Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/microorganisms8101619

https://doi.org/10.3390/microorganisms8101619

Cited by: 6
Author(s): Edisa García Hernández, Elena Baraza, Christian Smit, Matty P. Berg, Joana Falcão Salles
Published: over 3 years ago

Software Mentions 11

bioconductor: PAST
Pathway Association Study Tool (PAST)
Papers that mentioned: 2,336
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ARTool
Aligned Rank Transform
Papers that mentioned: 47
cran: emmeans
Estimated Marginal Means, aka Least-Squares Means
Papers that mentioned: 1,009
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: ggplot
ggplot for python
Papers that mentioned: 796
pypi: mctools
Python implementations of common Minecraft protocols.
Papers that mentioned: 2
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105