10.1186/s12864-015-1635-9

Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection
Cited by: 72
Author(s): James E. Koltes, Eric R. Fritz-Waters, Christopher J. Eisley, Igseo Choi, Hua Bao, Arun Kommadath, Nick V. L. Serão, Nicholas Boddicker, Samuel M. Abrams, Martine Schroyen, Hyelee Loyd, Christopher K. Tuggle, Graham Plastow, Leluo Guan, Paul Stothard, Joan K. Lunney, Peng Liu, Susan Carpenter, Raymond R. R. Rowland, Jack C. M. Dekkers, James M. Reecy
Software Mentions: 4
Published: about 11 years ago

10.1371/journal.pone.0170293

Recent Themes in Social Networking Service Research
Cited by: 20
Author(s): John S. Liu, Mei Hsiu–Ching Ho, Louis Y. Y. Lu
Software Mentions: 4
Published: over 9 years ago

10.1016/j.csbj.2019.02.002

Herb Target Prediction Based on Representation Learning of Symptom related Heterogeneous Network
Cited by: 18
Author(s): Ning Wang, Peng Li, Xiaochen Hu, Kuo Yang, Yonghong Peng, Qiang Zhu, Runshun Zhang, Zhuye Gao, Hao Xu, Baoyan Liu, Jianxin Chen, Xuezhong Zhou
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0109870

Intraspecific Trait Variation Driven by Plasticity and Ontogeny in Hypochaeris radicata
Cited by: 41
Author(s): Rachel M. Mitchell, Jonathan D. Bakker
Software Mentions: 4
Published: almost 12 years ago

10.1186/s40104-016-0089-5

Selection signatures in Canchim beef cattle
Cited by: 23
Author(s): Ismael Urbinati, Nedenia Bonvino Stafuzza, Marcos T. Oliveira, T.C.S. Chud, R. H. Higa, Luciana Correia de Almeida Regitano, M. M. de Alencar, Marcos Eli Buzanskas, Danísio Prado Munari
Software Mentions: 4
Published: over 10 years ago

10.1371/journal.pone.0250022

Community-based conservation with formal protection provides large collateral benefits to Amazonian migratory waterbirds
Cited by: 7
Author(s): João Vitor Campos‐Silva, Carlos A. Peres, Joseph E. Hawes, Mark I. Abrahams, Paulo César Machado Andrade, L. Davenport
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pcbi.1008256

BARcode DEmixing through Non-negative Spatial Regression (BarDensr)
Cited by: 13
Author(s): Shuonan Chen, Jackson Loper, Xiaoyin Chen, Alex Vaughan, Anthony M. Zador, Liam Paninski
Software Mentions: 4
Published: over 5 years ago

10.1080/01652176.2020.1745317

Effects of hypersensitivity disorders and environmental factors on the equine intestinal microbiota
Cited by: 11
Author(s): Sarah Kaiser‐Thom, Markus Hilty, Vinzenz Gerber
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pntd.0007766

Enduring extreme climate: Effects of severe drought on Triatoma brasiliensis populations in wild and man-made habitats of the Caatinga
Cited by: 6
Author(s): Antonia C. Ribeiro, Otília Sarquis, Marli Maria Lima, Fernando Abad‐Franch
Software Mentions: 4
Published: almost 7 years ago

10.3390/e22050545

Weighted Quantile Regression Forests for Bimodal Distribution Modeling: A Loss Given Default Case
Cited by: 3
Author(s): Michał Gostkowski, Krzysztof Gajowniczek
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pgen.1009390

Zebrafish Ski7 tunes RNA levels during the oocyte-to-embryo transition
Cited by: 11
Author(s): Luis Enrique Cabrera-Quio, Alexander Schleiffer, Karl Mechtler, Andrea Pauli
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0253435

Sports practice in Japan and France: A comparative analysis
Cited by: 1
Author(s): Brice Lefèvre, Hiroatsu Nohara, O. Nier
Software Mentions: 4
Published: about 5 years ago

10.3390/ijerph16183435

A Multi-Center Competing Risks Model and Its Absolute Risk Calculation Approach
Cited by: 1
Author(s): Wang Jin-tao, Zhongshang Yuan, Yi Liu, Fuzhong Xue
Software Mentions: 4
Published: almost 7 years ago

10.1017/S0950268820002782

Chasing the ghost of infection past: identifying thresholds of change during the COVID-19 infection in Spain
Cited by: 11
Author(s): Luis Santamarı́a, Joaquín Hortal
Software Mentions: 4
Published: over 6 years ago

10.3390/nu11061390

Influence of Socio-Economic and Psychosocial Profiles on the Human Breast Milk Bacteriome of South African Women
Cited by: 14
Author(s): Anna Ojo-Okunola, Shantelle Claassen-Weitz, Kilaza Samson Mwaikono, Sugnet Gardner-Lubbe, Dan J. Stein, Heather J. Zar, Mark P. Nicol, Elloise du Toit
Software Mentions: 4
Published: about 7 years ago

10.1371/journal.pntd.0008881

Status and forecast of leprosy in the still endemic province of Formosa in northern Argentina
Cited by: 2
Author(s): María Rosa Arnaiz, Hernán A. Iuri, José I. Franco, Lucila Arzamendia, María Soledad Santini, Hugo C. Recalde
Software Mentions: 4
Published: over 5 years ago

10.1038/s41421-021-00271-4

Single-cell analysis of pancreatic ductal adenocarcinoma identifies a novel fibroblast subtype associated with poor prognosis but better immunotherapy response
Cited by: 90
Author(s): Yu Wang, Yongfeng Liang, Haiyan Xu, Xiao Zhang, Tiebo Mao, Jiujie Cui, Jiyong Yao, Yongchao Wang, Feng Jiao, Xiuying Xiao, Jiong Hu, Qing Xia, Xiaofei Zhang, Xujun Wang, Yongwei Sun, Deliang Fu, Lei Shen, Ximing Xu, Jing Xue, Liwei Wang
Software Mentions: 4
Published: about 5 years ago

10.1002/evl3.167

Ecological speciation in European whitefish is driven by a large‐gaped predator
Cited by: 13
Author(s): Gunnar Öhlund, Mats Bodin, Karin Nilsson, Sven‐Ola Öhlund, Kenyon B. Mobley, Alan G. Hudson, Mikael Peedu, Åke Brännström, Pia Bartels, Kim Præbel, Catherine L. Hein, Petter Johansson, Göran Englund
Software Mentions: 4
Published: about 6 years ago

10.3389/fninf.2019.00056

Curated Model Development Using NEUROiD: A Web-Based NEUROmotor Integration and Design Platform
Cited by: 7
Author(s): Raghu Sesha Iyengar, Madhav Vinodh Pithapuram, Amreek Singh, Madhusudan Raghavan
Software Mentions: 4
Published: about 7 years ago

10.1038/srep45840

Microbial Biogeography and Core Microbiota of the Rat Digestive Tract
Cited by: 105
Author(s): Dongyao Li, Haiqin Chen, Bingyong Mao, Qin Yang, Jianxin Zhao, Zhennan Gu, Hao Zhang, Yong Q. Chen, Wei Chen
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pone.0067720

Factors Determining Forest Diversity and Biomass on a Tropical Volcano, Mt. Rinjani, Lombok, Indonesia
Cited by: 26
Author(s): Gbadamassi G.O. Dossa, Ekananda Paudel, Junichi Fujinuma, Haiying Yu, Wanlop Chutipong, Zuoqiang Yuan, Sherryl L. Paz, Rhett D. Harrison
Software Mentions: 4
Published: about 13 years ago

10.1371/journal.pone.0217920

Overexpression of PODXL/ITGB1 and BCL7B/ITGB1 accurately predicts unfavorable prognosis compared to the TNM staging system in postoperative pancreatic cancer patients
Cited by: 14
Author(s): Keisuke Taniuchi, Mutsuo Furihata, Seiji Naganuma, Masahiko Sakaguchi, Toshiji Saibara
Software Mentions: 4
Published: about 7 years ago

10.3390/s18114029

Sensor Fusion for Recognition of Activities of Daily Living
Cited by: 51
Author(s): Jiaxuan Wu, Yunfei Feng, Peng Sun
Software Mentions: 4
Published: over 7 years ago

10.1155/2021/6656622

Profiles of Innate Immune Cell Infiltration and Related Core Genes in Psoriasis
Cited by: 11
Author(s): Xiaoting Gong, Wei Wang
Software Mentions: 4
Published: over 5 years ago

10.1523/ENEURO.0166-18.2018

Genetic Control of Myelin Plasticity after Chronic Psychosocial Stress
Cited by: 45
Author(s): Mikaela Laine, Kalevi Trontti, Zuzanna Misiewicz, Ewa Sokołowska, Natalia Kulesskaya, Aino Heikkinen, Suvi Saarnio, Ingrid Balcells, Pierre Ameslon, Dario Greco, Pirkko Mattila, Pekka Ellonen, Lars Paulín, Petri Auvinen, Eija Jokitalo, Iiris Hovatta
Software Mentions: 4
Published: about 8 years ago

10.7717/peerj.9821

Assessing the responses of <i>Sphagnum</i> micro-eukaryotes to climate changes using high throughput sequencing
Cited by: 10
Author(s): Monika Reczuga, Christophe V. W. Seppey, Matthieu Mulot, Vincent E. J. Jassey, Alexandre Buttler, Sandra Słowińska, Michael Słowiński, Enrique Lara, Mariusz Lamentowicz, Edward A. D. Mitchell
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0258207

A new phenothiazine derivate is active against Clostridioides difficile and shows low cytotoxicity
Cited by: 3
Author(s): Troels Ronco, Francisca Maria Aragao, Lasse Saaby, Jørn B. Christensen, A. Permin, Andrew R. Williams, Stig Milan Thamsborg, Rikke Heidemann Olsen
Software Mentions: 4
Published: almost 5 years ago

10.1099/mgen.0.000039

Whole-genome sequencing investigation of animal-skin-drum-associated UK anthrax cases reveals evidence of mixed populations and relatedness to a US case
Cited by: 9
Author(s): Steven T. Pullan, Talima Pearson, Jennie Latham, Joanne Mason, Barry Atkinson, Nigel Silman, Chung K. Marston, Jason W. Sahl, Dawn N. Birdsell, Alex R. Hoffmaster, Paul Keim, Richard Vipond
Software Mentions: 4
Published: almost 11 years ago

10.1126/sciadv.abe8215

Dynamics of sex chromosome evolution in a rapid radiation of cichlid fishes
Cited by: 28
Author(s): Athimed El Taher, Fabrizia Ronco, Michael Matschiner, Walter Salzburger, Astrid Böhne
Software Mentions: 4
Published: almost 5 years ago

10.18632/oncotarget.25965

Snail mediates repression of the Dlk1-Dio3 locus in lung tumor-infiltrating immune cells
Cited by: 4
Author(s): Svenja Groeneveld, Julien Faget, Nadine Zangger, Etienne Meylan
Software Mentions: 4
Published: almost 8 years ago

10.1186/1475-2859-6-29

Thioredoxin reductase is a key factor in the oxidative stress response of Lactobacillus plantarum WCFS1
Cited by: 107
Author(s): L.M. Serrano, Douwe Molenaar, Michiel Wels, Bas Teusink, Peter A. Bron, Willem M. de Vos, Eddy J. Smid
Software Mentions: 4
Published: almost 19 years ago

10.1371/journal.pone.0169172

Associations of Radiomic Data Extracted from Static and Respiratory-Gated CT Scans with Disease Recurrence in Lung Cancer Patients Treated with SBRT
Cited by: 82
Author(s): Elizabeth Huynh, Thibaud Coroller, Vivek Narayan, Vishesh Agrawal, John Romano, Idalid Franco, Chintan Parmar, Ying Hou, Raymond H. Mak, Hugo J.W.L. Aerts
Software Mentions: 4
Published: over 9 years ago

10.2196/27214

Google Trends for Pain Search Terms in the World’s Most Populated Regions Before and After the First Recorded COVID-19 Case: Infodemiological Study
Cited by: 13
Author(s): Istvan S. Szilagyi, Torsten Ullrich, Kordula Lang-Illievich, Christoph Klivinyi, Gregor Alexander Schittek, Holger Simonis, Helmar Bornemann‐Cimenti
Software Mentions: 4
Published: over 5 years ago

10.1038/s41421-018-0027-0

Gas41 links histone acetylation to H2A.Z deposition and maintenance of embryonic stem cell identity
Cited by: 38
Author(s): Chih Chao Hsu, Dan Zhao, Jiejun Shi, Danni Peng, Haipeng Guan, Yuanyuan Li, Yaling Huang, Hong Wen, Wei Li, Haitao Li, Xiaobing Shi
Software Mentions: 4
Published: about 8 years ago

10.3389/fmicb.2021.689674

Adaptation of Soil Fungal Community Structure and Assembly to Long- Versus Short-Term Nitrogen Addition in a Tropical Forest
Cited by: 15
Author(s): Jinhong He, Shuo Jiao, Xiangping Tan, Hui Wei, Xiaomin Ma, Yonggang Nie, Juxiu Liu, Xiankai Lu, Jiangming Mo, Weijun Shen
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12906-017-1647-x

Acupuncture and moxibustion for chronic fatigue syndrome in traditional Chinese medicine: a systematic review and meta-analysis
Cited by: 47
Author(s): Taiwu Wang, Cong Xu, Keli Pan, Hongyan Xiong
Software Mentions: 4
Published: over 9 years ago

10.1101/mcs.a002444

Resistance-promoting effects of ependymoma treatment revealed through genomic analysis of multiple recurrences in a single patient
Cited by: 15
Author(s): Christopher A. Miller, Sonika Dahiya, Tiandao Li, Robert S. Fulton, Matthew D. Smyth, Gavin P. Dunn, Joshua B. Rubin, Elaine R. Mardis
Software Mentions: 4
Published: over 8 years ago

10.1002/2211-5463.12700

C7orf59/LAMTOR4 phosphorylation and structural flexibility modulate Ragulator assembly
Cited by: 5
Author(s): Nadia Rasheed, Tatiani B. Lima, Gustavo Fernando Mercaldi, Andrey Fabricio Ziem Nascimento, Ana L S Silva, Germanna Lima Righetto, Liron Bar-Peled, Kuang Shen, David M. Sabatini, Fábio C. Gozzo, Ricardo Aparício, Juliana Helena Costa Smetana
Software Mentions: 4
Published: about 7 years ago

10.1371/journal.pone.0209524

Italian norms and naming latencies for 357 high quality color images
Cited by: 10
Author(s): Eduardo Navarrete, Giorgio Arcara, Sara Mondini, Barbara Penolazzi
Software Mentions: 4
Published: over 7 years ago

10.1002/lno.11361

The global <i>Microcystis</i> interactome
Cited by: 51
Author(s): Katherine V. Cook, Chuang Li, Haiyuan Cai, Lee R. Krumholz, K. David Hambright, Hans W. Paerl, Morgan M. Steffen, Alan E. Wilson, Michele A. Burford, Hans‐Peter Grossart, David P. Hamilton, Helong Jiang, Assaf Sukenik, Delphine Latour, Elisabeth I. Meyer, Judit Padisák, Boqiang Qin, Richard M. Zamor, Guangwei Zhu
Software Mentions: 4
Published: over 6 years ago

10.1038/srep46553

Genome sequence of Plasmopara viticola and insight into the pathogenic mechanism
Cited by: 60
Author(s): Ling Yin, Yunhe An, Junjie Qu, Xinlong Li, Yali Zhang, Ian B. Dry, Huijuan Wu, Jiang Lu
Software Mentions: 4
Published: over 9 years ago

10.1155/2015/573165

Automated Classification of Circulating Tumor Cells and the Impact of Interobsever Variability on Classifier Training and Performance
Cited by: 32
Author(s): Carl-Magnus Svensson, Ron Hübler, Marc Thilo Figge
Software Mentions: 4
Published: over 11 years ago

10.1007/s10433-020-00581-8

Perceived personal deadlines for late-life preparation across adulthood
Cited by: 1
Author(s): Frieder R. Lang, Fiona S. Rupprecht
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-021-85255-w

Leveraging graph-based hierarchical medical entity embedding for healthcare applications
Cited by: 7
Author(s): Tong Wu, Yunlong Wang, Yue Wang, Emily Zhao, Yilian Yuan
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0022022

Origin and Evolution of TRIM Proteins: New Insights from the Complete TRIM Repertoire of Zebrafish and Pufferfish
Cited by: 94
Author(s): Pierre Boudinot, Lieke M. van der Aa, Luc Jouneau, Louis Du Pasquier, Pierre Pontarotti, Valérie Briolat, Abdenour Benmansour, Jean‐Pierre Levraud
Software Mentions: 4
Published: about 15 years ago

10.1371/journal.pcbi.1007453

TAPES: A tool for assessment and prioritisation in exome studies
Cited by: 15
Author(s): Alexandre Xavier, Rodney J. Scott, Bente A. Talseth‐Palmer
Software Mentions: 4
Published: almost 7 years ago

10.1093/gigascience/giaa142

A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals
Cited by: 29
Author(s): Jing Li, Jilin Zhang, Jing Liu, Yang Zhou, Changqing Cai, Luohao Xu, Xuelei Dai, Shaohong Feng, Chunxue Guo, Jiahui Rao, Kai Wei, Erich D. Jarvis, Yu Jiang, Zhengkui Zhou, Guojie Zhang, Qi Zhou
Software Mentions: 4
Published: over 5 years ago

10.1155/2018/3028290

Stress-Adaptive Responses Associated with High-Level Carbapenem Resistance in KPC-ProducingKlebsiella pneumoniae
Cited by: 4
Author(s): Sheila Adams‐Sapper, Adam Gayoso, Lee W. Riley
Software Mentions: 4
Published: over 8 years ago

10.1155/2020/7594098

Development and Validation of an Immune-Related Prognostic Signature for Ovarian Cancer Based on Weighted Gene Coexpression Network Analysis
Cited by: 6
Author(s): Yuanyuan An, Qing Yang
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2019.03111

Characterization of Ebinur Lake Virus and Its Human Seroprevalence at the China–Kazakhstan Border
Cited by: 11
Author(s): Han Xia, Ran Liu, Lu Zhao, Xiang Dong Sun, Zhong Zheng, Evans Atoni, Xiaomin Hu, Bo Zhang, Guilin Zhang, Zhiming Yuan
Software Mentions: 4
Published: over 6 years ago

10.1093/biostatistics/kxy084

MACPET: model-based analysis for ChIA-PET
Cited by: 0
Author(s): Ioannis Vardaxis, Finn Drabløs, Morten Rye, Bo Henry Lindqvist
Software Mentions: 4
Published: over 7 years ago

10.1093/bioinformatics/btw390

CellProfiler Analyst: interactive data exploration, analysis and classification of large biological image sets
Cited by: 106
Author(s): David Dao, Adam Fraser, Jia‐Jang Hung, Vebjorn Ljosa, Shantanu Singh, Anne E. Carpenter
Software Mentions: 4
Published: about 10 years ago

10.3389/fpsyg.2021.684639

The Influence of Focus Marking on Pronoun Resolution in Dialogue Context
Cited by: 3
Author(s): Liam Blything, Juhani Järvikivi, Abigail Toth, Anja Arnhold
Software Mentions: 4
Published: about 5 years ago

10.1037/xlm0000532

Listeners and readers generalize their experience with word meanings across modalities.
Cited by: 16
Author(s): Rebecca A. Gilbert, Matthew H. Davis, M. Gareth Gaskell, Jennifer M. Rodd
Software Mentions: 4
Published: almost 8 years ago

10.7554/eLife.35551

Ssd1 and Gcn2 suppress global translation efficiency in replicatively aged yeast while their activation extends lifespan
Cited by: 54
Author(s): Zheng Hu, Bo Xia, Spike D. L. Postnikoff, Zih Jie Shen, Alin Tomoiaga, Troy A. A. Harkness, Ja Hwan Seol, Wei Li, Kaifu Chen, Jessica K. Tyler
Software Mentions: 4
Published: almost 8 years ago

10.2196/12231

Designing a Chatbot for a Brief Motivational Interview on Stress Management: Qualitative Case Study
Cited by: 70
Author(s): SoHyun Park, Jeewon Choi, Sung‐Woo Lee, Changhoon Oh, Changdai Kim, Soohyun La, Joonhwan Lee, Bongwon Suh
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0100018

Transcriptome Profiling Reveals Higher Vertebrate Orthologous of Intra-Cytoplasmic Pattern Recognition Receptors in Grey Bamboo Shark
Cited by: 18
Author(s): Tirumurugaan Krishnaswamy Gopalan, Pradheepa Gururaj, Ravi P. Gupta, Gopal Dhinakar Raj, Preeti Rajesh, Balachandran Chidambaram, Aravindan Kalyanasundaram, R. Amri
Software Mentions: 4
Published: about 12 years ago

10.1186/s12870-017-1062-y

Relationships between drought, heat and air humidity responses revealed by transcriptome-metabolome co-analysis
Cited by: 46
Author(s): Elisabeth Georgii, Ming Jin, Jin Zhao, Basem Kanawati, Philippe Schmitt‐Kopplin, Andreas Albert, Jana Barbro Winkler, Anton R. Schäffner
Software Mentions: 4
Published: about 9 years ago

10.3389/fimmu.2020.594136

Efferocytic Defects in Early Atherosclerosis Are Driven by GATA2 Overexpression in Macrophages
Cited by: 22
Author(s): Charles Yin, Angela M. Vrieze, Mara Rosoga, James Akingbasote, Emily N. Pawlak, Rajesh Jacob, Jonathan Hu, Neha Sharma, Jimmy D. Dikeakos, Lillian Barra, A. Dave Nagpal, Bryan Heit
Software Mentions: 4
Published: almost 6 years ago

10.3390/ijms22189983

Comprehensive Survey of Recent Drug Discovery Using Deep Learning
Cited by: 43
Author(s): Kim Jintae, Sera Park, Dongbo Min, Wankyu Kim
Software Mentions: 4
Published: almost 5 years ago

10.1186/1471-2105-11-465

Parallel multiplicity and error discovery rate (EDR) in microarray experiments
Cited by: 4
Author(s): Wayne Xu, Clay J. Carter
Software Mentions: 4
Published: almost 16 years ago

10.3390/mi8080233

Operation of a MOEMS Deformable Mirror in Cryo: Challenges and Results
Cited by: 5
Author(s): Frédéric Zamkotsian, Patrick Lanzoni, Rudy Barette, Michael A. Helmbrecht, Franck Marchis, Alex Teichman
Software Mentions: 4
Published: about 9 years ago

10.1111/acel.13293

Novel DNA methylation marker discovery by assumption‐free genome‐wide association analysis of cognitive function in twins
Cited by: 4
Author(s): Afsaneh Mohammadnejad, Mette Soerensen, Jan Baumbach, Jonas Mengel‐From, Weilong Li, Jesper Lund, Shuxia Li, Lene Christiansen, Kaare Christensen, Jacob Hjelmborg, Qihua Tan
Software Mentions: 4
Published: over 5 years ago

10.3390/e22020153

Selection Consistency of Lasso-Based Procedures for Misspecified High-Dimensional Binary Model and Random Regressors
Cited by: 2
Author(s): Mariusz Kubkowski, Jan Mielniczuk
Software Mentions: 4
Published: over 6 years ago

10.1002/eap.2089

Local‐ and landscape‐scale variables shape insect diversity in an urban biodiversity hot spot
Cited by: 36
Author(s): Benjamin J. Adams, Enjie Li, Christine A. Bahlai, Emily K. Meineke, Terrence P. McGlynn, Brian V. Brown
Software Mentions: 4
Published: over 6 years ago

10.1186/s12916-019-1340-7

Performance of the Framingham risk models and pooled cohort equations for predicting 10-year risk of cardiovascular disease: a systematic review and meta-analysis
Cited by: 113
Author(s): Johanna A A Damen, Romin Pajouheshnia, Pauline Heus, Karel G.M. Moons, Johannes B. Reitsma, R. J. P. M. Scholten, Lotty Hooft, Thomas P A Debray
Software Mentions: 4
Published: about 7 years ago

10.15252/msb.20177656

Toward an integrated map of genetic interactions in cancer cells
Cited by: 65
Author(s): Benedikt Rauscher, Florian Heigwer, Luisa Henkel, Thomas Hielscher, Oksana Voloshanenko, Michael Boutros
Software Mentions: 4
Published: over 8 years ago

10.3390/biom10060850

Can We Assume the Gene Expression Profile as a Proxy for Signaling Network Activity?
Cited by: 8
Author(s): Mehran Piran, Reza Karbalaei, Mehrdad Piran, Jehad Aldahdooh, Mehdi Mirzaie, Naser Ansari-Pour, Jing Tang, Mohieddin Jafari
Software Mentions: 4
Published: about 6 years ago

10.12688/f1000research.11146.2

De novo whole-genome assembly of a wild type yeast isolate using nanopore sequencing
Cited by: 5
Author(s): Michael Liem, Hans J. Jansen, Ron P. Dirks, Christiaan V. Henkel, G. Paul H. van Heusden, Richard J.L.F. Lemmers, Trifa Omer, Shuai Shao, Peter J. Punt, Herman P. Spaink
Software Mentions: 4
Published: about 8 years ago

10.1002/evl3.176

Rapid local adaptation linked with phenotypic plasticity
Cited by: 13
Author(s): Syuan‐Jyun Sun, Andrew M. Catherall, Sónia Pascoal, Benjamin J. M. Jarrett, Sara Miller, Michael J. Sheehan, Rebecca M. Kilner
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0144782

SVM2Motif—Reconstructing Overlapping DNA Sequence Motifs by Mimicking an SVM Predictor
Cited by: 6
Author(s): Marina M.-C. Vidovic, Nico Görnitz, Klaus Robert Müller, Gunnar Rätsch, Marius Kloft
Software Mentions: 4
Published: over 10 years ago

10.1186/s13059-020-02029-9

Gapless assembly of maize chromosomes using long-read technologies
Cited by: 87
Author(s): Jianing Liu, Arun S. Seetharam, Kapeel Chougule, Shujun Ou, Kyle W. Swentowsky, Jonathan I. Gent, Víctor Llaca, Margaret R. Woodhouse, Nancy Manchanda, Gernot G. Presting, David Kudrna, Magdy S. Alabady, Candice N. Hirsch, Kevin Fengler, Doreen Ware, Todd P. Michael, Matthew B. Hufford, R. Kelly Dawe
Software Mentions: 4
Published: about 6 years ago

10.1186/s12884-020-03150-0

Spiral artery blood flow during pregnancy: a systematic review and meta-analysis
Cited by: 6
Author(s): V. Schiffer, Laura Evers, Sander de Haas, Chahinda Ghossein‐Doha, Salwan Al‐Nasiry, Marc E. A. Spaanderman
Software Mentions: 4
Published: over 5 years ago

10.1534/g3.119.400617

Population Selection and Sequencing of<i>Caenorhabditis elegans</i>Wild Isolates Identifies a Region on Chromosome III Affecting Starvation Resistance
Cited by: 21
Author(s): Amy K. Webster, Anthony Hung, Brad T. Moore, Ryan Guzman, James M. Jordan, Rebecca E. W. Kaplan, Jonathan D. Hibshman, Robyn E. Tanny, Daniel E. Cook, Erik C. Andersen, L. Ryan Baugh
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12888-018-1769-9

Prevalence of acute stress disorder among road traffic accident survivors: a meta-analysis
Cited by: 42
Author(s): Wenjie Dai, Aizhong Liu, Atipatsa Chiwanda Kaminga, Jing Deng, Zhi-Wei Lai, Jianzhou Yang, Shi Wu Wen
Software Mentions: 4
Published: about 8 years ago

10.1371/journal.pone.0249839

A targeted e-learning approach for keeping universities open during the COVID-19 pandemic while reducing student physical interactions
Cited by: 19
Author(s): Sing Chen Yeo, Clin K Y Lai, Jacinda Tan, Joshua J. Gooley
Software Mentions: 4
Published: over 5 years ago

10.1186/s12862-016-0607-2

Thermal plasticity in farmed, wild and hybrid Atlantic salmon during early development: has domestication caused divergence in low temperature tolerance?
Cited by: 16
Author(s): Monica Favnebøe Solberg, Lise Dyrhovden, Ivar Helge Matre, Kevin A. Glover
Software Mentions: 4
Published: over 10 years ago

10.3389/fmicb.2021.688754

High Potential for Secondary Metabolite Production of Paracoccus marcusii CP157, Isolated From the Crustacean Cancer pagurus
Cited by: 7
Author(s): Janina Leinberger, Jonas Holste, Boyke Bunk, Heike M. Freese, Cathrin Spröer, Leon Dlugosch, Anna-Carlotta Kück, Stefan Schulz, Thorsten Brinkhoff
Software Mentions: 4
Published: about 5 years ago

10.3390/s21186020

Biometric Identification Based on Eye Movement Dynamic Features
Cited by: 3
Author(s): Katarzyna Harężlak, Michal Blasiak, Paweł Kasprowski
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12943-017-0719-3

Circular RNA_LARP4 inhibits cell proliferation and invasion of gastric cancer by sponging miR-424-5p and regulating LATS1 expression
Cited by: 416
Author(s): Jing Zhang, Hui Liu, Lidan Hou, Ge Wang, Rui Zhang, Yanxia Huang, Xiaoyu Chen, Jingde Zhu
Software Mentions: 4
Published: almost 9 years ago

10.1186/1471-2164-12-S3-S9

UASIS: Universal Automatic SNP Identification System
Cited by: 5
Author(s): Danny Chiang Choon Poo, Shaojiang Cai, James T. L. Mah
Software Mentions: 4
Published: over 15 years ago

10.1016/j.csbj.2020.09.033

Deep metabolome: Applications of deep learning in metabolomics
Cited by: 76
Author(s): Yotsawat Pomyen, Kwanjeera Wanichthanarak, Patcha Poungsombat, Johannes F. Fahrmann, Dmitry Grapov, Sakda Khoomrung
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0224197

A new resolution function to evaluate tree shape statistics
Cited by: 7
Author(s): Maryam Hayati, Bita Shadgar, Leonid Chindelevitch
Software Mentions: 4
Published: over 6 years ago

10.1186/s13015-016-0069-5

Bitpacking techniques for indexing genomes: I. Hash tables
Cited by: 2
Author(s): Thomas D. Wu
Software Mentions: 4
Published: over 10 years ago

10.1186/1755-8794-6-S3-S1

A categorical network approach for discovering differentially expressed regulations in cancer
Cited by: 2
Author(s): Nikolay Balov
Software Mentions: 4
Published: over 13 years ago

10.1371/journal.pone.0218230

Atoh8 acts as a regulator of chondrocyte proliferation and differentiation in endochondral bones
Cited by: 10
Author(s): Nadine Schroeder, Manuela Wuelling, Daniel Hoffmann, Beate Brand‐Saberi, Andrea Vortkamp
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12859-017-2000-6

A comparison of genotyping-by-sequencing analysis methods on low-coverage crop datasets shows advantages of a new workflow, GB-eaSy
Cited by: 53
Author(s): Daniel P. Wickland, Gopal Battu, Karen A. Hudson, Brian W. Diers, Matthew E. Hudson
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-018-26423-3

Probiotic supplementation and associated infant gut microbiome and health: a cautionary retrospective clinical comparison
Cited by: 68
Author(s): Candice Quin, Mehrbod Estaki, Deanna M. Vollman, Jacqueline A. Barnett, S K Gill
Software Mentions: 4
Published: about 8 years ago

10.1186/s12859-018-2430-9

A comparative study of survival models for breast cancer prognostication revisited: the benefits of multi-gene models
Cited by: 5
Author(s): Michal R. Grzadkowski, Dorota H. Sendorek, Christine P’ng, Vincent Huang, Paul C. Boutros
Software Mentions: 4
Published: almost 8 years ago

10.1186/1471-2105-13-176

The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding
Cited by: 9
Author(s): Karl Kornacker, Morten Rye, Tony Håndstad, Finn Drabløs
Software Mentions: 4
Published: about 14 years ago

10.1186/s12874-019-0769-x

Ranking hospital performance based on individual indicators: can we increase reliability by creating composite indicators?
Cited by: 14
Author(s): Peter C. Austin, Iris Ceyisakar, Ewout W. Steyerberg, Hester F. Lingsma, Perla J Marang-van de Mheen
Software Mentions: 4
Published: about 7 years ago

10.1186/s13062-019-0243-z

Identification of city specific important bacterial signature for the MetaSUB CAMDA challenge microbiome data
Cited by: 21
Author(s): Alejandro R. Walker, Susmita Datta
Software Mentions: 4
Published: about 7 years ago

10.1186/s12866-021-02306-y

Spatio-temporal dynamics of bacterial communities in the shoreline of Laurentian great Lake Erie and Lake St. Clair’s large freshwater ecosystems
Cited by: 2
Author(s): Abdolrazagh Hashemi Shahraki, Subba Rao Chaganti, Daniel D. Heath
Software Mentions: 4
Published: almost 5 years ago

10.1002/ece3.5019

Area and distance from mainland affect in different ways richness and phylogenetic diversity of snakes in Atlantic Forest coastal islands
Cited by: 10
Author(s): José Thales da Motta Portillo, Lilian Sayuri Ouchi-Melo, Lucas Batista Crivellari, Thiago Alves Lopes de Oliveira, Ricardo J. Sawaya, Leonardo da Silva Duarte
Software Mentions: 4
Published: over 7 years ago

10.1186/1471-2105-15-44

The HTS barcode checkerpipeline, a tool for automated detection of illegally traded species from high-throughput sequencing data
Cited by: 19
Author(s): Youri Lammers, Tamara Peelen, Rutger A. Vos, Barbara Gravendeel
Software Mentions: 4
Published: over 12 years ago

10.1111/joa.12994

Fabella prevalence rate increases over 150 years, and rates of other sesamoid bones remain constant: a systematic review
Cited by: 25
Author(s): Michael A. Berthaume, Erica Di Federico, Anthony M.J. Bull
Software Mentions: 4
Published: over 7 years ago

10.1186/s13054-017-1729-7

Protein S100 as outcome predictor after out-of-hospital cardiac arrest and targeted temperature management at 33 °C and 36 °C
Cited by: 61
Author(s): Pascal Stammet, Josef Dankiewicz, Niklas Nielsen, François Faÿs, Olivier Collignon, Christian Hassager, Michael Wanscher, Johan Undén, Jørn Wetterslev, Tommaso Pellis, Anders Åneman, Jan Hovdenes, Matt P. Wise, Georges Gilson, David Erlinge, Janneke Horn, Tobias Cronberg, Michael Kuiper, Jesper Kjærgaard, Yvan Gasche, Yvan Devaux, Hans Friberg
Software Mentions: 4
Published: about 9 years ago

10.1186/s12859-015-0857-9

Methods for the integration of multi-omics data: mathematical aspects
Cited by: 272
Author(s): Matteo Bersanelli, Ettore Mosca, Daniel Remondini, Enrico Giampieri, Claudia Sala, Gastone Castellani, Luciano Milanesi
Software Mentions: 4
Published: over 10 years ago

10.1155/2021/9967954

Construction and Validation of a Macrophage-Associated Risk Model for Predicting the Prognosis of Osteosarcoma
Cited by: 5
Author(s): Kang-Wen Xiao, Zhibo Liu, Zhao-Yi Zeng, F. Yan, Lingfei Xiao, Jiali Li, Lin Cai
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2021.610823

The Structure of Rhizosphere Fungal Communities of Wild and Domesticated Rice: Changes in Diversity and Co-occurrence Patterns
Cited by: 23
Author(s): Jingjing Chang, Yu Sun, Lei Tian, Ji Li, Shasha Luo, Fahad Nasir, Eiko E. Kuramae, Chunjie Tian
Software Mentions: 4
Published: over 5 years ago