Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-020-61216-7

https://doi.org/10.1038/s41598-020-61216-7

A single polyploidization event at the origin of the tetraploid genome of Coffea arabica is responsible for the extremely low genetic variation in wild and cultivated germplasm

Cited by: 72
Author(s): Simone Scalabrin, Lucile Toniutti, Gabriele Di Gaspero, Davide Scaglione, Gabriele Magris, Michele Vidotto, Sara Pinosio, Frederica Cattonaro, Federica Magni, Irena Jurman, Mario Cerutti, F. S. Liverani, Luciano Navarini, Lorenzo Del Terra, Gloria Pellegrino, Manuela Rosanna Ruosi, Nicola Vitulo, Giorgio Valle, Alberto Pallavicini, G. Graziosi, Patricia E. Klein, Nolan Bentley, Seth C. Murray, William Solano, Amin Al Hakimi, Timothy Schilling, Christophe Montagnon, Michèle Morgante, Benoît Bertrand
Published: over 4 years ago

Software Mentions 5

cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: poppr
Genetic Analysis of Populations with Mixed Reproduction
Papers that mentioned: 251
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: msprime
Simulate genealogical trees and genomic sequence data using population genetic models
Papers that mentioned: 48