Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cancers12103054

https://doi.org/10.3390/cancers12103054

A Methylation-Based Reclassification of Bladder Cancer Based on Immune Cell Genes

Cited by: 26
Author(s): Qizhan Luo, Thomas-Alexander Vögeli
Published: about 4 years ago

Software Mentions 5

bioconductor: GSEABase

Gene set enrichment data structures and methods
Papers that mentioned: 79

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: maftools

Summarize, Analyze and Visualize MAF Files
Papers that mentioned: 288

cran: sparcl

Perform Sparse Hierarchical Clustering and Sparse K-Means Clustering
Papers that mentioned: 12

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893