Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: DirichletMultinomial
https://packages.ecosyste.ms/registries/bioconductor.org/packages/DirichletMultinomial
Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data
1 version
Latest release: 10 months ago
4 dependent packages
197,456 downloads total
Papers Mentioning DirichletMultinomial 9
10.1038/s41598-020-59849-9
Response of the human gut and saliva microbiome to urbanization in CameroonCited by: 25
Author(s): Ana Lokmer, Sophie Aflalo, Norbert Amougou, Sophie Lafosse, Alain Froment, Francis Ekwin Tabe, Mathilde Poyet, Mathieu Groussin, Rihlat Saïd-Mohamed, Laure Ségurel
Software Mentions: 14
Published: over 4 years ago
10.1186/s13073-021-00893-z
Destination shapes antibiotic resistance gene acquisitions, abundance increases, and diversity changes in Dutch travelersCited by: 18
Author(s): Alaric W. D’Souza, Manish Boolchandani, Sanket Patel, Gianluca Galazzo, Jarne M. van Hattem, Maris S Arcilla, Damian C. Melles∗, Menno D. de Jong, Constance Schultsz, Gautam Dantas, John Penders
Software Mentions: 13
Published: about 3 years ago
10.1186/s40168-020-00869-y
Topography of the respiratory tract bacterial microbiota in cattleCited by: 36
Author(s): Christopher McMullen, Trevor W. Alexander, Renaud Léguillette, Matthew L. Workentine, Edouard Timsit
Software Mentions: 7
Published: about 4 years ago
10.1186/s40168-016-0218-6
The gut microbiota in conventional and serrated precursors of colorectal cancerCited by: 160
Author(s): Brandilyn A. Peters, Christine Dominianni, Jean A. Shapiro, Timothy R. Church, Jing Wu, George Miller, Elizabeth Yuen, Hal Freiman, Ian Lustbader, James Salik, Charles Friedlander, Richard B. Hayes, Jiyoung Ahn
Software Mentions: 6
Published: over 7 years ago
10.1007/s10096-020-04049-6
The vaginal microbiota in the course of bacterial vaginosis treatmentCited by: 7
Author(s): Romy D. Zwittink, Ellen H A van den Munckhof, Maurine A. Leverstein–van Hall, Kim E. Boers, Anco Molijn, Cornelis W. Knetsch, Ed J. Kuijper
Software Mentions: 5
Published: almost 4 years ago
10.1080/20002297.2020.1746494
Co-occurrence of yeast, streptococci, dental decay, and gingivitis in the post-partum period: results of a longitudinal studyCited by: 6
Author(s): Kirtana Ramadugu, Freida Blostein, Deesha Bhaumik, Wenwen Jiang, Elyse Davis, Elizabeth Salzman, Usha Srinivasan, Carl F. Marrs, Katherine Neiswanger, Daniel W. McNeil, Mary L. Marazita, Betsy Foxman
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pone.0207898
The respiratory microbiome and susceptibility to influenza virus infectionCited by: 68
Author(s): Kyu Han Lee, Aubree Gordon, Kerby Shedden, Guillermina Kuan, Sophia Ng, Ángel Balmaseda, Betsy Foxman
Software Mentions: 3
Published: over 5 years ago
10.3389/fcimb.2020.00403
How to Count Our Microbes? The Effect of Different Quantitative Microbiome Profiling ApproachesCited by: 50
Author(s): Gianluca Galazzo, Niels van Best, Birke J. Benedikter, Kevin Janssen, Liene Bervoets, Christel Driessen, Melissa Oomen, Mayk Lucchesi, Pascalle H. van Eijck, Heike E. F. Becker, Mathias W. Hornef, Paul H. M. Savelkoul, Frank R. M. Stassen, Petra Wolffs, John Penders
Software Mentions: 2
Published: almost 4 years ago
10.3389/fvets.2020.584561
Early Life Inoculation With Adult-Derived Microbiota Accelerates Maturation of Intestinal Microbiota and Enhances NK Cell Activation in Broiler ChickensCited by: 21
Author(s): Nathalie Meijerink, Jannigje G. Kers, Francisca C. Velkers, Daphne A. van Haarlem, D.M. Lamot, J. E. de Oliveira, Hauke Smidt, J.A. Stegeman, Victor P.M.G. Rutten, Christine A. Jansen
Software Mentions: 1
Published: over 3 years ago