/fpsyg.2020.488871

Formal Syntax and Deep History
Cited by: 11
Author(s): Andrea Ceolin, Cristina Guardiano, Monica Alexandrina Irimia, Giuseppe Longobardi
Software Mentions: 4
Published: almost 4 years ago

10.1038/s42003-019-0521-4

Multi-omic analysis in transgenic mice implicates omega-6/omega-3 fatty acid imbalance as a risk factor for chronic disease
Cited by: 49
Author(s): Kanakaraju Kaliannan, Xiangyong Li, Bin Wang, Qian Pan, Chih-Yu Chen, Lei Hao, Shanfu Xie, Jing Kang
Software Mentions: 4
Published: over 5 years ago

10.3389/fpls.2020.00817

Morphological and Genetic Variation in Monocultures, Forestry Systems and Wild Populations of Agave maximiliana of Western Mexico: Implications for Its Conservation
Cited by: 17
Author(s): Dánae Cabrera-Toledo, Ofelia Vargas‐Ponce, Sabina Ascencio-Ramírez, Luis Mario Valadez-Sandoval, Jessica Pérez‐Alquicira, Judith Morales-Saavedra, Oassis F. Huerta-Galván
Software Mentions: 4
Published: over 4 years ago

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