Papers: 10.3390/ijms21010185

https://doi.org/10.3390/ijms21010185

Integration of ATAC-Seq and RNA-Seq Identifies Key Genes in Light-Induced Primordia Formation of Sparassis latifolia

Cited by: 17
Author(s): Chi Yang, Lu Ma, Dan Xiao, Ying Zhenghe, Xiaoling Jiang, Yongwen Lin
Published: almost 7 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
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cran: STAR
Spike Train Analysis with R
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pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
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pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
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