10.7554/eLife.63930
An in vitro stem cell model of human epiblast and yolk sac interactionCited by: 16
Author(s): Kirsty Mackinlay, Bailey A. T. Weatherbee, Viviane Souza Rosa, Charlotte E. Handford, George R. Hudson, Tim Coorens, Lygia V. Pereira, Sam Behjati, Ludovic Vallier, Marta Shahbazi, Magdalena Zernicka‐Goetz
Software Mentions: 5
Published: almost 5 years ago
10.1186/s40168-020-00966-y
Dicer-like proteins influence Arabidopsis root microbiota independent of RNA-directed DNA methylationCited by: 10
Author(s): Rajesh Kaushal, Peng Li, Sunil Kumar Singh, Mengrui Zhang, Xinlian Zhang, Juan Ignacio Vílchez, Zhen Wang, Danxia He, Yu Ye, Suhui Lv, Zhongtian Xu, Rafael J. L. Morcillo, Wei Wang, Wei-Chang Huang, Paul W. Paré, Chun‐Peng Song, Jian‐Kang Zhu, Renyi Liu, Wenxuan Zhong, Ping Ma, Huiming Zhang
Software Mentions: 5
Published: over 5 years ago
10.1155/2020/7929132
Identification of a Seven-lncRNA Immune Risk Signature and Construction of a Predictive Nomogram for Lung AdenocarcinomaCited by: 36
Author(s): Donghui Jin, Yuxuan Song, Yuan Chen, Peng Zhang
Software Mentions: 5
Published: about 6 years ago
10.7554/eLife.49577
The Mars1 kinase confers photoprotection through signaling in the chloroplast unfolded protein responseCited by: 40
Author(s): Karina Perlaza, Hannah Toutkoushian, Morgane Boone, Mable Lam, Masakazu Iwai, Martin C. Jonikas, Peter Walter, Silvia Ramundo
Software Mentions: 5
Published: almost 7 years ago
10.1007/s00787-017-1060-5
Mental disorders and the risk for the subsequent first suicide attempt: results of a community study on adolescents and young adultsCited by: 33
Author(s): Marcel Miché, Patrizia D. Hofer, Catharina Voß, Andrea Meyer, Andrew T. Gloster, Katja Beesdo‐Baum, Roselind Lieb
Software Mentions: 5
Published: almost 9 years ago
10.1155/2021/5564040
Identification and Validation of a Prognostic Model Based on Three Autophagy-Related Genes in Hepatocellular CarcinomaCited by: 3
Author(s): Fanbo Qin, Junyong Zhang, Jianping Gong, Wenfeng Zhang
Software Mentions: 5
Published: over 5 years ago
10.3389/fonc.2020.01088
MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer PatientsCited by: 8
Author(s): Yujie Liang, Chenyu Guan, Kan Li, Guanghui Zheng, Tao Wang, Sien Zhang, Guiqing Liao
Software Mentions: 5
Published: almost 6 years ago
10.3389/fnins.2021.620899
Integrated miRNA-Seq and mRNA-Seq Study to Identify miRNAs Associated With Alzheimer’s Disease Using Post-mortem Brain Tissue SamplesCited by: 21
Author(s): Qingqin Li, Diana Cai
Software Mentions: 5
Published: over 5 years ago
10.1186/s13075-015-0682-6
Autoantigen microarrays reveal autoantibodies associated with proliferative nephritis and active disease in pediatric systemic lupus erythematosusCited by: 42
Author(s): D. James Haddon, Vivian K. Diep, J. M. Price, Cindy Limb, Paul J. Utz, Imelda Balboni
Software Mentions: 5
Published: about 11 years ago
10.3389/fgene.2019.00931
Novel Model for Comprehensive Assessment of Robust Prognostic Gene Signature in Ovarian Cancer Across Different Independent DatasetsCited by: 2
Author(s): Zhitong Bing, Yu Yao, Jie Xiong, Jinhui Tian, Xiangqian Guo, Xiuxia Li, Jingyun Zhang, Xiue Shi, Yanying Zhang, Kehu Yang
Software Mentions: 5
Published: almost 7 years ago
10.3390/nu8100660
Effect of Bifidobacterium breve on the Intestinal Microbiota of Coeliac Children on a Gluten Free Diet: A Pilot StudyCited by: 92
Author(s): Andrea Quagliariello, Irene Aloisio, Nicole Bozzi Cionci, Donata Luiselli, Giuseppe D’Auria, Llúcia Martínez-Priego, David Pérez-Villarroya, Tomaž Langerholc, Maša Primec, Dušanka Mičetić-Turk, Diana Di Gioia
Software Mentions: 5
Published: over 9 years ago
10.1038/srep40803
Dynamics of Bemisia tabaci biotypes and insecticide resistance in Fujian province in China during 2005–2014Cited by: 43
Author(s): Feng-Luan Yao, Yu Zheng, Xiaoyan Huang, Xue-Ling Ding, Jiuran Zhao, Nicolas Desneux, Yumei He, Qiyong Weng
Software Mentions: 5
Published: over 9 years ago
10.1186/s12920-021-00905-2
Bioinformatic analysis reveals an exosomal miRNA-mRNA network in colorectal cancerCited by: 17
Author(s): Jun Ma, Peilong Wang, Lei Huang, Jianxia Qiao, Jianhong Li
Software Mentions: 5
Published: over 5 years ago
10.1186/s13072-017-0137-1
Dosage compensation and sex-specific epigenetic landscape of the X chromosome in the pea aphidCited by: 32
Author(s): Gautier Richard, Fabrice Legeai, Nathalie Prunier-Leterme, Anthony Bretaudeau, Denis Tagu, Julie Jaquiéry, Gaël Le Trionnaire
Software Mentions: 5
Published: about 9 years ago
10.7150/jca.35785
A novel and validated nomogram to predict overall survival for gastric neuroendocrine neoplasmsCited by: 27
Author(s): Sheng Zhang, Yi Xin Tong, Xin Hua Zhang, Yu Jie Zhang, Xiangjie Xu, Ai Tang Xiao, Teng Fei Chao, Jian Ping Gong
Software Mentions: 5
Published: over 7 years ago
10.1186/cc13824
Prediction of mortality in adult patients with severe acute lung failure receiving veno-venous extracorporeal membrane oxygenation: a prospective observational studyCited by: 108
Author(s): Tone Bull Enger, Alois Philipp, Vibeke Videm, Matthias Lubnow, Alexander Wahba, Marcus Fischer, Çhristof Schmid, Thomas Bein, Thomas Müller
Software Mentions: 5
Published: over 12 years ago
10.1038/s41598-020-71309-y
Effects of environmental factors on microbiota of fruits and soil of Coffea arabica in BrazilCited by: 25
Author(s): Tomás Gomes Reis Veloso, Marliane de Cássia Soares da Silva, Wilton Soares Cardoso, Rogério Carvalho Guarçoni, Maria Catarina Megumi Kasuya, Lucas Louzada Pereira
Software Mentions: 5
Published: almost 6 years ago
10.1371/journal.pone.0235117
Using structured pathology data to predict hospital-wide mortality at admissionCited by: 6
Author(s): Mieke Deschepper, Willem Waegeman, Dirk Vogelaers, Kristof Eeckloo
Software Mentions: 5
Published: about 6 years ago
10.1111/1751-7915.13313
Long-term investigation of microbial community composition and transcription patterns in a biogas plant undergoing ammonia crisisCited by: 16
Author(s): Martin Fischer, Simon Güllert, Sarah Refai, Sven Künzel, Uwe Deppenmeier, Wolfgang R. Streit, Ruth A. Schmitz
Software Mentions: 5
Published: over 7 years ago
10.18632/aging.202282
A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profilingCited by: 11
Author(s): Xiaoyu Guo, Guanhua Zhang, Zhenning Wang, Hao Duan, Tian Xie, Lingming Liang, Rui Cui, Hongrong Hu, Yi Wu, Jiajun Dong, Zhenqiang He, Yonggao Mou
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.ppat.1008869
Macrophage maturation from blood monocytes is altered in people with HIV, and is linked to serum lipid profiles and activation indices: A model for studying atherogenic mechanismsCited by: 16
Author(s): Emily Bowman, Cheryl M. Cameron, Brian Richardson, Milind V. Kulkarni, Janelle Gabriel, Morgan J. Cichon, Ken M. Riedl, Yousef Mustafa, Michael Cartwright, Brandon Snyder, Subha V. Raman, David A. Zidar, Susan L. Koletar, Martin P. Playford, Nehal N. Mehta, Scott F. Sieg, Michael L. Freeman, Michael M. Lederman, Mark J. Cameron, Nicholas T. Funderburg
Software Mentions: 5
Published: almost 6 years ago
10.1371/journal.pone.0223404
Technology opportunity discovery by structuring user needs based on natural language processing and machine learningCited by: 14
Author(s): Taeyeoun Roh, Yujin Jeong, Hye-Jin Jang, Byungun Yoon
Software Mentions: 5
Published: over 6 years ago
10.1038/s41598-018-33718-y
A Genome-wide View of Transcriptome Dynamics During Early Spike Development in Bread WheatCited by: 40
Author(s): Yongpeng Li, Xing Fu, Meicheng Zhao, Wei Zhang, Bo Li, Diaoguo An, Junming Li, Aimin Zhang, Renyi Liu, Xigang Liu
Software Mentions: 5
Published: almost 8 years ago
10.1001/jamanetworkopen.2018.5845
Association Between Early Intravenous Fluids Provided by Paramedics and Subsequent In-Hospital Mortality Among Patients With SepsisCited by: 18
Author(s): Daniel Lane, Hannah Wunsch, Refik Saskin, Sheldon Cheskes, Steve Lin, Laurie J. Morrison, Damon C. Scales
Software Mentions: 5
Published: over 7 years ago
10.3389/fmicb.2018.01909
Intensified Pulse Rotations Buildup Pea Rhizosphere Pathogens in Cereal and Pulse Based Cropping SystemsCited by: 25
Author(s): Yining Niu, Luke D. Bainard, William E. May, Zakir Hossain, Chantal Hamel, Yantai Gan
Software Mentions: 5
Published: almost 8 years ago
10.1016/j.stem.2015.04.004
Combined Single-Cell Functional and Gene Expression Analysis Resolves Heterogeneity within Stem Cell PopulationsCited by: 369
Author(s): Nicola K. Wilson, David G. Kent, Florian Buettner, Mona Shehata, Iain C. Macaulay, Fernando J. Calero-Nieto, Manuel Sánchez Castillo, Caroline A. Oedekoven, Evangelia Diamanti, Reiner Schulte, Chris P. Ponting, Thierry Voet, Carlos Caldas, John Stingl, Anthony Green, Fabian J. Theis, Berthold Göttgens
Software Mentions: 5
Published: about 11 years ago
10.1371/journal.pbio.3000434
GPCRs show widespread differential mRNA expression and frequent mutation and copy number variation in solid tumorsCited by: 55
Author(s): Krishna Sriram, Kevin Moyung, Ross Corriden, Hannah Carter, Paul A. Insel
Software Mentions: 5
Published: over 6 years ago
10.1186/s13072-020-00359-3
UTX/KDM6A suppresses AP-1 and a gliogenesis program during neural differentiation of human pluripotent stem cellsCited by: 5
Author(s): Beisi Xu, Brett B. Mulvey, Muneeb Salie, Xiaoyang Yang, Yurika Matsui, Anjana Nityanandam, Yiping Fan, Jamy C. Peng
Software Mentions: 5
Published: almost 6 years ago
10.1111/jcmm.16469
m6A regulator‐mediated RNA methylation modification patterns are involved in immune microenvironment regulation of periodontitisCited by: 57
Author(s): Xiaoqi Zhang, Shizhen Zhang, Xinyu Yan, Yue Shan, Ling Lü, Jing Zhou, Qianyun Kuang, Minqi Li, Hu Long, Wenli Lai
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.pcbi.1008976
MetaGSCA: A tool for meta-analysis of gene set differential coexpressionCited by: 2
Author(s): Yan Guo, Hui Yu, Haocan Song, Jia-Peng He, Olufunmilola Oyebamiji, Huining Kang, Jie Ping, Scott A. Ness, Yu Shyr, Fei Ye
Software Mentions: 5
Published: about 5 years ago
10.1016/j.heliyon.2020.e04354
The coverage of environmental issues in FM radios in Nepal: the current status and challengesCited by: 1
Author(s): Prakash Kumar Paudel, Rabin Bastola, Pashe Tamang Lopchan
Software Mentions: 5
Published: about 6 years ago
10.1186/s13059-015-0863-2
IL-4 orchestrates STAT6-mediated DNA demethylation leading to dendritic cell differentiationCited by: 89
Author(s): Roser Vento‐Tormo, Carlos Company, Javier Rodríguez-Ubreva, Lorenzo de la Rica, José Urquiza, Biola M. Javierre, Radhakrishnan Sabarinathan, Ana Luque, Manel Esteller, Josep M. Aran, Damiana Álvarez-Errico, Esteban Ballestar
Software Mentions: 5
Published: over 10 years ago
10.1371/journal.pone.0171689
Transcriptomic meta-analysis reveals up-regulation of gene expression functional in osteoclast differentiation in human septic shockCited by: 10
Author(s): Samanwoy Mukhopadhyay, Pravat Kumar Thatoi, AK Pandey, B. K. Das, Balachandran Ravindran, Samsiddhi Bhattacharjee, Saroj Kant Mohapatra
Software Mentions: 5
Published: over 9 years ago
10.1038/s42003-018-0037-3
The GTPase domain of gamma-tubulin is required for normal mitochondrial function and spatial organizationCited by: 18
Author(s): Lisa Lindström, Tongbin Li, Darina Malycheva, Arun Kancharla, Helén Nilsson, Neelanjan Vishnu, Hindrik Mulder, Martin Johansson, Catalina Ana Rosselló, María Alvarado-Kristensson
Software Mentions: 5
Published: about 8 years ago
10.1186/s13742-016-0134-5
Genome sequence of the olive tree, Olea europaeaCited by: 158
Author(s): Fernando Cruz, Irene Julca, Jèssica Gómez-Garrido, Damian Loska, Marina Marcet‐Houben, Emilio Cano, Beatriz Galán, Leonor Frías, Paolo Ribeca, Sophia Derdak, Marta Gut, Manuel Sánchez-Fernández, José Luis Garcı́a, Pablo Vargas, Tyler Alioto, Toni Gabaldón
Software Mentions: 5
Published: about 10 years ago
10.1371/journal.pone.0229845
A new method for computing the projection median, its influence curve and techniques for the production of projected quantile plotsCited by: 1
Author(s): Fan Chen, Guy P. Nason
Software Mentions: 5
Published: about 6 years ago
10.1186/s13321-019-0399-7
HastaLaVista, a web-based user interface for NMR-based untargeted metabolic profiling analysis in biomedical sciences: towards a new publication standardCited by: 3
Author(s): Julien Wist
Software Mentions: 5
Published: over 6 years ago
10.1017/S0031182020002188
Effects of first intermediate host density, host size and salinity on trematode infections in mussels of the south-western Baltic SeaCited by: 9
Author(s): Claudia Bommarito, David W. Thieltges, Christian Pansch, Francisco R. Barboza, Fabio Pranovi, Martin Wahl
Software Mentions: 5
Published: over 5 years ago
10.1186/s12935-021-02046-z
Upregulation of ARNTL2 is associated with poor survival and immune infiltration in clear cell renal cell carcinomaCited by: 11
Author(s): Song Wang, Xueyou Ma, Yufan Ying, Jiazhu Sun, Zitong Yang, Jiangfeng Li, Ke Jin, Xiao Wang, Bo Xie, Xiangyi Zheng, Ben Liu, Liping Xie
Software Mentions: 5
Published: about 5 years ago
10.3389/fmicb.2018.00675
Gut Microbiota Profiling and Gut–Brain Crosstalk in Children Affected by Pediatric Acute-Onset Neuropsychiatric Syndrome and Pediatric Autoimmune Neuropsychiatric Disorders Associated With Streptococcal InfectionsCited by: 76
Author(s): Andrea Quagliariello, Federica Del Chierico, Alessandra Russo, Sofia Reddel, Giulia Conte, Loris Riccardo Lopetuso, Gianluca Ianiro, Bruno Dallapiccola, Francesco Cardona, Antonio Gasbarrini, Lorenza Putignani
Software Mentions: 5
Published: over 8 years ago
10.1186/s40168-019-0622-9
A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiome’s link to Pseudocapillaria tomentosa infection and pathologyCited by: 62
Author(s): Christopher A. Gaulke, Maurício Laterça Martins, Virginia Watral, Ian R. Humphreys, Sean Spagnoli, Michael L. Kent, Thomas J. Sharpton
Software Mentions: 5
Published: over 7 years ago
10.3390/nu13020432
Is Serum BDNF Altered in Acute, Short- and Long-Term Recovered Restrictive Type Anorexia Nervosa?Cited by: 6
Author(s): Jonas L Steinhäuser, Joseph A. King, Friederike I. Tam, Maria Seidel, Ronald Biemann, Marie‐Louis Wronski, Daniel Geisler, Veit Roessner, Stefan Ehrlich
Software Mentions: 5
Published: over 5 years ago
10.26508/lsa.202000864
Different mutant RUNX1 oncoproteins program alternate haematopoietic differentiation trajectoriesCited by: 12
Author(s): Sophie G Kellaway, Peter Keane, Benjamin Edginton-White, Kakkad Regha, Ella Kennett, Constanze Bonifer
Software Mentions: 5
Published: over 5 years ago
10.3389/fcell.2021.634697
A Combined Two-mRNA Signature Associated With PD-L1 and Tumor Mutational Burden for Prognosis of Lung AdenocarcinomaCited by: 12
Author(s): Congkuan Song, Zhi‐Quan Wu, Qingwen Wang, Yujin Wang, Zixin Guo, Sheng Li, Weidong Hu
Software Mentions: 5
Published: over 5 years ago
10.1098/rspb.2021.0275
Multi-level social organization and nest-drifting behaviour in a eusocial insectCited by: 0
Author(s): Thibault Lengronne, David T. Mlynski, Solenn Patalano, Richard James, Laurent Keller, Seirian Sumner
Software Mentions: 5
Published: about 5 years ago
10.1186/s12866-020-02076-z
Highly abundant core taxa in the blow within and across captive bottlenose dolphins provide evidence for a temporally stable airway microbiotaCited by: 5
Author(s): Catharina Vendl, Tiffanie M. Nelson, Belinda C. Ferrari, Torsten Thomas, Tracey L. Rogers
Software Mentions: 5
Published: over 5 years ago
10.1186/s13036-018-0112-9
Machine learning analysis of microbial flow cytometry data from nanoparticles, antibiotics and carbon sources perturbed anaerobic microbiomesCited by: 10
Author(s): Abhishek S. Dhoble, Pratik Lahiri, Kaustubh Bhalerao
Software Mentions: 5
Published: almost 8 years ago
10.3389/fonc.2021.664346
Total Lesion Glycolysis Estimated by a Radiomics Model From CT Image AloneCited by: 1
Author(s): Hongwei Si, Xinzhong Hao, Lianyu Zhang, Xin Xu, Jianzhong Cao, Ping Wu, Li Li, Zhiyong Wu, Shengyang Zhang, Sijin Li
Software Mentions: 5
Published: about 5 years ago
10.3389/fgene.2019.00770
Maternal Smoking During Pregnancy Induces Persistent Epigenetic Changes Into Adolescence, Independent of Postnatal Smoke Exposure and Is Associated With Cardiometabolic RiskCited by: 65
Author(s): Sebastian Rauschert, Phillip E. Melton, Graham C. Burdge, Jeffrey M. Craig, Keith M. Godfrey, Joanna D. Holbrook, Karen A. Lillycrop, Trevor A. Mori, Lawrence J. Beilin, Wendy H. Oddy, Craig E. Pennell, Rae‐Chi Huang
Software Mentions: 5
Published: almost 7 years ago
10.1093/aobpla/plab054
A sophisticated case of division of labour in the trimorphic stamens of the <i>Cassia fistula</i> (Leguminosae) flowerCited by: 8
Author(s): Gabriella da Silva Saab, Vidal de Freitas Mansano, Anselmo Nogueira, Isabele Carvalho Maia, Pedro Joaquim Bergamo, Juliana Villela Paulino
Software Mentions: 5
Published: almost 5 years ago
10.1186/1471-2229-12-106
Genome-wide analysis of the MYB transcription factor superfamily in soybeanCited by: 320
Author(s): Hongwu Du, Sisi Yang, Zhe Liang, Bo-Run Feng, Lei Liu, Yubi Huang, Yixiong Tang
Software Mentions: 5
Published: about 14 years ago
10.1002/ece3.6662
Major histocompatibility complex variation is similar in little brown bats before and after white‐nose syndrome outbreakCited by: 3
Author(s): Xueling Yi, Deahn M. Donner, Paula E. Marquardt, Jonathan M. Palmer, Michelle A. Jusino, Jacqueline L. Frair, Daniel L. Lindner, Emily K. Latch
Software Mentions: 5
Published: almost 6 years ago
10.3390/nu12082308
Plasma Metabolites Related to Peripheral and Hepatic Insulin Sensitivity Are Not Directly Linked to Gut Microbiota CompositionCited by: 6
Author(s): Annefleur M. Koopen, Nicolien C. de Clercq, Moritz V. Warmbrunn, Hilde Herrema, Mark Davids, Pieter F. de Groot, Ruud S. Kootte, Kristien E. Bouter, Max Nieuwdorp, Albert K. Groen, Andrei Prodan
Software Mentions: 5
Published: almost 6 years ago
10.3390/nu11102348
Specific Wheat Fractions Influence Hepatic Fat Metabolism in Diet-Induced Obese MiceCited by: 6
Author(s): Daniela Gräf, Karolin Weitkunat, Andreas Dötsch, Gerhard Liebisch, Maik Döring, Ralf Krüger, Elisabeth Vatareck, Elena von Coburg, Gunnar Loh, Bernhard Watzl
Software Mentions: 5
Published: almost 7 years ago
10.1038/s41598-018-37679-0
Acidogenesis, solventogenesis, metabolic stress response and life cycle changes in Clostridium beijerinckii NRRL B-598 at the transcriptomic levelCited by: 46
Author(s): Petra Patáková, Barbora Branská, Karel Sedlář, Maryna Vasylkivska, Katerina Jureckova, Jan Kolek, Pavlína Koščová, Ivo Provazník
Software Mentions: 5
Published: over 7 years ago
10.1186/s12889-018-5901-z
An exploratory analysis of missing data from the Royal Bank of Canada (RBC) Learn to Play – Canadian Assessment of Physical Literacy (CAPL) projectCited by: 7
Author(s): Christine Delisle Nyström, Joel D. Barnes, Mark S. Tremblay
Software Mentions: 5
Published: almost 8 years ago
10.3390/nu13093013
Composition of the Gut Microbiome Influences Production of Sulforaphane-Nitrile and Iberin-Nitrile from Glucosinolates in Broccoli SproutsCited by: 11
Author(s): John A. Bouranis, Laura M. Beaver, Jaewoo Choi, Carmen P. Wong, Duo Jiang, Thomas J. Sharpton, Jan F. Stevens, Emily Ho
Software Mentions: 5
Published: almost 5 years ago
10.1186/s13059-017-1285-0
Chromosome contacts in activated T cells identify autoimmune disease candidate genesCited by: 66
Author(s): Oliver S. Burren, Arcadio Rubio Garćıa, Biola M. Javierre, Daniel B. Rainbow, Jonathan Cairns, Nicholas Cooper, John Lambourne, Ellen Schofield, Xaquín Castro Dopico, Ricardo C. Ferreira, Richard M. R. Coulson, Frances Burden, Sophia Rowlston, Kate Downes, Steven W. Wingett, Mattia Frontini, Willem H. Ouwehand, Peter Fraser, Mikhail Spivakov, John A. Todd, Linda S. Wicker, Antony J. Cutler, Chris Wallace
Software Mentions: 5
Published: almost 9 years ago
10.1186/s40249-017-0352-9
The dengue preface to endemic in mainland China: the historical largest outbreak by Aedes albopictus in Guangzhou, 2014Cited by: 51
Author(s): Lei Luo, Liyun Jiang, Xue Xiao, Biao Di, Qinlong Jing, Shengyong Wang, Jin‐Ling Tang, Ming Wang, Xiaoping Tang, Zhicong Yang
Software Mentions: 5
Published: almost 9 years ago
10.3390/s20164501
Benchmark-Based Reference Model for Evaluating Botnet Detection Tools Driven by Traffic-Flow AnalyticsCited by: 17
Author(s): Katherinne Shirley Huancayo Ramos, Marco Antonio Sotelo Monge, Jorge Maestre Vidal
Software Mentions: 5
Published: almost 6 years ago
10.3390/ijms21176033
Identification of Novel Targets of Knee Osteoarthritis Shared by Cartilage and Synovial TissueCited by: 8
Author(s): Chenshuang Li, Zhong Zheng
Software Mentions: 5
Published: almost 6 years ago
10.3389/fmicb.2018.01128
Sediment Depth-Dependent Spatial Variations of Bacterial Communities in Mud Deposits of the Eastern China Marginal SeasCited by: 23
Author(s): Yanlu Qiao, Jiwen Liu, Meixun Zhao, Xiaohua Zhang
Software Mentions: 5
Published: about 8 years ago
10.1016/j.celrep.2019.07.039
Activation and In Vivo Evolution of the MAIT Cell Transcriptome in Mice and Humans Reveals Tissue Repair FunctionalityCited by: 130
Author(s): Timothy S C Hinks, Emanuele Marchi, Maisha Jabeen, Moshe Olshansky, Ayako Kurioka, Troi Pediongco, Bronwyn S. Meehan, Lyudmila Kostenko, Stephen J. Turner, Alexandra J. Corbett, Zhenjun Chen, Paul Klenerman, James McCluskey
Software Mentions: 5
Published: almost 7 years ago
10.1186/1756-0500-5-596
MetabR: an R script for linear model analysis of quantitative metabolomic dataCited by: 30
Author(s): Ben Ernest, Jessica Gooding, Shawn R. Campagna, Arnold M. Saxton, Brynn H. Voy
Software Mentions: 5
Published: over 13 years ago
10.1038/s41598-018-33234-z
Low dose dimethyl sulfoxide driven gross molecular changes have the potential to interfere with various cellular processesCited by: 65
Author(s): Sinem Tunçer, Rafig Gurbanov, Ilir Sheraj, Ege Solel, Okan Esentürk, Sreeparna Banerjee
Software Mentions: 5
Published: almost 8 years ago
10.1186/s13073-021-00924-9
The host transcriptional response to Candidemia is dominated by neutrophil activation and heme biosynthesis and supports novel diagnostic approachesCited by: 8
Author(s): Julie M. Steinbrink, Rachel A. Myers, Kaiyuan Hua, Melissa D. Johnson, Jessica Seidelman, Ephraim L. Tsalik, Ricardo Henao, Geoffrey S. Ginsburg, Christopher W. Woods, Barbara D. Alexander, Micah T. McClain
Software Mentions: 5
Published: about 5 years ago
10.3390/nu12092610
Differences in Gut Microbiome Composition between Senior Orienteering Athletes and Community-Dwelling Older AdultsCited by: 21
Author(s): Frida Fart, Sukithar Rajan, Rebecca Wall, Ignacio Rangel, John Peter Ganda-Mall, Lina Tingö, Robert Jan Brummer, Dirk Repsilber, Ida Schoultz, Carl Mårten Lindqvist
Software Mentions: 5
Published: almost 6 years ago
10.1371/journal.pcbi.1002228
Comparative Microbial Modules Resource: Generation and Visualization of Multi-species BiclustersCited by: 7
Author(s): Thadeous J. Kacmarczyk, Peter Waltman, Ashley R. Bate, Patrick Eichenberger, Richard Bonneau
Software Mentions: 5
Published: over 14 years ago
10.1186/1471-2164-15-704
Establishment and analysis of a reference transcriptome for Spodoptera frugiperdaCited by: 26
Author(s): Fabrice Legeai, Sylvie Gimenez, Bernard Duvic, Jean-Michel Escoubas, Anne-Sophie Gosselin-Grenet, Florence Blanc, Clément François, Imène Séninet, Anthony Bretaudeau, Doriane Mutuel, Pierre-Alain Girard, Christelle Monsempès, Ghislaine Magdelenat, Frédérique Hilliou, René Feyereisen, Mylène Ogliastro, Anne-Nathalie Volkoff, Emmanuelle Jacquin‐Joly, Emmanuelle d’Alençon, Nicolas Nègre, Philippe Fournier
Software Mentions: 5
Published: almost 12 years ago
10.1186/1471-2105-13-30
ICGE: an R package for detecting relevant clusters and atypical units in gene expressionCited by: 7
Author(s): Itziar Irigoien, Basilio Sierra, C. Arenas
Software Mentions: 5
Published: over 14 years ago
10.3389/fmolb.2021.621232
Six Metabolism Related mRNAs Predict the Prognosis of Patients With Hepatocellular CarcinomaCited by: 6
Author(s): Xiwen Wu, Tian Lan, Muqi Li, Junfeng Liu, Xukun Wu, Shunli Shen, Wei Chen, Baogang Peng
Software Mentions: 5
Published: over 5 years ago
10.1038/s41598-020-60564-8
16S rRNA gene sequencing reveals an altered composition of the gut microbiota in chickens infected with a nephropathogenic infectious bronchitis virusCited by: 10
Author(s): Puzhi Xu, Yan Shi, Ping Liu, Yulin Yang, Changming Zhou, Guyue Li, Junrong Luo, Caiying Zhang, Cao H, Guoliang Hu, Xiaomin Guo
Software Mentions: 5
Published: over 6 years ago
10.3390/nu12041081
Response of the Human Milk Microbiota to a Maternal Prebiotic Intervention Is Individual and Influenced by Maternal AgeCited by: 10
Author(s): Marina Padilha, Asker Brejnrod, Niels Banhos Danneskiold‐Samsøe, Christian Hoffmann, Julia de Melo Iaucci, Vanessa Pereira Cabral, Douglas Xavier-Santos, Carla Romano Taddei, Karsten Kristiansen, Susana Marta Isay Saad
Software Mentions: 5
Published: over 6 years ago
10.1093/bioinformatics/btx179
<i>Fuento</i>: functional enrichment for bioinformaticsCited by: 5
Author(s): David Tobias Weichselbaum, Bojan Žagrović, Anton A. Polyansky
Software Mentions: 5
Published: over 9 years ago
10.3389/fonc.2021.633950
Identification of a Novel Glycolysis-Related Gene Signature Correlates With the Prognosis and Therapeutic Responses in Patients With Clear Cell Renal Cell CarcinomaCited by: 13
Author(s): Zhengtong Lv, Qi Lin, Xiheng Hu, Miao Mo, Huichuan Jiang, Yuan Li
Software Mentions: 5
Published: over 5 years ago
10.3389/fonc.2021.670927
Influence of Different Age Cutoff Points on the Prediction of Prognosis of Cancer Patients Receiving ICIs and Potential Mechanistic ExplorationCited by: 5
Author(s): Rui Guan, Qiong Lyu, Anqi Lin, Junyi Liang, Weimin Ding, Manming Cao, Peng Luo, Jian Zhang
Software Mentions: 5
Published: about 5 years ago
10.7554/eLife.59404
Massively multiplex single-molecule oligonucleosome footprintingCited by: 41
Author(s): Nour J. Abdulhay, Christopher A. McNally, Laura J Hsieh, Sivakanthan Kasinathan, Aidan M. Keith, Laurel S Estes, Mehran Karimzadeh, Jason G. Underwood, Hani Goodarzi, Geeta J. Narlikar, Vijay Ramani
Software Mentions: 5
Published: over 5 years ago
10.7554/eLife.63324
Adipocyte NR1D1 dictates adipose tissue expansion during obesityCited by: 20
Author(s): Louise Hunter, Charlotte E Pelekanou, Nichola J Barron, Rebecca C Northeast, M Grudzień, Antony Adamson, Polly Downton, Thomas Cornfield, Peter Cunningham, Jean-Noël Billaud, Leanne Hodson, Andrew S. I. Loudon, Richard D. Unwin, Mudassar Iqbal, David Ray, David A. Bechtold
Software Mentions: 5
Published: almost 5 years ago
10.1038/s41598-018-27027-7
Immunoprofiles of human Sertoli cells infected with Zika virus reveals unique insights into host-pathogen crosstalkCited by: 32
Author(s): Daniel P. Strange, Richard Green, Dietmar W. Siemann, Michael Gale, Saguna Verma
Software Mentions: 5
Published: about 8 years ago
10.18632/oncotarget.25218
Comprehensive identification of long noncoding RNAs in colorectal cancerCited by: 15
Author(s): Eric James de Bony, Martin Bizet, Olivier Van Grembergen, Bouchra Hassabi, Emilie Calonne, Pascale Putmans, Gianluca Bontempi, François Fuks
Software Mentions: 5
Published: about 8 years ago
10.3389/fonc.2020.00669
Identifying Predictive Gene Expression and Signature Related to Temozolomide Sensitivity of GlioblastomasCited by: 16
Author(s): Hong‐Qing Cai, Ang-Si Liu, Minjie Zhang, Hou-Jie Liu, Xiaoli Meng, Hai-Peng Qian, Jinghai Wan
Software Mentions: 5
Published: about 6 years ago
10.1038/s41416-018-0292-6
Smoking cessation sharply reduced lung cancer mortality in a historical cohort of 3185 Chinese silicotic workers from 1981 to 2014Cited by: 10
Author(s): Lap Ah Tse, Xiaona Lin, Wentao Li, Hong Qiu, Chi Kuen Chan, Feng Wang, Ignatius Tak-sun Yu, Chi Chiu Leung
Software Mentions: 5
Published: over 7 years ago
10.1128/mBio.01193-19
Determination of an Interaction Network between an Extracellular Bacterial Pathogen and the Human HostCited by: 23
Author(s): Brad Griesenauer, Tuan M. Tran, Kate R. Fortney, Diane M. Janowicz, Paula A. Johnson, Hongyu Gao, Stephen Barnes, Landon Wilson, Yunlong Liu, Stanley M. Spinola
Software Mentions: 5
Published: about 7 years ago
10.1186/s12935-021-01829-8
Identification of key genes involved in tumor immune cell infiltration and cetuximab resistance in colorectal cancerCited by: 4
Author(s): Li Liang, Mengling Liu, Xun Sun, Yunfeng Yuan, Ke Peng, Khalid Rashid, Yiyi Yu, Yuehong Cui, Yanjie Chen, Tianshu Liu
Software Mentions: 5
Published: over 5 years ago
10.1038/s41598-020-61216-7
A single polyploidization event at the origin of the tetraploid genome of Coffea arabica is responsible for the extremely low genetic variation in wild and cultivated germplasmCited by: 72
Author(s): Simone Scalabrin, Lucile Toniutti, Gabriele Di Gaspero, Davide Scaglione, Gabriele Magris, Michele Vidotto, Sara Pinosio, Frederica Cattonaro, Federica Magni, Irena Jurman, Mario Cerutti, F. S. Liverani, Luciano Navarini, Lorenzo Del Terra, Gloria Pellegrino, Manuela Rosanna Ruosi, Nicola Vitulo, Giorgio Valle, Alberto Pallavicini, G. Graziosi, Patricia E. Klein, Nolan Bentley, Seth C. Murray, William Solano, Amin Al Hakimi, Timothy Schilling, Christophe Montagnon, Michèle Morgante, Benoît Bertrand
Software Mentions: 5
Published: over 6 years ago
10.1186/s13613-021-00875-9
Acute kidney injury in SARS-CoV2-related pneumonia ICU patients: a retrospective multicenter studyCited by: 15
Author(s): Guillaume Géri, Michaël Darmon, Lara Zafrani, Muriel Fartoukh, Guillaume Voiriot, Julien Le Marec, Saafa Nemlaghi, Antoine Vieillard‐Baron, Élie Azoulay
Software Mentions: 5
Published: about 5 years ago
10.3389/fmolb.2021.689037
Analyzing and Validating the Prognostic Value of a TNF-Related Signature in Kidney Renal Clear Cell CarcinomaCited by: 5
Author(s): Wenhao Zhang, Chang-Jiu Li, Fanding Wu, Ning Li, Yuwei Wang, Yixuan Hu, Tiantian Fang, Yuan Hui, Honghua He
Software Mentions: 5
Published: about 5 years ago
10.1038/s41419-021-03450-z
ECT2 overexpression promotes the polarization of tumor-associated macrophages in hepatocellular carcinoma via the ECT2/PLK1/PTEN pathwayCited by: 26
Author(s): Dafeng Xu, Yu Wang, Junzhen Wu, Zhensheng Zhang, Jiacheng Chen, Mingwei Xie, Rong Tang, Cheng Chen, Liang Chen, Shaomin Lin, Xiangxiang Luo, Jinfang Zheng
Software Mentions: 5
Published: over 5 years ago
10.1002/ece3.7746
Black Scoter habitat use along the southeastern coast of the United StatesCited by: 0
Author(s): Hannah M. Plumpton, Emily Silverman, Beth E. Ross
Software Mentions: 5
Published: almost 5 years ago
10.1590/0074-02760180598
Novel molecular evidence of population structure in Anopheles (Kerteszia) bellator from Brazilian Atlantic ForestCited by: 1
Author(s): Kamila Voges, Marcela Possato Correa da Rosa, Betina Westphal-Ferreira, Mário Antônio Navarro-Silva, Carime Lessa Mansur Pontes, André Nóbrega Pitaluga, Carlos José de Carvalho-Pinto, Luísa D P Rona
Software Mentions: 5
Published: over 7 years ago
10.1371/journal.pgen.1005819
Strong Components of Epigenetic Memory in Cultured Human Fibroblasts Related to Site of Origin and Donor AgeCited by: 21
Author(s): Н. А. Иванов, Ran Tao, Joshua G. Chenoweth, Anna C. Brandtjen, Michelle I. Mighdoll, John D. Genova, Ronald D.G. McKay, Yankai Jia, Daniel R. Weinberger, Joel E. Kleinman, Thomas M. Hyde, Andrew E. Jaffe
Software Mentions: 5
Published: over 10 years ago
10.3389/fmolb.2021.624575
Identification of Radiotherapy-Associated Genes in Lung Adenocarcinoma by an Integrated Bioinformatics Analysis ApproachCited by: 7
Author(s): Junhao Wang, Qizheng Han, Huizi Liu, Haihua Luo, Lei Li, Aihua Liu, Yong Jiang
Software Mentions: 5
Published: about 5 years ago
10.1186/s12864-017-4007-9
Equine skeletal muscle adaptations to exercise and training: evidence of differential regulation of autophagosomal and mitochondrial componentsCited by: 28
Author(s): Kenneth Bryan, Beatrice A. McGivney, Gabriella Farries, Paul A. McGettigan, C. L. McGivney, K. F. Gough, David E. MacHugh, Lisa Katz, Emmeline W. Hill
Software Mentions: 5
Published: almost 9 years ago
10.7554/eLife.27014
Regulation of life span by the gut microbiota in the short-lived African turquoise killifishCited by: 262
Author(s): Patrick M. Smith, David Willemsen, Miriam Popkes, Franziska Metge, Edson Gandiwa, Martin Reichard, Dario Riccardo Valenzano
Software Mentions: 5
Published: almost 9 years ago
10.1371/journal.pgen.1009213
Gene regulatory effects of a large chromosomal inversion in highland maizeCited by: 38
Author(s): Taylor M. Crow, James Ta, Saghi Nojoomi, M. Rocío Aguilar-Rangel, Jorge Vladimir Torres Rodríguez, David M. Gates, Rubén Rellán‐Álvarez, Ruairidh J. H. Sawers, Daniel E. Runcie
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.pone.0206844
Clustering-local-unique-enriched-signals (CLUES) promotes identification of novel regulators of ES cell self-renewal and pluripotencyCited by: 1
Author(s): Chao Wu, Jiao Yang, Minhong Shen, Ci Pan, Cheng Guo, Danmei Jia, Jing Zhu, Long Zhang, Min Zheng, Junling Jia
Software Mentions: 5
Published: over 7 years ago
10.1038/s41598-020-68487-0
Variations in foliar carbon:nitrogen and nitrogen:phosphorus ratios under global change: a meta-analysis of experimental field studiesCited by: 15
Author(s): Shan Xu, Jordi Sardans, Jinlong Zhang, Josep Peñuelas
Software Mentions: 5
Published: almost 6 years ago
10.1371/journal.pone.0252862
Approaches to measure class importance in Knowledge GraphsCited by: 2
Author(s): Daniel Fernández-Álvarez, Johannes Frey, José Emilio Labra Gayo, Daniel Gayo-Avello, Sebastian Hellmann
Software Mentions: 5
Published: about 5 years ago
10.3390/cancers12082261
MiR-302b as a Combinatorial Therapeutic Approach to Improve Cisplatin Chemotherapy Efficacy in Human Triple-Negative Breast CancerCited by: 12
Author(s): Alessandra Cataldo, Sandra Romero-Córdoba, Ilaria Plantamura, Giulia Cosentino, Alfredo Hidalgo‐Miranda, Elda Tagliabue, Marilena V. Iorio
Software Mentions: 5
Published: almost 6 years ago
10.3389/fcell.2021.673295
Overexpression of PLXDC2 in Stromal Cell-Associated M2 Macrophages Is Related to EMT and the Progression of Gastric CancerCited by: 15
Author(s): Yihan Guan, Yuzhang Du, Guanzheng Wang, Hongquan Gou, Yuezhen Xue, Jingsong Xu, Enhao Li, David W. Chan, Di Wu, Peiqing Xu, Peihong Ni, Dakang Xu, Yiqun Hu
Software Mentions: 5
Published: about 5 years ago